Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0721.Seq
(783 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 97 8e-20
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 97 8e-20
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 97 8e-20
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 97 8e-20
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 97 8e-20
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 70 1e-11
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 60 1e-08
BC012291-1|AAH12291.1| 357|Homo sapiens ASCC1 protein protein. 40 0.010
AY013290-1|AAG45476.1| 356|Homo sapiens ASC-1 complex subunit P... 40 0.010
AL607035-2|CAI15907.1| 357|Homo sapiens novel protein (CGI-18) ... 40 0.010
AF132952-1|AAD27727.1| 356|Homo sapiens CGI-18 protein protein. 40 0.010
AK094170-1|BAC04299.1| 400|Homo sapiens protein ( Homo sapiens ... 38 0.054
AL607035-3|CAI15908.1| 403|Homo sapiens novel protein (CGI-18) ... 36 0.22
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 34 0.50
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 33 0.88
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 33 0.88
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 33 0.88
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 33 0.88
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 33 0.88
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 33 0.88
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 33 0.88
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 33 0.88
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 33 0.88
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 33 1.2
U94703-1|AAC51321.1| 372|Homo sapiens mitochondrial DNA polymer... 32 2.7
AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein. 32 2.7
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 31 3.5
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 31 3.5
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 31 3.5
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 31 3.5
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 31 3.5
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 31 4.7
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 31 4.7
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 31 4.7
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 31 4.7
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 31 4.7
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 31 4.7
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 31 4.7
AK097864-1|BAC05188.1| 193|Homo sapiens protein ( Homo sapiens ... 31 4.7
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 31 4.7
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 31 4.7
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 31 4.7
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 31 4.7
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 31 6.2
BC113741-1|AAI13742.1| 488|Homo sapiens mex-3 homolog D (C. ele... 31 6.2
BC113384-1|AAI13385.1| 489|Homo sapiens MEX3D protein protein. 31 6.2
BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for IM... 31 6.2
AY950680-1|AAY34148.1| 651|Homo sapiens MEX3D protein. 31 6.2
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 31 6.2
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 31 6.2
AF458084-1|AAQ04763.1| 488|Homo sapiens bcl-2 ARE RNA binding p... 31 6.2
AB107353-1|BAC67658.1| 515|Homo sapiens KIAA2031 protein protein. 31 6.2
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 8.2
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 8.2
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 30 8.2
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 30 8.2
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 30 8.2
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 30 8.2
BX255923-6|CAI94918.1| 92|Homo sapiens COBW domain containing ... 30 8.2
BX255923-5|CAI94917.1| 359|Homo sapiens COBW domain containing ... 30 8.2
BX255923-4|CAI94916.1| 395|Homo sapiens COBW domain containing ... 30 8.2
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 30 8.2
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 8.2
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 30 8.2
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 8.2
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 30 8.2
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 8.2
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 96.7 bits (230), Expect = 8e-20
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDS 430
A+D+I+ IV +L+ E+V +D RVH R+IG RGK IR+IMDE+KVDIRFP+ G D +
Sbjct: 1113 ARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPN 1172
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYL 508
V +TG +NV A +H+LNL EEYL
Sbjct: 1173 CVTVTGLPENVEEAIDHILNLEEEYL 1198
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+++ AK L E++ E++ E+EDR LRSF+L VDP+YHP +IG+ G+VIT+IR + V
Sbjct: 1026 NLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVN 1085
Query: 183 INLPKR--GEPDDDIITIQGYE 242
I P + G D ITI GYE
Sbjct: 1086 IQFPDKDDGNQPQDQITITGYE 1107
Score = 64.1 bits (149), Expect = 5e-10
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYRE-EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS- 430
A++ I +V L N+ E++ID + HR LIG G NI RI D+YKV +R P + S
Sbjct: 420 AQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSN 479
