Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0725.Seq
(790 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 35 0.003
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 35 0.003
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 33 0.008
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 29 0.12
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 27 0.66
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 27 0.87
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 25 2.0
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 25 2.0
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 25 2.0
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 25 2.0
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 25 2.7
AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical prote... 25 2.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 3.5
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 25 3.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 8.1
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.003
Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Frame = +2
Query: 8 SRSTTLLPNSMPARRNA----ATTPPNCSASRVPTKKARNSSRLSAARTRTLPTKSRTSW 175
S STT +S P+ + + P+ S S+ + +S+ S++ TLPT S
Sbjct: 11 SSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP- 69
Query: 176 TRSAKVAATSTKSRKPGSVXXXXXXXXXXXXXXXXXXXXXXEQGPPCSARTVSGQTGDRQ 355
R+A ++ S ++ K G P T SG TG RQ
Sbjct: 70 -RAAGSSSNSRRNSKQLQRDELAAKMGKHDMKRGISQRSSDAGGEPSRRWTRSGATGRRQ 128
Query: 356 THPREGGRI 382
HP GR+
Sbjct: 129 PHPYRAGRV 137
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.003
Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Frame = +2
Query: 8 SRSTTLLPNSMPARRNA----ATTPPNCSASRVPTKKARNSSRLSAARTRTLPTKSRTSW 175
S STT +S P+ + + P+ S S+ + +S+ S++ TLPT S
Sbjct: 11 SSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP- 69
Query: 176 TRSAKVAATSTKSRKPGSVXXXXXXXXXXXXXXXXXXXXXXEQGPPCSARTVSGQTGDRQ 355
R+A ++ S ++ K G P T SG TG RQ
Sbjct: 70 -RAAGSSSNSRRNSKQLQRDELAAKMGKHDMKRGISQRSSDAGGEPSRRWTRSGATGRRQ 128
Query: 356 THPREGGRI 382
HP GR+
Sbjct: 129 PHPYRAGRV 137
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.008
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +1
Query: 82 RLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGR-NIHEIEKARKRLEAEKDELR 258
RLK +E +++ +R E E +LL++ R NI +E+ R R+E EK ++R
Sbjct: 147 RLKQRFEAERKRTRVIRTEEYIPTQE--ELLEEAEITERENIKSLERFR-RMELEKQKIR 203
Query: 259 PPSKK---P--KRLSNKKRTRSSVLSSNCLRSDRRSTDASKRRRKNSKTHARTTSVPST 420
P +KK P + S V SN +D + N KT +TT + T
Sbjct: 204 PTNKKFTGPTIRYFSTAMPIIEEVYDSNTEVDPLSISDPKEAEDTNDKTSKKTTLMEVT 262
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 29.5 bits (63), Expect = 0.12
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 8 SRSTTLLPNSMPARRNAATTPPNCSASRVPTKKARNSSRLSAARTRTLPTKSRTSWTRSA 187
SRS +L +S R+ + + S SR ++R S S ++TRT ++SRT
Sbjct: 408 SRSKSLSKSSRSRSRSLSRSVSR-SRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPARG 466
Query: 188 KVAATSTKSRKP 223
V A T+ P
Sbjct: 467 HVRARLTRRTIP 478
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 27.1 bits (57), Expect = 0.66
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Frame = +2
Query: 545 EAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLL----- 709
E + + + Q +K LQ L + E L+ ELE SRT+L
Sbjct: 741 EMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQK 800
Query: 710 ----EQA--DRARRQAEQELSDAQS 766
EQA D+ RR +QE AQ+
Sbjct: 801 GIEEEQAKLDQVRRTVQQEEQTAQA 825
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 26.6 bits (56), Expect = 0.87
Identities = 29/140 (20%), Positives = 56/140 (40%)
Frame = +3
Query: 9 QGRRPCCRTRCQPEGMPQLLHRIVPPQGCLRRRPGTARGCPPREQEPCRRSQGPPGPDRR 188
Q +RP + + Q + Q R VPPQ LR++ + ++Q+ +R Q R+
Sbjct: 275 QQQRPRQQQQQQQQQQQQQGERYVPPQ--LRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQ 332
Query: 189 RWPQHPRNRESQEASRGREGRXXXXXXXXXXXXXXXXNKVLRAQLELSQVRQEIDRRIQE 368
Q R ++ Q+ + R+ + + + Q + Q RQ + R Q
Sbjct: 333 ---QQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQT 389
Query: 369 KEEEFENTRKNHQRALDSMQ 428
+ + ++ Q+ S Q
Sbjct: 390 QLQLSPRLQQQQQQQQQSQQ 409
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 25.4 bits (53), Expect = 2.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 675 FRTNWKSPAHSWSRPTAPVARPSRNSATPRA 767
+ N + WSRPT P P R S A
Sbjct: 178 YYVNHYTKTTQWSRPTEPAGPPVRQSGNNNA 208
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
protein.
Length = 1344
Score = 25.4 bits (53), Expect = 2.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 718 RPRPS-PGRAGTQRRPEQLNELSAQ 789
RP P PG AGT+ + L++L AQ
Sbjct: 932 RPAPGVPGAAGTRNLSDNLSDLRAQ 956
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 25.4 bits (53), Expect = 2.0
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 120 RGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRESQEA 230
R PP C R++ RRR + R +++ EA
Sbjct: 171 RNAPPERGHRCGRTESDNAKTRRRTRHNTRTKKAAEA 207
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 25.4 bits (53), Expect = 2.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 46 QKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQ 180
+K C Y L+ Y E +E L VR ++L + DQ
Sbjct: 229 KKVCAGYHASLYPCPNEYNEREEMLRGVRTRIEDLKMVLGQTQDQ 273
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 117 ARGCPPREQEPCRRSQGPPGPDRR 188
A G P +++ R + PP PDRR
Sbjct: 131 AEGAPKPQRKLSDRGEPPPKPDRR 154
>AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 25.0 bits (52), Expect = 2.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 120 RGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRESQEA 230
R PP C R++ RRR + R +++ EA
Sbjct: 171 RNAPPERGHRCGRTESDNAKTRRRARHNTRTKKAAEA 207
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 24.6 bits (51), Expect = 3.5
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 165 GPPGPDRRRWPQHPRNRESQEASRGREGR 251
GP GP PQ P+ + + +G G+
Sbjct: 414 GPKGPRGYEGPQGPKGMDGFDGEKGERGQ 442
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 24.6 bits (51), Expect = 3.5
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +1
Query: 112 EQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELRPPSKKPKRLSN 291
+QL+ R++ +A+E + L ++ EG + E+ R LEA K+ R + + R++
Sbjct: 260 QQLQRQRKQEL-IAEEQQSL--EVIEGEMRRQQ-EQDRAALEASKEMRRKNALEAIRMAE 315
Query: 292 KKRTR 306
+RTR
Sbjct: 316 DRRTR 320
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 8.1
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 42 QPEGMPQLLHRIVPPQGCLRRRPGTARGCPPRE--QEPCRRSQGPP 173
QP G+P + +PP +PG P + Q P Q PP
Sbjct: 220 QPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPP 265
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.309 0.126 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,879
Number of Sequences: 2352
Number of extensions: 12079
Number of successful extensions: 45
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -