Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0726.Seq
         (682 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    60   4e-08
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.003
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.056
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.23 
UniRef50_Q0PVD7 Cluster: Lst1p; n=1; Pichia pastoris|Rep: Lst1p ...    35   1.6  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   4.9  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = +3

Query: 510 TRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 632
           TRLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 63  TRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 72  GKCFR*CSSCDDPRISPLTSQYECPQ 149
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.056
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +2

Query: 575 PRKSPVSLFFVTTSPCREW 631
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.23
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -2

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_Q0PVD7 Cluster: Lst1p; n=1; Pichia pastoris|Rep: Lst1p -
           Pichia pastoris (Yeast)
          Length = 919

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +2

Query: 80  LSLMFVLRRSKNFTSNVAIRMPPVIPINHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSRF 259
           +SL+  ++  K + S + IR    + +  YLG  KT+  +  +  +IP    ++S+   F
Sbjct: 527 ISLLDSIQAVKGYQSQLKIRCSAGLQVTKYLGSFKTSNSD--ADPLIPIVTSNTSVGCLF 584

Query: 260 EHSNLLKVKLSAH 298
           +H   L  K  AH
Sbjct: 585 KHDGKLSTKNDAH 597


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -2

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,135,050
Number of Sequences: 1657284
Number of extensions: 11723893
Number of successful extensions: 26075
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26072
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)