Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0731.Seq
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   7.2  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.2  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.2  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   7.2  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 628 PAILQAAFLANGWSRRQGSTNGSL 699
           P I +++ +   WS R+  TNG +
Sbjct: 463 PTITRSSSMFPDWSARENGTNGGI 486


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = -1

Query: 635 MAGVSGLQNDWR-----TLLQRQPTVDRTT 561
           MAG++GL + W      T L+ Q T D  T
Sbjct: 724 MAGINGLSSSWHKVLDSTQLRLQSTTDNAT 753


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 503 TSKMTHFVKPVQLPGLVGQLLFYQQSVAAGGAYA 604
           T  + +   P+ +PG      FYQQ+ A   A A
Sbjct: 34  TDSVMNSYPPMGVPGSASIAQFYQQAAAVSAASA 67


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 664 WSRRQGSTNGSLTSGVKS 717
           W+   G+TNG+ T G  S
Sbjct: 110 WNANSGATNGATTGGTGS 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,120
Number of Sequences: 2352
Number of extensions: 15756
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)