Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0727.Seq
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    28   0.075
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   2.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   2.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   2.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   2.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   2.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   8.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 0.075
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 492
           C  G VC I++ G  +C    DCP  T+         NE   + C+
Sbjct: 385 CQNGGVCRISDGGGYIC----DCPSGTNGTNCEIDTINECDSNPCK 426


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 504 AILCLDNSDQCRGPQYHHVQIEYYGTCRE 590
           A LC D  D     +Y+HV I    T RE
Sbjct: 291 AFLCEDPVDLLESGRYNHVPIMIGYTTRE 319


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 504 AILCLDNSDQCRGPQYHHVQIEYYGTCRE 590
           A LC D  D     +Y+HV I    T RE
Sbjct: 291 AFLCEDPVDLLESGRYNHVPIMIGYTTRE 319


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 504 AILCLDNSDQCRGPQYHHVQIEYYGTCRE 590
           A LC D  D     +Y+HV I    T RE
Sbjct: 291 AFLCEDPVDLLESGRYNHVPIMIGYTTRE 319


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 504 AILCLDNSDQCRGPQYHHVQIEYYGTCRE 590
           A LC D  D     +Y+HV I    T RE
Sbjct: 291 AFLCEDPVDLLESGRYNHVPIMIGYTTRE 319


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 504 AILCLDNSDQCRGPQYHHVQIEYYGTCRE 590
           A LC D  D     +Y+HV I    T RE
Sbjct: 290 AFLCEDPVDLLESGRYNHVPIMIGYTTRE 318


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 222 IPCSMCSASEMSPRPSFS 169
           +P   CS +  SP PS S
Sbjct: 191 LPTPTCSEASSSPTPSHS 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,606
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)