BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0727.Seq (637 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 54 1e-07 AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 54 1e-07 U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 41 6e-04 AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 41 6e-04 U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 33 0.13 Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 33 0.23 Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 33 0.23 AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.52 U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 30 1.6 AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 29 3.7 AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical... 28 4.9 Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 8.5 U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical pr... 27 8.5 >L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin protein. Length = 264 Score = 53.6 bits (123), Expect = 1e-07 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQR 507 PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+R Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRER 109 Score = 40.7 bits (91), Expect = 9e-04 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 510 LCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRR 635 LC S +C V +EY G C+++ +CTE M+ FP R Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPER 152 >AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (sparc) related protein1 protein. Length = 264 Score = 53.6 bits (123), Expect = 1e-07 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQR 507 PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+R Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRER 109 Score = 40.7 bits (91), Expect = 9e-04 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 510 LCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRR 635 LC S +C V +EY G C+++ +CTE M+ FP R Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPER 152 >U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical protein F41G3.12 protein. Length = 1483 Score = 41.1 bits (92), Expect = 6e-04 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +1 Query: 346 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRSYAST 522 K C C + E+ A C C DCP YE + + VC T+ S+C + + + S Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574 Query: 523 TLISA 537 +++A Sbjct: 575 FVMTA 579 Score = 36.7 bits (81), Expect = 0.014 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516 PC K+ C C + A C C C D R VC ET+ ++CE+ +++S Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEM-KKKSCE 424 Query: 517 STTLISAVVRNT 552 + ++I + T Sbjct: 425 TKSMIKVKHQGT 436 Score = 27.9 bits (59), Expect = 6.4 Identities = 13/51 (25%), Positives = 22/51 (43%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489 PC C G+ C++ C C + C T + VC +T+ ++C Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 342 >AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic protein) homologfamily member protein. Length = 1473 Score = 41.1 bits (92), Expect = 6e-04 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +1 Query: 346 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRSYAST 522 K C C + E+ A C C DCP YE + + VC T+ S+C + + + S Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582 Query: 523 TLISA 537 +++A Sbjct: 583 FVMTA 587 Score = 36.7 bits (81), Expect = 0.014 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516 PC K+ C C + A C C C D R VC ET+ ++CE+ +++S Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEM-KKKSCE 432 Query: 517 STTLISAVVRNT 552 + ++I + T Sbjct: 433 TKSMIKVKHQGT 444 Score = 27.9 bits (59), Expect = 6.4 Identities = 13/51 (25%), Positives = 22/51 (43%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489 PC C G+ C++ C C + C T + VC +T+ ++C Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 350 >U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical protein B0507.1 protein. Length = 615 Score = 33.5 bits (73), Expect = 0.13 Identities = 19/70 (27%), Positives = 24/70 (34%) Frame = +1 Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYASTTLIS 534 CS G C G+ MC C D Y S C + C+ + S A + S Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCKTDMECSAAFSECSS 274 Query: 535 AVVRNTTTFK 564 R FK Sbjct: 275 GGCRCKRGFK 284 >Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 32.7 bits (71), Expect = 0.23 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 445 T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+ Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368 Query: 446 AWCAQTSTKPGNRIAKY 496 + S+ P N I Y Sbjct: 369 I-TSTLSSLPDNAICSY 384 >Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 32.7 bits (71), Expect = 0.23 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 445 T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+ Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368 Query: 446 AWCAQTSTKPGNRIAKY 496 + S+ P N I Y Sbjct: 369 I-TSTLSSLPDNAICSY 384 >AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical protein Y46C8AL.2 protein. Length = 456 Score = 31.5 bits (68), Expect = 0.52 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 454 TT +T + MK T +T T+ KST + KST T T ++ PT T Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318 Query: 455 AQTSTKP 