Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0727.Seq
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 39 0.003
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 38 0.009
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 37 0.012
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.021
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 34 0.11
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.11
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 34 0.11
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 0.59
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 31 0.78
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 3.2
SB_19572| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 29 4.2
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 28 5.5
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 28 7.3
SB_5047| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.18) 28 7.3
SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84) 28 7.3
SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 9.7
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 27 9.7
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 9.7
SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2) 27 9.7
SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24) 27 9.7
SB_2148| Best HMM Match : WSC (HMM E-Value=0.039) 27 9.7
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 501
PC V C AG+ C + G A C C+ +CP D + VC + T+ + CE++R
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHR 108
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQR 507
PC C G VC GD C C CP D VC+ FN+ +++ CE+++
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHK-- 170
Query: 508 SYASTTLISAVVRN 549
YA +S ++N
Sbjct: 171 -YACKLQMSMAIKN 183
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 495
PCL V C CE DA C C + CP D VC ET+ + C +
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 351
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 495
PCL V C CE DA C C + CP D VC ET+ + C +
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 85
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PCL V C CE DA C C + CP D VC ET+ + C
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLC 126
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 337 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 504
PC CSA CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQ 1818
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 PCLKVHCS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 501
PC + C G VC + C C CP S+R VC + T+ S CE++R
Sbjct: 2977 PCERYKCRYQGEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHR 3031
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 337 PCLKVHCSAGRV--CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRS 510
PC +CS+ C+ + G A C C +DCP + + VC + N + ++C + + R+
Sbjct: 1348 PCEGFNCSSPPYSSCQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNEC-LMQARA 1402
Query: 511 YASTTLISA 537
A+ I+A
Sbjct: 1403 CATNKTITA 1411
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 PCLKVHC-SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 501
PC++ C S GD+ CI CP ++ +C + N T+ S C + R
Sbjct: 1836 PCVRYDCGSTNPYSTCKPKGDSGFECI--CPTCPKAKDYLCASNNLTYMSKCHLER 1889
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
PC V C C G A+C C +CP E VC T+ S C + + A
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARACQA 835
Query: 517 STTL 528
T++
Sbjct: 836 QTSI 839
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PCLK+ C C + G A C C DC + + VC T+ ++C
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH---TYSPVCGGDKTTYINNC 275
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
PC ++ CS C + +G A C C + C + VC + + C + R
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQCQVRF---KPVCGTDGREYLNRCFLRRNACRT 765
Query: 517 STTL 528
T++
Sbjct: 766 QTSI 769
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PC + C+ C+ DA C C + CP D R C + T+++DC
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDC 198
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 35.5 bits (78), Expect = 0.036
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
PC CSA + G+A+C C+ CP D VC + + + + C++ RQ +
Sbjct: 250 PCQTSPCSAPYAKCLVVQGEAVCTCL-SCPNMLDP---VCGSDGKNYDNVCKL-RQNACK 304
Query: 517 STTLISAVVRNTTTF 561
+ TLI+ + R+ F
Sbjct: 305 TNTLITLISRDACPF 319
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
PC+ C+A ++ G A+C C+ CP + VC + + + ++CE+ +Q +
Sbjct: 181 PCMTKACTAPYSKCMSVRGKAVCMCM-SCP---KMNKPVCGSNGKDYNNECEL-QQFACK 235
Query: 517 STTLISAVVRN 549
+ T+I+ R+
Sbjct: 236 TNTMITVARRS 246
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
PC V C C++ + G C C C YE VC +T+ + CE+
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEMRASACLK 1327
Query: 517 STTLISA 537
ST + A
Sbjct: 1328 STMVTVA 1334
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 495
PC C G+ C + +G A C C CP D VC + +T+ + C++
Sbjct: 1573 PCEITLCDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDM 1621
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNC-IKDCPYETDSRRMVCTNFNETWQSDC 489
PC + C+ + + G+ MC C + +CP + VC + T+ ++C
Sbjct: 1865 PCGNIKCTHKQQQCVVRSGEPMCECVVNECPKNSSK---VCGSDGWTYDNEC 1913
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PCL V C CE DA C C CP D VC +T+ + C
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDNLC 238
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 495
PC V C C G +C C+ CP + + VC + T++S+CE+
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPPD-NQNASVCGSDLVTYRSECEL 1458
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 495
PC C G CEI E G +C C C D VC + +T+ + C +
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSL 1847
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PC + C + C ++ A C C K CP S +C + +T+ + C
