Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0721.Seq
(783 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21167| Best HMM Match : KH_1 (HMM E-Value=0) 86 3e-17
SB_1284| Best HMM Match : KH_1 (HMM E-Value=1.2e-07) 40 0.003
SB_35585| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41) 31 1.1
SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30) 31 1.4
SB_50528| Best HMM Match : Flavi_propep (HMM E-Value=8.5) 30 1.8
SB_42869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_53788| Best HMM Match : KH_1 (HMM E-Value=0) 29 5.6
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20) 28 9.8
SB_25283| Best HMM Match : LIM (HMM E-Value=1.1) 28 9.8
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 28 9.8
SB_30086| Best HMM Match : LIM (HMM E-Value=0.5) 28 9.8
SB_20444| Best HMM Match : F-box (HMM E-Value=5.2) 28 9.8
SB_20087| Best HMM Match : DUF1131 (HMM E-Value=1.3) 28 9.8
>SB_21167| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 1650
Score = 86.2 bits (204), Expect = 3e-17
Identities = 38/73 (52%), Positives = 55/73 (75%)
Frame = +2
Query: 293 DNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNA 472
++Q E+ IDPR+HRRLIG +G+ +R++M++YKVDIRFP+ + VVI+G E +V A
Sbjct: 1110 EDQVSVELTIDPRIHRRLIGAKGRAVRKLMEQYKVDIRFPRQNANDPVVISGQEQDVEEA 1169
Query: 473 KEHLLNLAEEYLK 511
KE LL L EEY++
Sbjct: 1170 KEQLLLLEEEYMQ 1182
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+VE A +AL K+AE+E E EDR LRSF++ KVD +YHP +IG+ G VIT IR + V
Sbjct: 970 NVERAMKALEAKVAEIEAENEDRALRSFKMDVKVDRQYHPKIIGRKGQVITNIRKQYDVN 1029
Query: 183 INLPKRGEPDD--DIITIQGYE 242
I P + P++ D+I + GY+
Sbjct: 1030 IQFPPQDAPEESADVIGLTGYQ 1051
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ L E + EKE L S+ ++ + PE+H +IG+GG+ I K+R + G +I
Sbjct: 715 VEKAKKQLLE----LTNEKE---LGSYTVEIRAKPEHHRFLIGRGGASIRKVRENTGARI 767
Query: 186 NLPKRGEPDDDIITIQGYEDKAHRLK 263
P + D ++ITI G ++ K
Sbjct: 768 VFPAAKDEDKELITIIGKQEAVEAAK 793
Score = 45.6 bits (103), Expect = 5e-05
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLD-NQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + ++ + Y E+ P HR LIG G +IR++ + I FP K D
Sbjct: 718 AKKQLLELTNEKELGSYTVEIRAKPEHHRFLIGRGGASIRKVRENTGARIVFPAAKDEDK 777
Query: 428 SIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLLWVISAL 568
++ I G ++ V AK+ LL ++ L + V RQ ++ ++ L
Sbjct: 778 ELITIIGKQEAVEAAKDELLKSIKD-LGAKECVEGARQRVMEIVQEL 823
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/111 (27%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Frame = +2
Query: 302 YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDS--IVVITGDEDNVLN 469
++ +V +D + H ++IG +G+ I I +Y V+I+FP ++S ++ +TG + +
Sbjct: 997 FKMDVKVDRQYHPKIIGRKGQVITNIRKQYDVNIQFPPQDAPEESADVIGLTGYQHSCEA 1056
Query: 470 AKEHLLNLAEEYLKMS-QTVIN------RRQHLLWVISALY-WERKIQTHR 598
A++ +L + +E ++ S Q+ N R+ H+ + ALY W R T R
Sbjct: 1057 ARDAILKIVKELVRPSVQSACNTEIQQQRQLHMAFFPLALYNWHRISATQR 1107
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD-DSI 433
A+ +M IV +L++ E I HR ++G +G N++ + +KV I+FP
Sbjct: 812 ARQRVMEIVQELESMVTIECVIPQEFHRNIMGAKGANVQEVTARHKVQIKFPDRSPAGEE 871
Query: 434 VVITGDEDNV 463
V+ GD +++
Sbjct: 872 PVVNGDGEHL 881
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 308 EEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVLNAKEHL 484
E++ I HR +IG +G N+R++MDE+ V+I P D+S V + G NV A + L
Sbjct: 919 EQMHIPFDYHRFVIGPKGSNVRKMMDEFSVNISIPPAKDESDSVSVIGPRANVERAMKAL 978
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 111 EYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
++H VIG+GG+ I KIR + +I LP G D D+I I G++
Sbjct: 597 QFHKNVIGRGGTTIKKIREETDTKIELPAEGS-DSDVIIITGHK 639
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+V K + + A + + ED+ ++ + +V H ++G G I +I GV
Sbjct: 311 TVAGEKDGVAQAKAMILEIYEDKKRKTTTVSIEVRKSQHKYIVGPRGGTIHEILELTGVS 370
Query: 183 INLPKRGEPDDDIITIQGYEDK 248
+ +P + D + IT++G +DK
Sbjct: 371 VEMPP-SDSDSETITLRGEQDK 391
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 EKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ +A+ + +L +++ ++ E+H ++GKGG + + +I +P+ G
Sbjct: 178 DTVAKARRLVLSQLQTQAQIEIQIPREHHKFILGKGGKTLQTMELSTATKITMPRDGSDT 237
Query: 213 DDII-TIQGYEDKAHRLK 263
II T +G + H ++
Sbjct: 238 IKIIGTKEGVDRARHEIQ 255
Score = 34.7 bits (76), Expect = 0.085
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 21 QALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDF-GVQINLPK 197
+A EKI ++ E L +L+ + ++H +IG G +I + D GV I P
Sbjct: 643 EAAREKILAIQNE----LANVTQLEVHIPSKFHNSIIGAKGRLIRSVMEDCGGVSIKFPP 698
Query: 198 RGEPDDDIITIQGYEDKAHRLK 263
G D ++ I+G +D + K
Sbjct: 699 EGSNSDKVL-IRGPKDDVEKAK 719
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 326 PR-VHRRLIGLRGKNIRRI-MDEYKVDIRFPKHGDDSIVVITGDEDNVLNAKEHL 484
PR +HR +IG RG+NIR++ D KV + F D + + G + V +A+E L
Sbjct: 414 PRWLHRFIIGRRGQNIRKVTQDLPKVHVEFSDEKDS--ITLEGPPEQVESARESL 466
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 111 EYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITI 230
+YH VIG GS + K+ +F V I++P + D + I
Sbjct: 926 DYHRFVIGPKGSNVRKMMDEFSVNISIPPAKDESDSVSVI 965
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/82 (20%), Positives = 36/82 (43%)
Frame = +3
Query: 18 KQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPK 197
K+ + E++ + + +FE + + +HP + G +I+ G IN+P
Sbjct: 244 KEGVDRARHEIQLISDQQAKLAFE-RLAIPKTFHPFISGPNNETANRIKEQTGAAINIPP 302
Query: 198 RGEPDDDIITIQGYEDKAHRLK 263
D+ +T+ G +D + K
Sbjct: 303 PSVNKDE-LTVAGEKDGVAQAK 323
>SB_1284| Best HMM Match : KH_1 (HMM E-Value=1.2e-07)
Length = 333
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 278 IVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDED 457
+V N ++ + I VHR +IG +G R+I + I P+ G +VITG
Sbjct: 60 LVESTANGFKSSMGISCEVHRFIIGYKGNTKRQIEQDTNTRISIPRVGQTGDIVITGQSK 119
Query: 458 NVLNAKEHLLNLAEE 502
+ + H +++ E
Sbjct: 120 AEVLSARHKVDIVVE 134
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 84 FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQ 233
F+ + E H +IG G+ +I D +I++P+ G+ D +IT Q
Sbjct: 68 FKSSMGISCEVHRFIIGYKGNTKRQIEQDTNTRISIPRVGQTGDIVITGQ 117
>SB_35585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 36.7 bits (81), Expect = 0.021
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 72 LLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINL-PKRGEPD--DDIITIQGYE 242
LL EL+ V + VIGKGG I +I+ + G ++ P + P+ D + T+QG +
Sbjct: 209 LLTEKELEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKDNPNSSDRMATVQGSQ 268
Query: 243 DKAHRLK 263
++ +++
Sbjct: 269 EQIQKVE 275
>SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP 412
AK+ +MA++ ++ ++D+ H +IG G NI+++M + I FP
Sbjct: 327 AKEKVMAVLDTKSSRVTLKMDVSHTDHSHIIGKGGYNIKKVMQDTGCHIHFP 378
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDD--SIVVITGDEDNVLNAKEH 481
++DI P+ H +IG G NI+ I + + FP +G +V ++G ++V+ A+
Sbjct: 473 QIDIAPQHHLFIIGKNGANIKHITQQTGASVNFPDPNGTQRKGVVFLSGSVESVICARAQ 532
Query: 482 LLN 490
LL+
Sbjct: 533 LLD 535
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 48 MEKEKEDRLL--RSFELKFKVDPEY--HPLVIGKGGSVITKIRTDFGVQINLP 194
M KEK +L +S + K+D + H +IGKGG I K+ D G I+ P
Sbjct: 326 MAKEKVMAVLDTKSSRVTLKMDVSHTDHSHIIGKGGYNIKKVMQDTGCHIHFP 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 90 LKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLP 194
++ + P++H +IGK G+ I I G +N P
Sbjct: 472 MQIDIAPQHHLFIIGKNGANIKHITQQTGASVNFP 506
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +3
Query: 18 KQALTEKIAEMEKEKEDR--LLRSFE--LKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
+Q L E E ++E+ ++ + FE L+ KV ++IG+GG+ I KI+ + G I
Sbjct: 30 RQGLREYEEEDDEEETEQTSVATVFETSLELKVPASVSGVIIGRGGANIKKIQKETGTYI 89
Query: 186 NLPKRGEPDD 215
N EP +
Sbjct: 90 NFKDDDEPKE 99
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 553 GDFGAVLGAENPNAPAGPGFVVKGGPWEQRAPD 651
G + A G +PN P GF GG W R D
Sbjct: 2305 GSYCAGYGRTSPNGPCDAGFYCSGGSWSNRPGD 2337
>SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41)
Length = 487
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITI 230
+IGKGG+ I ++RT++ +N+P ++ ++TI
Sbjct: 67 IIGKGGTNIRRLRTEYNAVVNVPDTNS-NERVLTI 100
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 344 LIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLN 469
+IG G NIRR+ EY + P + ++ ++ IT + L+
Sbjct: 67 IIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTITAPRQSALD 109
>SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30)
Length = 379
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEP 209
+IGKGG+ I +IR G + P RG P
Sbjct: 103 IIGKGGAKIKEIREVSGASVVFPPRGHP 130
>SB_50528| Best HMM Match : Flavi_propep (HMM E-Value=8.5)
Length = 358
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Frame = +2
Query: 401 IRFPKHGDDSIVVITGDED-----NVLNAKEHLLN 490
+RF +HGD+S +V+ E+ N+L +HLLN
Sbjct: 286 VRFARHGDESSIVVRDREEAAYLTNLLAGTDHLLN 320
>SB_42869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIR-FPKH-GDDS---IVVITGDEDNVLNAK 475
E++ + RLIG +GKN++ I D+ IR P+ G+ S I+ ++GD + +A
Sbjct: 183 EIEFPQILCGRLIGRKGKNVKAISDQSGAKIRLIPQSPGEVSTHRIISLSGDSSQIKSAL 242
Query: 476 EHL 484
+ +
Sbjct: 243 DSI 245
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 532 PPAAPS-LGDFGA--VLGAENP-NAPAGPGFV-VKGGPWEQRAPDTASTHEFPTMPG 687
PP P +G+ GA GA P +P PG KG P Q AP A P +PG
Sbjct: 104 PPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPG 160
>SB_53788| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 356
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 81 SFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGE 206
S L+ V E ++GKGG IT+ G +I + ++GE
Sbjct: 271 SATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGE 312
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 284 HQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGD--- 451
HQ Y E + + RV +R G+RG+N +I D++ K + D++ ++ D
Sbjct: 1199 HQRGRSYAEPIPLGERVFKRNRGVRGRN--KIQDKWEKTVFKVLDRKDNTYIIQPADGSG 1256
Query: 452 EDNVLNAKE 478
E+ +N E
Sbjct: 1257 EEKTVNRGE 1265
>SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 869
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Frame = +2
Query: 404 RFPKHGDDSIVVITGDED-----NVLNAKEHLLN 490
R P+HGD+S +V+ E+ N+L +HLLN
Sbjct: 269 REPRHGDESSIVVRDREEAAYLTNLLAGTDHLLN 302
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -3
Query: 706 RVAAAEHRAWSGTREW----RRCQGRVVPTVHPSLQTRDRPVRLDFPLPVQ 566
++ A+ + ++GTR W R G + PS+ +D+ +++DF PVQ
Sbjct: 849 QINASSFKDYNGTRPWDARLRPADGFSLMAWEPSVTNQDQHLQVDFLSPVQ 899
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 284 HQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGD--- 451
HQ Y E + + RV +R G+RG+N +I D++ K + D++ ++ D
Sbjct: 508 HQRGRSYAEPIPLGERVFKRNRGVRGRN--KIQDKWEKTVFKVLDRKDNTYIIQPADGSG 565
Query: 452 EDNVLNAKE 478
E+ +N E
Sbjct: 566 EEKTVNRGE 574
>SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20)
Length = 1468
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 236 SLNSNDIIIWLSTLG*VDLDTKVCSDFCNDRTTFSY 129
S++ D++ W S + D K+ S C D + F Y
Sbjct: 856 SISHGDVLAWSSFRNSIVGDVKIISSGCEDSSAFDY 891
>SB_25283| Best HMM Match : LIM (HMM E-Value=1.1)
Length = 1097
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +2
Query: 410 PKHGDDSIVVITGDED-----NVLNAKEHLLN 490
P+HGD+S +V+ E+ N+L +HLLN
Sbjct: 576 PRHGDESSIVVRDREEAAYLTNLLAGTDHLLN 607
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 582 FRSQYSAEIT-QRRCCRRLITVCDIFKYSSAKLRRCSLALSTLSSSPVITTILSSPCFGN 406
F+ +Y +IT +R RRL T C+ K + + + S+ + +L T ++ F
Sbjct: 245 FKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 304
Query: 405 LMSTLY 388
L L+
Sbjct: 305 LNQDLF 310
>SB_30086| Best HMM Match : LIM (HMM E-Value=0.5)
Length = 715
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +2
Query: 410 PKHGDDSIVVITGDED-----NVLNAKEHLLN 490
P+HGD+S +V+ E+ N+L +HLLN
Sbjct: 360 PRHGDESSIVVPDREEPAYLTNLLAGTDHLLN 391
>SB_20444| Best HMM Match : F-box (HMM E-Value=5.2)
Length = 332
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 317 PLPLCIDYPVDALLPL-WSL*PMSFIFISL 231
PLP C+ Y ALLPL + L P +F + L
Sbjct: 40 PLPYCLSYITFALLPLPYCLCPSAFALLPL 69
>SB_20087| Best HMM Match : DUF1131 (HMM E-Value=1.3)
Length = 262
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +2
Query: 410 PKHGDDSIVVITGDED-----NVLNAKEHLLN 490
P+HGD+S +V+ E+ N+L +HLLN
Sbjct: 148 PRHGDESSIVVRDREEAAYLTNLLAGTDHLLN 179
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,708,887
Number of Sequences: 59808
Number of extensions: 558229
Number of successful extensions: 1770
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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