Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0725.Seq
(790 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 42 1e-04
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 35 0.015
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 33 0.047
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 33 0.062
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 32 0.081
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.11
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 32 0.11
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 30 0.33
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 30 0.43
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 29 1.0
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 1.0
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 1.0
SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|c... 29 1.0
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 29 1.0
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 28 1.3
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.3
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 28 1.3
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.3
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 1.8
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 28 1.8
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 28 1.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.8
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 2.3
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 27 2.3
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 27 2.3
SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces ... 27 3.1
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 3.1
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 27 3.1
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 27 4.0
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 4.0
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 26 5.4
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 26 5.4
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 26 5.4
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 5.4
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 26 7.1
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 7.1
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 26 7.1
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 26 7.1
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 26 7.1
SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe... 26 7.1
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 7.1
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 26 7.1
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 26 7.1
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 25 9.4
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 25 9.4
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 9.4
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 41.5 bits (93), Expect = 1e-04
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Frame = +1
Query: 31 ELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHE 210
+L + K RN + L+ +++EA+ N+ L E+K L D+I E G +
Sbjct: 876 QLKSDLKSIRNNNERKRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIGGIRYR 935
Query: 211 IEKAR-----KRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDAS 363
I+K++ ++L+ KD+L S K K+ N++R++S + + L S+ +T S
Sbjct: 936 IQKSKVDDLHEQLKFVKDKLNKMSFKKKK--NEQRSQSFQVELSNLTSEYDTTTES 989
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 34.7 bits (76), Expect = 0.015
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +1
Query: 34 LDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADE-VKDLLDQIGEGGRNIHE 210
L+A ++E E RLK E+ Q++LE +RE K E K L Q E R
Sbjct: 629 LEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMA 688
Query: 211 IEKARKRLEAEKDELRPPSKKPK-RLSNKKRTRSSVLSSNCLRSDRRSTDA 360
E+ R R E EK L ++ K ++R R +L +RR +A
Sbjct: 689 REQ-RLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREA 738
