Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0732.Seq
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 84 7e-17
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 84 7e-17
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 75 5e-14
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 30 1.3
AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical ... 30 1.7
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 29 2.2
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 27 9.0
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 84.2 bits (199), Expect = 7e-17
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +1
Query: 256 HKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKPP-VFTRDGKKWLIEYQKGNSNLVVE 432
HKNP LR G A A A+ P A + KPP +GK+W++EY + N+V++
Sbjct: 1066 HKNPNLR-GTAVVPAAGASQGGSSPAKPAAPVRKPPHKELENGKQWIVEYFVNDPNIVLD 1124
Query: 433 NADMNNVVYMFRCRDSALTVRGKVNGSCWTRAPSAXXXXXXXXXXXXXXXXXXXXXXYLG 612
AD VY++RC +S + V GK N LG
Sbjct: 1125 VADKKQTVYIYRCENSVIKVNGKANSITLDGCKKTSVVFDALVAQCETVNCQSVQIQTLG 1184
Query: 613 KVPTVSIDKTDGCQIYL 663
++PT+SI KTDGCQ+YL
Sbjct: 1185 ELPTLSIQKTDGCQVYL 1201
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 3 WVQLLSDLQAYVKQFHTTGLVW-SGKGSA 86
W + ++Q +V+Q HTTGLVW S G+A
Sbjct: 959 WKAVFEEMQKFVRQVHTTGLVWNSAPGAA 987
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 84.2 bits (199), Expect = 7e-17
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +1
Query: 256 HKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKPP-VFTRDGKKWLIEYQKGNSNLVVE 432
HKNP LR G A A A+ P A + KPP +GK+W++EY + N+V++
Sbjct: 305 HKNPNLR-GTAVVPAAGASQGGSSPAKPAAPVRKPPHKELENGKQWIVEYFVNDPNIVLD 363
Query: 433 NADMNNVVYMFRCRDSALTVRGKVNGSCWTRAPSAXXXXXXXXXXXXXXXXXXXXXXYLG 612
AD VY++RC +S + V GK N LG
Sbjct: 364 VADKKQTVYIYRCENSVIKVNGKANSITLDGCKKTSVVFDALVAQCETVNCQSVQIQTLG 423
Query: 613 KVPTVSIDKTDGCQIYL 663
++PT+SI KTDGCQ+YL
Sbjct: 424 ELPTLSIQKTDGCQVYL 440
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 3 WVQLLSDLQAYVKQFHTTGLVW-SGKGSA 86
W + ++Q +V+Q HTTGLVW S G+A
Sbjct: 198 WKAVFEEMQKFVRQVHTTGLVWNSAPGAA 226
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/136 (30%), Positives = 60/136 (44%)
Frame = +1
Query: 256 HKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKPPVFTRDGKKWLIEYQKGNSNLVVEN 435
HKNP LR+ + K ++ + +F DGK W +++Q GN N VVE
Sbjct: 268 HKNPVLREVNGQMNRKTEE-RKVSENKKPEKIHESSIFW-DGKIWKVDHQVGNKNAVVEV 325
Query: 436 ADMNNVVYMFRCRDSALTVRGKVNGSCWTRAPSAXXXXXXXXXXXXXXXXXXXXXXYLGK 615
D +Y+++C DS + ++GK N LG+
Sbjct: 326 TDKKESIYIYKCNDSIIKIKGKANAITLDGCRKTSVVFDGLVAQCEIINCQSIQIQTLGE 385
Query: 616 VPTVSIDKTDGCQIYL 663
+PTVSI KTDGC IYL
Sbjct: 386 LPTVSIQKTDGCHIYL 401
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 9 QLLSDLQAYVKQFHTTGLVWSGKGSA 86
+L+ L YV+Q HTTGLVW+ A
Sbjct: 183 ELMLSLHEYVRQHHTTGLVWNSDPGA 208
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Frame = +1
Query: 49 TQQDLCGLARAVLVHPHRLPREDFP-LRRPCCQTWTSPTCRSMTAALSSPKSIEAKHN*L 225
T++D GL + +H ++ P DF + + + + A S P S + H
Sbjct: 344 TEKDSFGLLNSTKIHRNQFPTSDFETIAQATAERKKALLGAQGAAGASEPGSSSSIHGKK 403
Query: 226 -LAQSEAGHADHKNPTLRQGPAPFKATSAAGHK----PLPQPGAGQLDKPP 363
E K ++++ A +A ++AG P P P A +L PP
Sbjct: 404 GKTVRELQTEMMKGESVKEKAARMRAEASAGRSQAPGPAPAPAASELQDPP 454
>AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical
protein F23H11.2 protein.
