Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0728.Seq
(717 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P75785 Cluster: UPF0141 inner membrane protein ybiP; n=... 158 1e-37
UniRef50_UPI00015C5712 Cluster: hypothetical protein CKO_02303; ... 139 7e-32
UniRef50_P75786 Cluster: Putative uncharacterized protein yliL; ... 132 1e-29
UniRef50_Q0TJN2 Cluster: Putative uncharacterized protein; n=1; ... 76 8e-13
UniRef50_Q7N2R5 Cluster: Similar to probable membrane protein Yb... 48 2e-04
UniRef50_A6VN60 Cluster: Sulfatase precursor; n=1; Actinobacillu... 48 2e-04
UniRef50_Q7WUC4 Cluster: Membrane-associated, metal-dependent hy... 39 0.14
UniRef50_Q9RMJ0 Cluster: Dca; n=6; Neisseria|Rep: Dca - Neisseri... 37 0.57
UniRef50_P44974 Cluster: UPF0141 membrane protein HI1005; n=13; ... 36 0.76
UniRef50_Q1ZTU4 Cluster: Predicted PE--lipooligosaccharide phosp... 35 1.7
UniRef50_Q1NST9 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_Q1ZCQ2 Cluster: Predicted PE--lipooligosaccharide phosp... 34 3.0
UniRef50_Q5BIA9 Cluster: RE10908p; n=6; cellular organisms|Rep: ... 33 9.3
UniRef50_P71367 Cluster: UPF0141 membrane protein HI1064; n=23; ... 33 9.3
>UniRef50_P75785 Cluster: UPF0141 inner membrane protein ybiP; n=23;
Enterobacteriaceae|Rep: UPF0141 inner membrane protein
ybiP - Escherichia coli (strain K12)
Length = 527
Score = 158 bits (383), Expect = 1e-37
Identities = 79/96 (82%), Positives = 80/96 (83%)
Frame = -1
Query: 288 LRLPLQFALHRSFTAIXXXXXXXLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLAL 109
L P +FTAI LPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLAL
Sbjct: 34 LGYPFSLLYTAAFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLAL 93
Query: 108 HSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRR 1
HSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRR
Sbjct: 94 HSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRR 129
Score = 94.3 bits (224), Expect = 3e-18
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = -2
Query: 386 MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA 255
MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
Sbjct: 1 MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA 44
>UniRef50_UPI00015C5712 Cluster: hypothetical protein CKO_02303;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_02303 - Citrobacter koseri ATCC BAA-895
Length = 528
Score = 139 bits (336), Expect = 7e-32
Identities = 64/93 (68%), Positives = 73/93 (78%)
Frame = -1
Query: 279 PLQFALHRSFTAIXXXXXXXLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHST 100
P +FT + PR QKVL+G+ SL+AA YFPF QAYG+PNFNTLLALHST
Sbjct: 37 PFSLFYTAAFTCLLLLLWRTSPRAQKVLIGLCSLIAAMYFPFGQAYGSPNFNTLLALHST 96
Query: 99 NMEESTEILTIFPWYSYLVGLFIFALGVIAIRR 1
N+EESTEILTIFPWY+YLVGLFIFALGVIA+RR
Sbjct: 97 NVEESTEILTIFPWYNYLVGLFIFALGVIAVRR 129
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -2
Query: 386 MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA 255
MNLTLK+SL+ RSR SPWT FYFLQSLLINL GYPFSL YTA
Sbjct: 1 MNLTLKDSLIARSRAISPWTGFYFLQSLLINLASGYPFSLFYTA 44
>UniRef50_P75786 Cluster: Putative uncharacterized protein yliL;