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 33.1 bits (72), Expect = 0.047
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 LKVDDLAAELDASQKE--CRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQ 180
LK ++ A+EL S+ E C +Y +L+ +EE ++ ++++EN+NL ++ + ++
Sbjct: 683 LKQNESASELLKSRNEKLCVDYD----KLRSVFEEDSSKILSLQKENENLQSQILQISEE 738
Query: 181 IGEGGRNIHEIEKARKRLEAEKDEL 255
+ + +E LE + E+
Sbjct: 739 LVDYRSRCEALEYGNYELETKLIEM 763
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 32.7 bits (71), Expect = 0.062
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 10 KVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGE 189
KV +L E + + +CR Y ++L L Y E + +L E E+ + DQ+ +
Sbjct: 1026 KVQELREENASLKDQCRTYESQLASLVSKYSETESELNKKEAELVIFQKEITEYRDQLHK 1085
Query: 190 GGRN 201
+N
Sbjct: 1086 AFQN 1089
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 32.3 bits (70), Expect = 0.081
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = +1
Query: 7 LKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIG 186
L+ D+ A++ D S + N ++E+ +K E Q E+V N +DE D D+
Sbjct: 112 LEADEDASDSDDSV-DSSNKNSEV-SIKRRKTESNSQ-ESVDSSNSESSDEESDSEDETQ 168
Query: 187 EGGRNIHEIEKARKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASK 366
+ R + I++ RKR + ++E K + L +KR R + L + K
Sbjct: 169 QLLRELENIKQERKREQMLQEE------KNRALEQEKREREIAFGNELLNKASSGSFQVK 222
Query: 367 RR 372
RR
Sbjct: 223 RR 224
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.11
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 109 QEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELRPPSKKPKRLS 288
QEQL E + L D++ ++ E G+N +I + LE E+D L + + +
Sbjct: 396 QEQLHKANEEIEFLHDQIS----RMNEEGKNFEDIMLQFRSLEEERDVLESKLQTLEDDN 451
Query: 289 NKKRTRSSVLSS--NCLRSDRRSTDASK 366
N R +S L + LR+ R D K
Sbjct: 452 NSLRLMTSSLGNQIESLRTQNREIDEEK 479
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 10 KVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKN 147
++D+L+ ELD +Q E+ LK EE + A E +
Sbjct: 293 RLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENSSSAFENEENS 338
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +1
Query: 22 LAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRN 201
L + +D +++ T+ L+ E ++ E ++ ENK L E K L +I +
Sbjct: 162 LISRIDRTKRHFSELFTQKQMLQLQNENFKDDYEKIKEENKRLYKERKSFLSKIEKSACE 221
Query: 202 IHEIEKA 222
IH+++++
Sbjct: 222 IHDLKES 228
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/101 (20%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +1
Query: 4 KLKVDDLAAELDASQK--ECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLD 177
+LK+++ L + + EC +L + AY+ + ++++++ NL +V +
Sbjct: 32 ELKLNEKGGVLKENDEHLECSESFKKLAEKEEAYQTLKNSYNSLKQQHSNLLGKVSGIKS 91
Query: 178 QIGEG-GRNIHEIEKARKRLEAEKDELRPPSKKPKRLSNKK 297
+GE ++ E+ + RKR++ E ++ +++ +LSN++
Sbjct: 92 TLGERLKKDSQELAQNRKRIQ-ELEKSLGDAEEALKLSNEE 131
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 29.9 bits (64), Expect = 0.43
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 88 KGAYEEGQEQLEAVRRENKN-LADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELRPP 264
KG G+ + N++ LAD + ++ E R + EI++ K L+ EK+E R
Sbjct: 6 KGVCVSGKPWKTEKKAYNRSGLADAQRTPYEKRMEQKRKLDEIKEREKELKREKEEQRAA 65
Query: 265 SKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRKNSK 387
+ R + + + + ++ D +RR K +K
Sbjct: 66 HAEKIRTRRQAKADRERMELLQAKLHQKVIDRRRRREKRNK 106
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 28.7 bits (61), Expect = 1.0
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = +1
Query: 22 LAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRN 201
L ELD+S++ C++ T+ + + E + + + + +E + I
Sbjct: 201 LLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEEL 260
Query: 202 IHEIEKARKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDR 345
IH +EK RK E D + K + LS +K R + + SN + ++
Sbjct: 261 IHAVEKERK---TETDYM-----KKESLSEQKE-RGAFMESNMILEEK 299
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.7 bits (61), Expect = 1.0