Length = 865
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = -3
Query: 647 PSVLSMETVGTLPKYLHL--YGLAVD--ELDAGYEVVEHDRA-LGARVQHDPLTFPRTVR 483
P+ +S + TLP + GL + +++A V+ R LG ++ DPLTF R
Sbjct: 578 PTEMSFNSTSTLPTVFDVRHMGLLTERCQMEALISPVKFQRTVLGNEIERDPLTFENVDR 637
Query: 482 AESRQRNMYTTLFMSAFSTTK 420
+ +N + F SAF TT+
Sbjct: 638 ---QSKNTFFKHF-SAFKTTE 654
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 462 VPLSRLRPDGPREGQRVVLDSCTKCAVVFDNLVSSIEFVN 581
+PLSR P+ ++D+ KC + ++L SSIEF+N
Sbjct: 317 IPLSR----NPKNQNFELIDTINKCMLELEDLNSSIEFLN 352
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 469 NGTCTQRCSCPRSRPLNWSCPFGTR*ATSCRPE 371
NG C SCP N +C GT+ T C P+
Sbjct: 596 NGKCVTLASCPDHDHTNITC-LGTQEYTDCMPK 627
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 469 NGTCTQRCSCPRSRPLNWSCPFGTR*ATSCRPE 371
NG C SCP N +C GT+ T C P+
Sbjct: 661 NGKCVTLASCPDHDHTNITC-LGTQEYTDCMPK 692
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 459 HVPLSRLRPDGPREGQRVVLDSCTKCAVVFDNLVSSIEFVNCQSVQM-QVFGQSSNRF 629
H + L DG ++VV+DS KC V DN + N Q+ ++ +FG S ++
Sbjct: 125 HFKVENLSIDGLIAIKQVVIDSGRKCKAVIDNSNGN----NLQNQELTNIFGDSIEKY 178
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 459 HVPLSRLRPDGPREGQRVVLDSCTKCAVVFDNLVSSIEFVNCQSVQM-QVFGQSSNRF 629
H + L DG ++VV+DS KC V DN + N Q+ ++ +FG S ++
Sbjct: 125 HFKVENLSIDGLIAIKQVVIDSGRKCKAVIDNSNGN----NLQNQELTNIFGDSIEKY 178
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 459 HVPLSRLRPDGPREGQRVVLDSCTKCAVVFDNLVSSIEFVNCQSVQM-QVFGQSSNRF 629
H + L DG ++VV+DS KC V DN + N Q+ ++ +FG S ++
Sbjct: 125 HFKVENLSIDGLIAIKQVVIDSGRKCKAVIDNSNGN----NLQNQELTNIFGDSIEKY 178
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 459 HVPLSRLRPDGPREGQRVVLDSCTKCAVVFDNLVSSIEFVNCQSVQM-QVFGQSSNRF 629
H + L DG ++VV+DS KC V DN + N Q+ ++ +FG S ++
Sbjct: 125 HFKVENLSIDGLIAIKQVVIDSGRKCKAVIDNSNGN----NLQNQELTNIFGDSIEKY 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,650,070
Number of Sequences: 27780
Number of extensions: 299154
Number of successful extensions: 1076
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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