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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0727.Seq
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    54   1e-07
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    54   1e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    41   6e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    41   6e-04
U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical p...    33   0.13 
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    33   0.23 
AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical ...    31   0.52 
U42848-2|AAA83608.2|  315|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF022983-3|AAB69942.2|  399|Caenorhabditis elegans Nuclear hormo...    29   3.7  
AC006608-11|AAF39761.1|  360|Caenorhabditis elegans Hypothetical...    28   4.9  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68298-1|CAA92598.2|  342|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U50309-4|AAG24133.1|  267|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQR 507
           PC    C  G+ C + + G+  C CI  CP  + D    VC N N+T+ S C++YR+R
Sbjct: 52  PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRER 109



 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 510 LCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRR 635
           LC   S +C       V +EY G C+++ +CTE  M+ FP R
Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPER 152


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQR 507
           PC    C  G+ C + + G+  C CI  CP  + D    VC N N+T+ S C++YR+R
Sbjct: 52  PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRER 109



 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 510 LCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRR 635
           LC   S +C       V +EY G C+++ +CTE  M+ FP R
Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPER 152


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 346 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRSYAST 522
           K  C     C + E+  A C C  DCP YE +  + VC     T+ S+C + +   + S 
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574

Query: 523 TLISA 537
            +++A
Sbjct: 575 FVMTA 579



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
           PC K+ C     C +     A C C   C    D  R VC    ET+ ++CE+ +++S  
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEM-KKKSCE 424

Query: 517 STTLISAVVRNT 552
           + ++I    + T
Sbjct: 425 TKSMIKVKHQGT 436



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
           PC    C  G+ C++       C C + C   T +   VC    +T+ ++C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 342


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 346 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRSYAST 522
           K  C     C + E+  A C C  DCP YE +  + VC     T+ S+C + +   + S 
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582

Query: 523 TLISA 537
            +++A
Sbjct: 583 FVMTA 587



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYA 516
           PC K+ C     C +     A C C   C    D  R VC    ET+ ++CE+ +++S  
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEM-KKKSCE 432

Query: 517 STTLISAVVRNT 552
           + ++I    + T
Sbjct: 433 TKSMIKVKHQGT 444



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 489
           PC    C  G+ C++       C C + C   T +   VC    +T+ ++C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 350


>U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical
           protein B0507.1 protein.
          Length = 615

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/70 (27%), Positives = 24/70 (34%)
 Frame = +1

Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSYASTTLIS 534
           CS G  C     G+ MC C  D  Y   S    C       +  C+   + S A +   S
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCKTDMECSAAFSECSS 274

Query: 535 AVVRNTTTFK 564
              R    FK
Sbjct: 275 GGCRCKRGFK 284


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 445
           T+ ST S    +++  +T+ + A  ST++   + +S++T T      T S ++PT  TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368

Query: 446 AWCAQTSTKPGNRIAKY 496
              +  S+ P N I  Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 445
           T+ ST S    +++  +T+ + A  ST++   + +S++T T      T S ++PT  TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368

Query: 446 AWCAQTSTKPGNRIAKY 496
              +  S+ P N I  Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384


>AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical
           protein Y46C8AL.2 protein.
          Length = 456

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 22/67 (32%), Positives = 29/67 (43%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 454
           TT +T + MK   T  +T  T+  KST     + KST T     T  ++ PT  T     
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318

Query: 455 AQTSTKP 475
             T T P
Sbjct: 319 KSTPTTP 325



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 24/91 (26%), Positives = 38/91 (41%)
 Frame = +2

Query: 203 EHIEHGMSESLDEKRYHGQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKS 382
           E+I     E+LD+   +       + ++T+     MK+  +T  T+  KST     + KS
Sbjct: 123 ENISDAKWETLDDNGKNYFVCSYDSRWATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKS 180

Query: 383 TNTETPCVTASRTVPTRQTPDAWCAQTSTKP 475
           T T     T  ++ PT  T       T T P
Sbjct: 181 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 211