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Frame = +1
Query: 4 KLK-VDDLAAELDASQKECRNYSTELFR-LKGAYEEGQEQLEAVRRENKNLADEVKDLLD 177
K+K +D+ EL+ + + RN T + L ++ ++EA+R+E +N + + D
Sbjct: 637 KMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLSTD 696
Query: 178 QIGEGGRNIHEIEKARKRLEAEKDELRP-PSKKPKRLSNKKRTRSSVLS-SNCLRSDRRS 351
++ ++ +K K L + L+ S++ +R S V S + L+ + +
Sbjct: 697 RLTNANNDVEAFKKEAKELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKGELNA 756
Query: 352 TDASKRRRKNSK 387
+ K RK ++
Sbjct: 757 SKGEKDLRKRTQ 768
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 28.7 bits (61), Expect = 1.0
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +1
Query: 13 VDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGE- 189
VD EL ++ L R +Y +E+L ENK+L+++V L Q+ E
Sbjct: 1187 VDTNFQELSKKHRDLTFNHESLLRQSASY---KEKLSLASSENKDLSNKVSSLTKQVNEL 1243
Query: 190 --GGRNIHEIEKARKRLEAEKDELRPPSKKPKR 282
+ E+E+ L E +L + KR
Sbjct: 1244 SPKASKVPELERKITNLMHEYSQLGKTFEDEKR 1276
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 16 DDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGG 195
++L + D E N ++ LKGA Q ++++ N A E+K L DQI
Sbjct: 1415 ENLKRDYDRLNLEKHNLEKQVNELKGAEVSPQPTGQSLQHVNLAHAIELKALKDQINSEK 1474
Query: 196 RNIHEIEKARKRLEAE 243
+ ++ ++ E E
Sbjct: 1475 AKMFSVQVQYEKREQE 1490
Score = 26.2 bits (55), Expect = 5.4
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 4 KLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQE-QLEAVRRENKNLAD--EVKDLL 174
++K+ D EL+++ C+ E+ RLK G+E + AV+ L + + K +
Sbjct: 1343 EMKLVDTRKELNSALDSCKKREAEIHRLKEHRPSGKENNIPAVKTTEPVLKNIPQRKTIF 1402
Query: 175 D-QIGEGGRNIHE-IEKARKRLEAEKDEL 255
D Q + ++E +++ RL EK L
Sbjct: 1403 DLQQRNANQALYENLKRDYDRLNLEKHNL 1431
>SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 489
Score = 28.7 bits (61), Expect = 1.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = -2
Query: 75 FGGVVAAFLLAGIEFGSKVVDLEF 4
+GG + +LL GI++GS +V +++
Sbjct: 350 YGGALVLYLLMGIQYGSSIVSVQW 373
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/45 (22%), Positives = 28/45 (62%)
Frame = +1
Query: 109 QEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAE 243
Q+QL+ + +EN L E + ++++ + G+++ +I + + + A+
Sbjct: 214 QQQLQELEQENDVLLQEFEHTMERLRDTGKSLADITRLQSEISAQ 258
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +1
Query: 220 ARKRLEAEKDELRPPSKKPK--RLSNKKRTRSS 312
A+++ + EK+E+ KK K RLSNKK T+ S
Sbjct: 717 AKRKKQMEKEEVPRAYKKTKNDRLSNKKSTKKS 749
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 342 QEIDRRIQE-KEEEFENTRKNHQRALDSMQ 428
Q +DR +Q+ KE +NT++ HQ+ LD ++
Sbjct: 912 QTLDRLLQKVKEHSEDNTKEKHQQLLDLLE 941
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 238 AEKD-ELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRKNSKT 390
+E+D E+ PS+ KR+S +RT S + S L ++ + +NS T
Sbjct: 33 SEEDIEIETPSRNRKRVSTTRRTPSKPIRSQPLTPSSSKGAGNEPKSQNSST 84
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 1.3
Identities = 25/112 (22%), Positives = 45/112 (40%)
Frame = +1
Query: 31 ELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHE 210
ELD E ELF+ YE+ + + ++ + + DL Q+ + +
Sbjct: 241 ELDQEITETARLQDELFKSTEEYEQQMITIRHLESQSDIINTTINDLKSQMTITDESSED 300
Query: 211 IEKARKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASK 366
+EK AEK ++ + K L K+ S+L S ++ + D K
Sbjct: 301 LEKLHSNF-AEK--VKEEQELYKSLEKKRSDLESLLKSRRELLEKLTGDLGK 349
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 318 QLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDS 422
+LEL+ +R+ ++ I EK+EE N K RAL++
Sbjct: 275 ELELTSIRERLESLILEKQEEI-NFWKQRCRALET 308
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.9 bits (59), Expect = 1.8
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +1
Query: 31 ELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRN--- 201
E+D +++ + +L +L+ E ++ E V E+++L D+L + +
Sbjct: 625 EMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVN-EHESLLSRTNDILSTLRKERDEKLI 683
