Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0721.Seq
         (783 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   4.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   6.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.1  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 368 IRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNA 472
           I R+M+  KV +   + GD    V+T D  N LN+
Sbjct: 538 ITRVMNNGKVALDKKRKGDRLCAVVTVDVRNALNS 572


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 317 DIDPRVHRRLIGLRGKNIRRIMD 385
           D+DP +HR L  +   NI  I+D
Sbjct: 639 DVDPDLHRSLTWILENNITGIID 661


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 385 VHNSPYIFTSQTNQSSVDTWVD 320
           VH  P+ FT +TN + VD + +
Sbjct: 664 VHVEPHCFTHKTNLTRVDLYAN 685


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 353 LRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLN 490
           L+G  +  +M +   D  F KH  +S ++IT  + ++  AK  L+N
Sbjct: 250 LKGYEVTDMMQKALFD--FLKHRFESRIIITRVQADISLAKRSLMN 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,442
Number of Sequences: 2352
Number of extensions: 17970
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)