n=2; Escherichia coli|Rep: Putative uncharacterized
protein yliL - Escherichia coli (strain K12)
Length = 89
Score = 132 bits (318), Expect = 1e-29
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +3
Query: 531 GQLLTNKSFAKGIANPTKSGVFQTKTRYACMKAGVKRRTATPLFIGRFILLRFVVDHIAQ 710
GQLLTNKSFAKGIANPTKSGVFQTKTRYACMKAGVKRRTATPLFIGRFILLRFVVDHIAQ
Sbjct: 25 GQLLTNKSFAKGIANPTKSGVFQTKTRYACMKAGVKRRTATPLFIGRFILLRFVVDHIAQ 84
Query: 711 HR 716
HR
Sbjct: 85 HR 86
Score = 41.5 bits (93), Expect = 0.020
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 460 VERGPHPRSAIYAGLQEIERAAVQVNY*RTN-LLRRGLQIRQKVGFFRPK 606
+ERGPHPR+AIYAGLQE +RA+ + TN +G+ K G F+ K
Sbjct: 1 MERGPHPRAAIYAGLQE-DRASRRSGQLLTNKSFAKGIANPTKSGVFQTK 49
>UniRef50_Q0TJN2 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli 536|Rep: Putative uncharacterized
protein - Escherichia coli O6:K15:H31 (strain 536 /
UPEC)
Length = 71
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +1
Query: 499 GLQEIERAAVQVNY*RTNLLRRGLQIRQKVGFFRPKRVMPA 621
G ++IERAAVQVNY RTNLLRRGLQIRQKVGFFRPKRV+PA
Sbjct: 31 GCKKIERAAVQVNYRRTNLLRRGLQIRQKVGFFRPKRVVPA 71
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +2
Query: 410 MCLPWRQGSIPARVREEWKGVRIRDPQYTQGCKR 511
MCLPWRQGSIPARVREE KGVRIR+PQYTQGCK+
Sbjct: 1 MCLPWRQGSIPARVREEGKGVRIREPQYTQGCKK 34
>UniRef50_Q7N2R5 Cluster: Similar to probable membrane protein YbiP
of Escherichia coli; n=2; Photorhabdus luminescens
subsp. laumondii|Rep: Similar to probable membrane
protein YbiP of Escherichia coli - Photorhabdus
luminescens subsp. laumondii
Length = 516
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/96 (27%), Positives = 51/96 (53%)
Frame = -1
Query: 291 RLRLPLQFALHRSFTAIXXXXXXXLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLA 112
RL++ FA+ F + P + +++G+++LV Y P YG+PN N++L+
Sbjct: 31 RLKIAYVFAIFFIFLLLNKATVVYRPLL--IILGIATLV---YAPIGLTYGSPNLNSILS 85
Query: 111 LHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIR 4
L TN +E++E ++ P YL I +++++
Sbjct: 86 LFYTNKQEASEFISSIPVEYYLFSALILIFCLLSLK 121
>UniRef50_A6VN60 Cluster: Sulfatase precursor; n=1; Actinobacillus
succinogenes 130Z|Rep: Sulfatase precursor -
Actinobacillus succinogenes 130Z
Length = 517
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -1
Query: 183 SLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGL--FIFALG 19
SL+ + Y P A YG+P+ + +L TNM+ES E L P YSY++ L +F++G
Sbjct: 61 SLICSVYIPEAIFYGSPSVGIIASLFETNMQESWEYLQSLPLYSYVISLLFLLFSVG 117
>UniRef50_Q7WUC4 Cluster: Membrane-associated, metal-dependent
hydrolase; n=9; Escherichia coli|Rep:
Membrane-associated, metal-dependent hydrolase -
Escherichia coli
Length = 514
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 210 VQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFI 31
+ V + L++ACY P YG N + + ++ TN+ E+ E +T P ++V L I
Sbjct: 70 ISATCVCIFLLLSACYVPVGMIYGKINNSFIASVMQTNINEAGEFITGIPVLYFIVSLVI 129
Query: 30 FA 25
A
Sbjct: 130 AA 131
>UniRef50_Q9RMJ0 Cluster: Dca; n=6; Neisseria|Rep: Dca - Neisseria
meningitidis
Length = 548
Score = 36.7 bits (81), Expect = 0.57
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -1
Query: 216 PRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGL 37