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 454
           TT +T + MK   T  +T K+    +T     + KST T     T  ++ PT  T     
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331

Query: 455 AQTSTKP 475
             T T P
Sbjct: 332 KSTPTTP 338



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 222 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 281

Query: 452 CAQTSTKPGNRIAKYTASDLMPRQL*SVPWSAIPPRSNRVLRNVP 586
              T T P   +     +   P  + S P +   P + +     P
Sbjct: 282 MKSTPTTP-TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 325



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 439
           TT +T + MK   T  +T  T+  KST     + KST T     T  ++ PT  T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 183 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 242

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 243 MKSTPTTP 250



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 256 MKSTPTTP 263



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 209 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 268

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 269 MKSTPTTP 276



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 297 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 356

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 357 MKSTPTTP 364



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 370 MKSTPTTP 377



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 323 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 382

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 383 MKSTPTTP 390



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 451
           TT +T + MK   T  +T  T+ +  +T     + KST T     T  ++ PT  T    
Sbjct: 336 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 395

Query: 452 CAQTSTKP 475
              T T P
Sbjct: 396 MKSTPTTP 403


>U42848-2|AAA83608.2|  315|Caenorhabditis elegans Hypothetical
           protein C31H1.5 protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
 Frame = +1

Query: 340 CLKVHCSA-GRVCEINEHGD-AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRSY 513
           C  VH S    + +  E  D   CNC+++    T  R  +C +F     + C + R+  +
Sbjct: 72  CCAVHDSCYDNIAQTQEGCDNKFCNCLRNAMTSTKDRYFMCADF--VTDAACSLVRKFGH 129

Query: 514 ASTTLISAVVRNTTTFKSSITERAEKCLTALKARCL 621
                 +   R  T F  +  + A +    L   CL
Sbjct: 130 EHYGTRTPDNRELTAFHPATNQTANREYNRLYKSCL 165


>AF022983-3|AAB69942.2|  399|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 270 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -1

Query: 187 PAAELLRRWTFSSRGAD--PAVPTPHTLASAVQMTAI 83
           P +++ RRW  +SRG    P+  + H+L  ++ M A+
Sbjct: 15  PLSKISRRWNLNSRGGAIVPSSTSVHSLGHSISMLAV 51


>AC006608-11|AAF39761.1|  360|Caenorhabditis elegans Hypothetical
           protein C15F1.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -1

Query: 196 RDVPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANARRP 59
           RD+P  +L+R WT   R    A     TL   +Q     R N   P
Sbjct: 315 RDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIEP 360


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +1

Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 489
           C  G   E + HG + C   K CP  T+    +C + ++T   QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +1

Query: 355 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 489
           C  G   E + HG + C   K CP  T+    +C + ++T   QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431


>Z68298-1|CAA92598.2|  342|Caenorhabditis elegans Hypothetical
           protein F44D12.2 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = +1

Query: 337 PCLKVHCSAGRV----CEINEHGDAMCNCIKDCPY 429
           P ++  C  G V    C +N HG+ MC C  D  Y
Sbjct: 59  PTIQKGCVIGEVAPEGCRVNHHGNVMCFC-SDADY 92


>U50309-4|AAG24133.1|  267|Caenorhabditis elegans Hypothetical
           protein F58G4.4 protein.
          Length = 267

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 337 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTN--FNETWQSDCEVYRQRS 510
           P  + +C++G  C  +E     C     C ++    + VC +    E  + D  V+   +
Sbjct: 138 PKCQYYCTSGEKCSRDECPKRKCQNNSQCQFDGSESKCVCQSGYIGEFCEIDQTVFNHPA 197

Query: 511 YASTTLISAVV 543
            ++  L+ ++V
Sbjct: 198 DSAVVLMCSIV 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,979,371
Number of Sequences: 27780
Number of extensions: 273775
Number of successful extensions: 1028
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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