Query: 202 -IHEIEKARKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSN 327
IHE ++ ++R+E + LR K P++ + + + N
Sbjct: 684 PIHEWQQLQERIEHQTLLLRQREKVPEQFAAEIEKNEDIRKEN 726
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +1
Query: 223 RKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRKNSKTHART 402
+K E E + P KK S +KR RSS + SD+ + +S TH R
Sbjct: 84 KKENETELANISGPHKKSTSTSTRKRARSSKKKATDSVSDKIDESVAS---YDSSTHLRR 140
Query: 403 TSVPSTP 423
+S P
Sbjct: 141 SSRSKKP 147
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/82 (20%), Positives = 37/82 (45%)
Frame = +1
Query: 13 VDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEG 192
+ + ++LD + + ++ LK E + + A+ N+ L D++K
Sbjct: 971 ITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASNERLMDDLK-------NN 1023
Query: 193 GRNIHEIEKARKRLEAEKDELR 258
G NI ++ ++ AE D+L+
Sbjct: 1024 GENIASLQTEIEKKRAENDDLQ 1045
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 142 KNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELRPPSKKPKRLSNKKRTR 306
K L D K+ L + E NIH +E+ ++ + E EL + + +NK + +
Sbjct: 1344 KALKDSEKNFLRKEAEMTENIHSLEEGKEETKKEIAELSSRLEDNQLATNKLKNQ 1398
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 352 TDASKRRRKNSKTHARTTSVPSTP 423
TD S +RRK + R TSVP +P
Sbjct: 395 TDGSMKRRKRRQPSNRKTSVPRSP 418
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 289 NKKRTRSSVLSSNCLRSDRRSTDASKRRRK-NSKTHARTTSVPS 417
++KR S+ S++ +SDR S +S R+ S++ +R++SV S
Sbjct: 79 SRKRVSFSLTSNDGAKSDRSSQKSSNSRKSIRSQSRSRSSSVGS 122
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/80 (20%), Positives = 35/80 (43%)
Frame = +1
Query: 16 DDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGG 195
+ L +++ Q+E + + LK + ++ ++ + N+ L +K L + +
Sbjct: 370 NSLKQQIEQLQRELASETVVKENLKSSLDQQSANVQKLESTNRALESTIKTLEEDVYTMK 429
Query: 196 RNIHEIEKARKRLEAEKDEL 255
I E+E K E+D L
Sbjct: 430 NKIIELEGILKSANVERDGL 449
>SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 82 RLKGAYEEGQEQLEAVRRENKNLAD 156
+++ AYE+G+ QL + E + LAD
Sbjct: 198 KVQNAYEDGKNQLLGIHNEARRLAD 222
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 14 STTLLPNSMPARRNAATTPPNCSASRVPTKKARNSSRLSAARTRTLPTKSRTSWTRSAKV 193
S +P+++ + N ATTP N T KA +SS + T TLP+ + ++ +
Sbjct: 244 SARSIPSNISST-NVATTPSNTIFEMDDTLKADSSSNEYHSPTNTLPSYHTEADLDNSSI 302
Query: 194 AATS 205
A+++
Sbjct: 303 ASSN 306
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 202 IHEIEKARKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRKN 381
I ++ R+R KDE P+ + +R +S +S S R S D S +
Sbjct: 38 IRKLWNERRRYRMPKDESISPTPISYSFRSLRRGHTSGHASEHTSSSRSSHDESDSMSSS 97
Query: 382 SKTHARTTSVPSTP 423
S++ + + S S P
Sbjct: 98 SESDSDSVSSESNP 111
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 26.6 bits (56), Expect = 4.0
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 148 LADEVKDL----LDQIGEGGRNIHEIEK-ARKRLEAEKDELRPPSKKPKRLSNKKRTRSS 312
+ADE DL D+I EG N+ E+E+ A+ +++A+ ++ PS+K K+ N S
Sbjct: 2 MADESFDLESLGSDEIFEGV-NLDELEQQAQTQVQAQSSQVVVPSEKQKQ--NLNLPNSY 58
Query: 313 VLSSNCLRSDRRSTDAS 363
SS +R ++ AS
Sbjct: 59 TNSSQKVRESTVNSQAS 75
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 EIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGI-SERRANALQNE 685
++ L NAE++K+ R + +++DL ++L + SE+R N L+ +
Sbjct: 89 KLQLTETKCRNAESEKS--RVENELEDLTSSLFEEANRMVANARKETVASEKRVNQLKKQ 146
Query: 686 LEESRTLL 709
L ++ TLL
Sbjct: 147 LVDAETLL 154
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 65 TPPNCSASRVPTKKARNSSRLSAARTRTLPTKSRTSWTRSAKV 193
+PPN +R P + NS+ + T++ ++ S +RSA++
Sbjct: 190 SPPNSRTARKPVPRRANSASHNLGSTKSPNGNAKESLSRSAEL 232
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = +1
Query: 202 IHEIEKARKRL-----EAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDA-- 360
+ E+E+ KRL E + L+ P K K+ ++ T S + +D T A
Sbjct: 758 VEELEEKAKRLQELTYEYLRRSLQQPKLKAKKGASSSSTAESKVEDETFTNDIEPTTALN 817
Query: 361 SKRRRKNSKTHARTTSVPST 420
S ++ K+ A T PS+
Sbjct: 818 STSTQETEKSRASVTQRPSS 837
