Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0728.Seq
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021315-1|AAX33463.1|  808|Drosophila melanogaster RE10908p pro...    33   0.51 
AY060693-1|AAL28241.1|  629|Drosophila melanogaster GH13403p pro...    33   0.51 
AE013599-1874|AAF58258.1|  808|Drosophila melanogaster CG8613-PA...    33   0.51 
AE014297-947|AAF54383.1| 1980|Drosophila melanogaster CG16779-PA...    29   6.3  

>BT021315-1|AAX33463.1|  808|Drosophila melanogaster RE10908p
           protein.
          Length = 808

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 189 VSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEIL 73
           ++ LVA  YFP    YG P+FNT+L   +   E   E L
Sbjct: 188 LAPLVAGTYFPPKSRYGMPSFNTVLKSIARKWETDKESL 226


>AY060693-1|AAL28241.1|  629|Drosophila melanogaster GH13403p
           protein.
          Length = 629

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 189 VSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEIL 73
           ++ LVA  YFP    YG P+FNT+L   +   E   E L
Sbjct: 9   LAPLVAGTYFPPKSRYGMPSFNTVLKSIARKWETDKESL 47


>AE013599-1874|AAF58258.1|  808|Drosophila melanogaster CG8613-PA
           protein.
          Length = 808

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 189 VSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEIL 73
           ++ LVA  YFP    YG P+FNT+L   +   E   E L
Sbjct: 188 LAPLVAGTYFPPKSRYGMPSFNTVLKSIARKWETDKESL 226


>AE014297-947|AAF54383.1| 1980|Drosophila melanogaster CG16779-PA
           protein.
          Length = 1980

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 49  VAVPRKNRQDFGRLFHIGGVQCQQCIEI-RRAVGLSKREITSRHQR 183
           V  PRKNR         G  QCQ C +I   A  L+K ++T   +R
Sbjct: 283 VEAPRKNRPKLSSPTRHGPQQCQICCKIFGNASALAKHKLTHSDER 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,488,193
Number of Sequences: 53049
Number of extensions: 686824
Number of successful extensions: 1569
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)