PRV V++ + A Y P YGAP++ + ++ +N E+ E + P Y V
Sbjct: 66 PRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSILESNPAEAREFVGDLPGSLYFVQA 125
Query: 36 FIFALGV 16
F G+
Sbjct: 126 LFFIFGL 132
>UniRef50_P44974 Cluster: UPF0141 membrane protein HI1005; n=13;
Haemophilus influenzae|Rep: UPF0141 membrane protein
HI1005 - Haemophilus influenzae
Length = 519
Score = 36.3 bits (80), Expect = 0.76
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = -1
Query: 216 PRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGL 37
P + ++L+ V L A Y YG P+ + +++ TN+ E+ E T P++ +L
Sbjct: 58 PWLGRILITVLFLSALFYCSAGFFYGIPSLGIIASVYETNINETLEYYTTIPFWIFLFQA 117
Query: 36 FIFALGVIAIR 4
F L V ++
Sbjct: 118 SYFILFVALMK 128
>UniRef50_Q1ZTU4 Cluster: Predicted PE--lipooligosaccharide
phosphorylethanolamine transferase; n=1; Vibrio angustum
S14|Rep: Predicted PE--lipooligosaccharide
phosphorylethanolamine transferase - Vibrio angustum S14
Length = 469
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -1
Query: 180 LVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILT-----IFPW-YSYLVGLFIFA 25
+++ Y P YG+PN ++ +L TN +E+ E ++ I PW S + + +FA
Sbjct: 38 IISWLYLPVGMIYGSPNIGSVASLLDTNKQEALEFISNIPSGIIPWSVSLFILIIVFA 95
>UniRef50_Q1NST9 Cluster: Putative uncharacterized protein; n=2;
delta proteobacterium MLMS-1|Rep: Putative
uncharacterized protein - delta proteobacterium MLMS-1
Length = 167
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -2
Query: 221 HCLAYKKFWSVSVRWWRLVISLLLRPTARLISIHCWHCTPPIWKSRP 81
H +AY KF V RW+ L L P+A L+ W PP+W RP
Sbjct: 80 HTIAYDKFDEVDERWYHLNSVL---PSA-LLPSRWWVAKPPVWAWRP 122
>UniRef50_Q1ZCQ2 Cluster: Predicted PE--lipooligosaccharide
phosphorylethanolamine transferase; n=3; Psychromonas
sp. CNPT3|Rep: Predicted PE--lipooligosaccharide
phosphorylethanolamine transferase - Psychromonas sp.
CNPT3
Length = 483
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 165 YFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAI 7
YF YG N L++L TN+ ES E +T+ P + + + + ++ +
Sbjct: 63 YFTTGMVYGRLNNGILMSLFETNIRESLEFITVIPMLFIFLNILLLIVLILYV 115
>UniRef50_Q5BIA9 Cluster: RE10908p; n=6; cellular organisms|Rep:
RE10908p - Drosophila melanogaster (Fruit fly)
Length = 808
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 189 VSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEIL 73
++ LVA YFP YG P+FNT+L + E E L
Sbjct: 188 LAPLVAGTYFPPKSRYGMPSFNTVLKSIARKWETDKESL 226
>UniRef50_P71367 Cluster: UPF0141 membrane protein HI1064; n=23;
Pasteurellaceae|Rep: UPF0141 membrane protein HI1064 -
Haemophilus influenzae
Length = 485
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 183 SLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFI 31
+L+ A Y P +G P++ + +L +T++ E+ E L P SYL+ I
Sbjct: 90 TLLHAFYTPTGLNFGPPSYQYIASLFATDILETKEFLLQIPVSSYLIAFAI 140
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,539,239
Number of Sequences: 1657284
Number of extensions: 14642667
Number of successful extensions: 33862
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33858
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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