475 T T P Sbjct: 319 KSTPTTP 325 Score = 29.1 bits (62), Expect = 2.8 Identities = 24/91 (26%), Positives = 38/91 (41%) Frame = +2 Query: 203 EHIEHGMSESLDEKRYHGQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKS 382 E+I E+LD+ + + ++T+ MK+ +T T+ KST + KS Sbjct: 123 ENISDAKWETLDDNGKNYFVCSYDSRWATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKS 180 Query: 383 TNTETPCVTASRTVPTRQTPDAWCAQTSTKP 475 T T T ++ PT T T T P Sbjct: 181 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 211 Score = 28.7 bits (61), Expect = 3.7 Identities = 20/67 (29%), Positives = 28/67 (41%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 454 TT +T + MK T +T K+ +T + KST T T ++ PT T Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331 Query: 455 AQTSTKP 475 T T P Sbjct: 332 KSTPTTP 338 Score = 28.3 bits (60), Expect = 4.9 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 1/105 (0%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 222 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 281 Query: 452 CAQTSTKPGNRIAKYTASDLMPRQL*SVPWSAIPPRSNRVLRNVP 586 T T P + + P + S P + P + + P Sbjct: 282 MKSTPTTP-TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 325 Score = 27.9 bits (59), Expect = 6.4 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 439 TT +T + MK T +T T+ KST + KST T T ++ PT T Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 183 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 242 Query: 452 CAQTSTKP 475 T T P Sbjct: 243 MKSTPTTP 250 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255 Query: 452 CAQTSTKP 475 T T P Sbjct: 256 MKSTPTTP 263 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 209 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 268 Query: 452 CAQTSTKP 475 T T P Sbjct: 269 MKSTPTTP 276 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 297 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 356 Query: 452 CAQTSTKP 475 T T P Sbjct: 357 MKSTPTTP 364 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369 Query: 452 CAQTSTKP 475 T T P Sbjct: 370 MKSTPTTP 377 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 323 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 382 Query: 452 CAQTSTKP 475 T T P Sbjct: 383 MKSTPTTP 390 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 336 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 395 Query: 452 CAQTSTKP 475 T T P Sbjct: 396 MKSTPTTP 403 >U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical protein C31H1.5 protein. Length = 315 Score = 29.9 bits (64), Expect = 1.6 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 2/96 (2%) Frame = +1 Query: 340 CLKVHCSA-GRVCEINEHGD-AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSY 513 C VH S + + E D CNC+++ T R +C +F + C + R+ + Sbjct: 72 CCAVHDSCYDNIAQTQEGCDNKFCNCLRNAMTSTKDRYFMCADF--VTDAACSLVRKFGH 129 Query: 514 ASTTLISAVVRNTTTFKSSITERAEKCLTALKARCL 621 + R T F + + A + L CL Sbjct: 130 EHYGTRTPDNRELTAFHPATNQTANREYNRLYKSCL 165 >AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone receptor familyprotein 270 protein. Length = 399 Score = 28.7 bits (61), Expect = 3.7 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -1 Query: 187 PAAELLRRWTFSSRGAD--PAVPTPHTLASAVQMTAI 83 P +++ RRW +SRG P+ + H+L ++ M A+ Sbjct: 15 PLSKISRRWNLNSRGGAIVPSSTSVHSLGHSISMLAV 51 >AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical protein C15F1.1 protein. Length = 360 Score = 28.3 bits (60), Expect = 4.9 Identities = 15/46 (32%), Positives = 19/46 (41%) Frame = -1 Query: 196 RDVPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANARRP 59 RD+P +L+R WT R A TL +Q R N P Sbjct: 315 RDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIEP 360 >Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 27.9 bits (59), Expect = 6.4 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +1 Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 489 C G E + HG + C K CP T+ +C + ++T QS+C Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431 >Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 27.9 bits (59), Expect = 6.4 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +1 Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 489 C G E + HG + C K CP T+ +C + ++T QS+C Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431 >Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical protein F44D12.2 protein. Length = 342 Score = 27.5 bits (58), Expect = 8.5 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Frame = +1 Query: 337 PCLKVHCSAGRV----CEINEHGDAMCNCIKDCPY 429 P ++ C G V C +N HG+ MC C D Y Sbjct: 59 PTIQKGCVIGEVAPEGCRVNHHGNVMCFC-SDADY 92 >U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical protein F58G4.4 protein. Length = 267 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = +1 Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTN--FNETWQSDCEVYRQRS 510 P + +C++G C +E C C ++ + VC + E + D V+ + Sbjct: 138 PKCQYYCTSGEKCSRDECPKRKCQNNSQCQFDGSESKCVCQSGYIGEFCEIDQTVFNHPA 197 Query: 511 YASTTLISAVV 543 ++ L+ ++V Sbjct: 198 DSAVVLMCSIV 208 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,979,371 Number of Sequences: 27780 Number of extensions: 273775 Number of successful extensions: 1028 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1021 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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