Sbjct: 1337 PCNRTQCPSYSRCVLDSSLQAKCVCTKSCPL---SYEPLCASNGKTFPNQC 1384
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 340 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYAS 519
C + C +C + G C+C CP S + VC + +++ S+CE+ ++ A
Sbjct: 1659 CGNIRCPRFSMCISAQEGGIKCSCPIYCP---PSGQPVCGSDGKSYGSECELRKEACEAK 1715
Query: 520 TTL 528
L
Sbjct: 1716 IKL 1718
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 340 CLKVHCSAGRVCEINEHGDAMCNCIKDCP 426
C KV C C + +G A C+C CP
Sbjct: 1515 CSKVTCHRYAKCNNHYNGTASCSCSSRCP 1543
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 501
PC + C G C +G A C C +C T VC + +++ S C + R
Sbjct: 1729 PCDDLQCLHGSTCVRRVNGSASCQC-PEC--RTLKYTPVCGDDGKSYLSTCMLKR 1780
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNC--IKDCPYETDSRRMVCTNFNETWQSDC 489
PC +V C R C ++ C C +CP D+ VC ++ ++C
Sbjct: 192 PCSRVKCKEDRHCVVDMDMKPKCICPSESECPLTVDT---VCGTDKSSYLNEC 241
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVY 498
PC K C G +C + G C C CP ++ VC+ + + + CE++
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCELH 63
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PC++V C VC+ DA C C +C + R C N T+ ++C
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNEC 323
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
PC KV C+ C G C C + CP S ++VC + + + ++C
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVCGSDDRDYANEC 1585
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = +1
Query: 340 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYAS 519
CL C G VC+ G C C C T VC + T+ + C + R +
Sbjct: 701 CLVQPCKYGGVCQAGADGKTKCVCSAAC---TREYAPVCGSDGNTYNNLCLLTAARCQSQ 757
Query: 520 TTLISA 537
T + A
Sbjct: 758 TFIYRA 763
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 349 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
+ C+ C+ DA C C + CP D R C + T+++DC
Sbjct: 1 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDC 44
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 376 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 504
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
>SB_19572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 260 SAHGIASRPSSQTFRARCVQPPRCPRGRASPT 165
S+ G+ SR S T RAR PP P+ ASP+
Sbjct: 516 SSSGVPSRVGSATSRARQQPPPPPPQRPASPS 547
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +2
Query: 347 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTA--SDLMP 517
KS ST T +P T T P TP T+TK ++ A + D++P
Sbjct: 298 KSDQVTTTPKPSTTTTSPTKTTPTTTPPTTTPSTTTTSTTTKQTSKDASLESELKDILP 356
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 302 KRMKTKKSTWKTLA*KSTAAQDVSAKST-----NTETPCVTASRTVPTRQTPDAWCAQTS 466
K +K KK K LA +S + A + + P TA +T PT TP A T+
Sbjct: 155 KPVKVKKEVNKALAMESAGFMNALATAAVAAPRKRKRPATTAQKT-PTATTPTTPTASTA 213
Query: 467 TKP 475
KP
Sbjct: 214 VKP 216
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 352 HCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC-EVYRQRS--YAST 522
HC+ ++ E+ +C + +C +C N + ++ DC + Y+ ++ Y
Sbjct: 516 HCACRNGYQLKENSKYVCEDLNECNVANAGCEHICENTHGSFNCDCRQGYKLKAGGYGCE 575
Query: 523 TLISAVVRN 549
+ +V+N
Sbjct: 576 NINECLVKN 584
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +2
Query: 314 TKKSTWKTLA*KSTAAQDVSAKSTNTETPCV--TASRTVPTRQTPDAWCAQTSTKPGNRI 487
T +T A +TAA +A T T T V TA+ TV T A T+T
Sbjct: 136 TATATTTATAATATAAATATATGTTTATATVTATATATVTAAATATATATATATATTTST 195
Query: 488 AKYTAS 505
A TA+
Sbjct: 196 ATVTAT 201
>SB_5047| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.18)
Length = 297
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 182 RGDISEAEHIEHGMSESLDEKRYHGQK*PELTTFSTRSLMKRMKTKKSTW 331
+ +++A + + SL+ +R HG++ P + T T K K K S W
Sbjct: 120 KSQLAQARVQQEALVSSLNAERSHGRQTPHVETNGTEVPGKLTKEKFSPW 169
>SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84)
Length = 746
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 376 EINEHGDAMCNCIKDCPY----ETDSRRMVCTNFNETWQSDCEVYRQR 507
++ EH +C+ C + E+D + N+ Q+DC V++QR
Sbjct: 67 QLMEHSVKYASCVPFCTWMAELESDLMNVFRFNWGSMQQNDCAVFKQR 114
>SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1219
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 273 NSGYFCPWYRFSSKLSDIPCSMCSASEMSPRPSF 172
N G+F WY++ + + C CSA+ SF
Sbjct: 90 NDGHFLDWYKWKESIHSLAC-RCSAAAKKKGYSF 122
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 371 SAKSTNTETPCVTASRTV-PTRQTPDAWCAQTSTKPGNRIAKYT 499
+ KS N T + P + PDA + KPG I K T
Sbjct: 188 AVKSNNGSTKLANKQENIGPNKTKPDAKTPANANKPGKEITKQT 231
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 495
PC CS R + +G A C C K C T VC + N+T+ + C +
Sbjct: 172 PCEISLCSFPRPICVEVNGTATCECPKVC---TLDYTPVCGSDNKTYANLCNL 221
>SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2)
Length = 120
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 371 SAKSTNTETPCVTASRTV-PTRQTPDAWCAQTSTKPGNRIAKYTASDLMPRQL*SVPWSA 547
+AKS T TP ++ T PTR + A+ TKP + +S P++ + S
Sbjct: 38 TAKSHTTTTPSTSSGTTSKPTRVPSNPTMAKVITKPRTTSSTPGSSSTTPQKPATTEHST 97
Query: 548 IP 553
IP
Sbjct: 98 IP 99
>SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24)
Length = 652
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +2
Query: 347 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDLMPRQL 526
K+ Q ++ + T T T + T+PTR+ A + ++TKP + + + S + +
Sbjct: 512 KTCTGQPITGQPTQPATTSTTPT-TMPTRKPSTAQPSVSTTKPNDVVKTHMTSVVTKPKP 570
Query: 527 *SVPWSAIPPR 559
S+P + P+
Sbjct: 571 TSIPPTTGSPK 581
>SB_2148| Best HMM Match : WSC (HMM E-Value=0.039)
Length = 159
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 273 NSGYFCPWYRFSSKLSDIPCSMCSASEMSPRPSF 172
N G+F WY++ + + C CSA+ SF
Sbjct: 53 NDGHFLDWYKWKESIHSLAC-RCSAAAKKKGYSF 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,592,672
Number of Sequences: 59808
Number of extensions: 385848
Number of successful extensions: 1349
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -