Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0731.Seq
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060698-1|AAL28246.1|  356|Drosophila melanogaster GH14075p pro...    32   0.90 
AE014297-3033|AAF55913.2|  693|Drosophila melanogaster CG31177-P...    32   0.90 

>AY060698-1|AAL28246.1|  356|Drosophila melanogaster GH14075p
           protein.
          Length = 356

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
 Frame = -2

Query: 661 HWPKKQ-------LVEWQELVGYKMIGVRSSSGNRLLIEQQ 560
           HWPK Q       L ++ E VGY MI V++  GN+++  +Q
Sbjct: 132 HWPKNQDVDLVDFLTDYTEQVGYPMIIVKALQGNKVVTVEQ 172


>AE014297-3033|AAF55913.2|  693|Drosophila melanogaster CG31177-PA
           protein.
          Length = 693

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
 Frame = -2

Query: 661 HWPKKQ-------LVEWQELVGYKMIGVRSSSGNRLLIEQQ 560
           HWPK Q       L ++ E VGY MI V++  GN+++  +Q
Sbjct: 469 HWPKNQDVDLVDFLTDYTEQVGYPMIIVKALQGNKVVTVEQ 509


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,796,702
Number of Sequences: 53049
Number of extensions: 704548
Number of successful extensions: 2137
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2137
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)