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 633 PANSSASRSVAPMLFRTNWKSPAHSWSRPTAPVARPS--RNSATPRATQRALRT 788
P N+ R+V P+L R++ +P+ P AP S +NS+ PR + R+
Sbjct: 539 PGNTPGHRNVPPILKRSSIGTPSQQAYFPDAPHNCHSVPQNSSYPRPPMQVNRS 592
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 43 SQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKA 222
+QK+ + E ++G+ + G+E+LE + D+ KDL++ E I + E
Sbjct: 119 TQKQIEDLKKEKEEMEGSLQ-GKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECE 177
Query: 223 RKRLEAEK 246
+ LE +K
Sbjct: 178 KSWLEQQK 185
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 31 ELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDL 171
+LD K N T+L Y E +QLEA ++E L D +K +
Sbjct: 659 KLDLEYK-INNSKTQLATATEEYHEHSKQLEAEKQELSKLEDGLKSV 704
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 570 TRHKSRICRPLSRRSSAPVTMPANSSASRSVA 665
T H RIC+ +SR+++AP P SS + + A
Sbjct: 146 TPHVIRICKSVSRQNAAPA--PTASSFAHTTA 175
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 7.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 597 PLSRRSSAPVTMPANSSASRS-----VAPMLFRTNWKSPAHSWSRPTAPVARPSRNSATP 761
P ++R S+ +PANS S + P + + S S PT+PVA S N+
Sbjct: 184 PAAQRRSSSYMVPANSRGSPANYNTPYYPTAIPPPIEEYSPSVSLPTSPVAEESYNNVQR 243
Query: 762 RATQR 776
+T R
Sbjct: 244 SSTVR 248
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 223 RKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRK 378
R+RLE EK E PK+L+ + ++ S ++R+T KR+ K
Sbjct: 495 RRRLEVEKTE-------PKKLARPAKIKNEAWSKQKEVKEKRNTRREKRKSK 539
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 107 ARNSSRLSAARTRTLPTKSRTSWTRSAKVAATSTKSRK 220
A N+ R+ +A LP+ S +SW ++T T S K
Sbjct: 190 AFNTIRILSAIPSPLPSSSTSSWADEPSPSSTETSSIK 227
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 301 TRSSVLSSNCLRSDRRSTDASKRRRKNSKTHARTTSV 411
T +S+ SSN L R ST+ K R+KN T++ +
Sbjct: 121 TVNSLSSSNQLSVIRSSTNTVKGRKKNPTTNSNWNGI 157
>SPCC965.11c |||amino acid transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 84 AEQFGGVVAAFLLAGIEF 31
A FGG+V+AF+ AG+ F
Sbjct: 222 AHGFGGIVSAFVYAGVFF 239
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 521 DHANKANAEAQKNIKRYQAQIKDLQTAL 604
D+ N + +A KN+K YQ + DLQ +L
Sbjct: 661 DYRN-SRLDAIKNVKTYQIKFSDLQESL 687
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 25.8 bits (54), Expect = 7.1
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 109 QEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKD-----ELRPP 264
+E+ ++ ++DE+ D D I E IE K LEAEKD LRPP
Sbjct: 26 EEEPDSESTIKSRVSDEI-DEHDSIPEQSNTEKSIEINDKNLEAEKDIESNLSLRPP 81
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 25.8 bits (54), Expect = 7.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 157 EVKDLLDQIGEGGRNIHEIEKARKR-LEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCL 333
+V+D ++ E + E A + ++ KD+ KKPK+ + K SS SS+
Sbjct: 869 DVEDAIEAEDEMLEEASDSEAANEEDIDLSKDKFISVPKKPKKRTKAKAEASS--SSSTS 926
Query: 334 RSDRRST 354
R R+ T
Sbjct: 927 RRSRKKT 933
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 208 EIEKARKRLEAEKDELRPPSKKPKRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRKNS 384
E E+ + ++ + D L + ++L +++T L CL+ D + +RK+S
Sbjct: 575 EQEEQERDMKIQLDLLEELQSRVQKLVPERQTTLQALQQKCLQDDISESLMQNSKRKDS 633
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 171 EVLDFVGKVLVLAADSLELFLAFFVGTLEAEQFGG 67
++ +FV VL L DS++ LA ++ ++FGG
Sbjct: 999 QIQEFVQTVLALNQDSIKFKLALRDFLIQLKEFGG 1033
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 109 QEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELRPPSKK-PKRL 285
+E + +++ E N+ ++ L + ++++EK+ E KDEL K ++L
Sbjct: 694 EEAISSLQLEKSNIQLQLTSLTSERSLALEKLNDLEKSLVLSERSKDELDESYKSLQEQL 753
Query: 286 SNKK 297
++KK
Sbjct: 754 ASKK 757
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.126 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,718
Number of Sequences: 5004
Number of extensions: 42140
Number of successful extensions: 269
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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