Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0729.Seq
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC092411-1|AAH92411.1| 1263|Homo sapiens regulator of G-protein ...    31   2.9  
BC047060-1|AAH47060.1|  504|Homo sapiens RGS22 protein protein.        31   2.9  
BC036665-1|AAH36665.2| 1264|Homo sapiens regulator of G-protein ...    31   2.9  
AY009106-1|AAG49397.1| 1252|Homo sapiens PRTD-NY2 protein.             31   2.9  
BC006355-1|AAH06355.1|  762|Homo sapiens phospholipase C, delta ...    30   5.0  
AK223203-1|BAD96923.1|  762|Homo sapiens phospholipase C, delta ...    30   5.0  
AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetit...    30   6.6  
AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetit...    30   6.6  

>BC092411-1|AAH92411.1| 1263|Homo sapiens regulator of G-protein
           signaling 22 protein.
          Length = 1263

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -3

Query: 557 IVQRCRTASSQ-RQKQYGSGTNSISTRSRP-WCCDHRWYTLLFGQEFSRFRK 408
           +VQ  +  S +  Q    S   S    SR  WC  HR Y +   +EF RF+K
Sbjct: 368 LVQTTKERSEEIEQTSLSSKNESAGPESRADWCISHRTYDIGNRKEFERFKK 419


>BC047060-1|AAH47060.1|  504|Homo sapiens RGS22 protein protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -3

Query: 557 IVQRCRTASSQ-RQKQYGSGTNSISTRSRP-WCCDHRWYTLLFGQEFSRFRK 408
           +VQ  +  S +  Q    S   S    SR  WC  HR Y +   +EF RF+K
Sbjct: 369 LVQTTKERSEEIEQTSLSSKNESAGPESRADWCISHRTYDIGNRKEFERFKK 420


>BC036665-1|AAH36665.2| 1264|Homo sapiens regulator of G-protein
           signaling 22 protein.
          Length = 1264

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -3

Query: 557 IVQRCRTASSQ-RQKQYGSGTNSISTRSRP-WCCDHRWYTLLFGQEFSRFRK 408
           +VQ  +  S +  Q    S   S    SR  WC  HR Y +   +EF RF+K
Sbjct: 369 LVQTTKERSKEIEQTSLSSKNESAGPESRADWCISHRTYDIGNRKEFERFKK 420


>AY009106-1|AAG49397.1| 1252|Homo sapiens PRTD-NY2 protein.
          Length = 1252

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -3

Query: 557 IVQRCRTASSQ-RQKQYGSGTNSISTRSRP-WCCDHRWYTLLFGQEFSRFRK 408
           +VQ  +  S +  Q    S   S    SR  WC  HR Y +   +EF RF+K
Sbjct: 357 LVQTTKERSEEIEQTSLSSKNESAGPESRADWCISHRTYDIGNRKEFERFKK 408


>BC006355-1|AAH06355.1|  762|Homo sapiens phospholipase C, delta 4
           protein.
          Length = 762

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +2

Query: 230 RDVPGELRHYTLTQRYGCY--DDQLCTQQKTCGG-RIIN--CQYIDSDMWVFPSGD 382
           +D+   L HY +   +  Y   DQLC Q    G  R +   C+ ++ D+W  PSG+
Sbjct: 290 QDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGE 345


>AK223203-1|BAD96923.1|  762|Homo sapiens phospholipase C, delta 4
           variant protein.
          Length = 762

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +2

Query: 230 RDVPGELRHYTLTQRYGCY--DDQLCTQQKTCGG-RIIN--CQYIDSDMWVFPSGD 382
           +D+   L HY +   +  Y   DQLC Q    G  R +   C+ ++ D+W  PSG+
Sbjct: 290 QDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGE 345


>AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = +1

Query: 118 QSRSVQMRPDTTRGR*NVRPSHTSTARLHRERRHMNPQGRARRTAALHADPEVRL----L 285
           +SRS       TR R    PSHT   R HR R    P  R RR +     P  R+     
Sbjct: 277 RSRSRSKSRSRTRSR---SPSHTRPRRRHRSRSRRRPSPR-RRPSPRRRTPPRRMPPPPR 332

Query: 286 RRPALHPAKNLRRQDHQLS 342
            R +  P +  RR    LS
Sbjct: 333 HRRSRSPVRRRRRSSASLS 351


>AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = +1

Query: 118 QSRSVQMRPDTTRGR*NVRPSHTSTARLHRERRHMNPQGRARRTAALHADPEVRL----L 285
           +SRS       TR R    PSHT   R HR R    P  R RR +     P  R+     
Sbjct: 277 RSRSRSKSRSRTRSR---SPSHTRPRRRHRSRSRRRPSPR-RRPSPRRRTPPRRMPPPPR 332

Query: 286 RRPALHPAKNLRRQDHQLS 342
            R +  P +  RR    LS
Sbjct: 333 HRRSRSPVRRRRRSSASLS 351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,957,001
Number of Sequences: 237096
Number of extensions: 2139518
Number of successful extensions: 5654
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5648
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)