Query: 431 IVVITGDEDNVLNAKEHLLNLAE--EYLKMSQTVINRRQH 544
++ I GD V AK LL LA E + +I +R H
Sbjct: 480 LIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFH 519
Score = 59.7 bits (138), Expect = 1e-08
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ I++I L N EV I ++H LIG +G+ IR IM+E V I FP G S
Sbjct: 639 ARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSD 698
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
VVI G +V AK+ LL+LAEE S TV
Sbjct: 699 TVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 730
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 721 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 780
Query: 243 D 245
D
Sbjct: 781 D 781
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 786 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 845
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 846 KVTLKGAKDCVEAAKKRIQEIIED 869
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
AK ++ + +++N+ +++ I+ R HR +IG +G+ IR I D++ +V I FP S
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD 552
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
IV + G ++ V +++ + + ++ S ++
Sbjct: 553 IVQLRGPKNEVEKCTKYMQKMVADLVENSYSI 584
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLL 487
EV++ +HR +IG +G IR++MDE++V+I P I+ ITG N+ AK LL
Sbjct: 976 EVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLL 1035
Query: 488 NLAEE 502
+E
Sbjct: 1036 ERVKE 1040
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVL 466
++N Y V I + H+ +IG G NI++I +E I P +S ++ITG N
Sbjct: 578 VENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCE 637
Query: 467 NAKEHLLNLAEEYLKMSQTVIN 532
A+ +L++ ++ +++ ++
Sbjct: 638 AARSRILSIQKDLANIAEVEVS 659
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD----DSIVVITGDEDNVLN 469
++ V +DP+ H ++IG +G I +I E+ V+I+FP D + ITG E N
Sbjct: 1053 FKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEA 1112
Query: 470 AKEHLLNLAEEYLKM-SQTV-INRRQH 544
A++ +L + E +M S+ V ++ R H
Sbjct: 1113 ARDAILRIVGELEQMVSEDVPLDHRVH 1139
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 102 VDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAHRLKTP*WQ* 281
+D H +IG G I KI +F V I P+ G PD + +T+ G +
Sbjct: 1134 LDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEE-------- 1185
Query: 282 CINWIINTERKWTSTHVSTE 341
I+ I+N E ++ + V +E
Sbjct: 1186 AIDHILNLEEEYLADVVDSE 1205
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 48 MEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
M+K D + S+ + + ++H +IGKGG+ I KIR + +I+LP + II
Sbjct: 570 MQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETII 628
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 859 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 918
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 919 STEPVVQENGDE 930
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 712 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 771
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 772 DLITIIGKEDAVREAQKEL 790
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 580 ENPNAPAGPGFVVKGGPW----EQRAPDTASTHEFPTMPGXXXXXXXXXXWGPRR 732
E AP+ GFVV+ PW ++APD +S+ EFP+ WGP+R
Sbjct: 1217 EEAKAPSR-GFVVRDAPWTASSSEKAPDMSSSEEFPSF--GAQVAPKTLPWGPKR 1268
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 45 EMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
++E +D + R ++ +D ++H +IGK G+ I +I+ + V + +P E ++I
Sbjct: 423 QIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE-KSNLI 481
Query: 225 TIQG 236
I+G
Sbjct: 482 RIEG 485
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 856 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 907
Query: 186 NLPKRGE 206
P R E
Sbjct: 908 KFPDREE 914
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 332 VHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYL 508
+HR +IG +G+N+ +I + KV I F + G+D I + G ++V A+E + + ++ +
Sbjct: 375 LHRFIIGKKGQNLAKITQQMPKVHIEFTE-GEDKI-TLEGPTEDVNVAQEQIEGMVKDLI 432
Query: 509 -KMSQTVIN 532
+M IN
Sbjct: 433 NRMDYVEIN 441
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 33 EKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ + + K+ RL + E+H VIGK G + + +I +P+ +P
Sbjct: 134 DAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPS 193
Query: 213 DDII---TIQGYEDKAHRL 260
+ I T +G E H +
Sbjct: 194 NQIKITGTKEGIEKARHEV 212
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 96.7 bits (230), Expect = 8e-20
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDS 430
A+D+I+ IV +L+ E+V +D RVH R+IG RGK IR+IMDE+KVDIRFP+ G D +
Sbjct: 434 ARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPN 493
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYL 508
V +TG +NV A +H+LNL EEYL
Sbjct: 494 CVTVTGLPENVEEAIDHILNLEEEYL 519
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+++ AK L E++ E++ E+EDR LRSF+L VDP+YHP +IG+ G+VIT+IR + V
Sbjct: 347 NLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVN 406
Query: 183 INLPKR--GEPDDDIITIQGYE 242
I P + G D ITI GYE
Sbjct: 407 IQFPDKDDGNQPQDQITITGYE 428
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 42 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 101
Query: 243 D 245
D
Sbjct: 102 D 102
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 107 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 166
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 167 KVTLKGAKDCVEAAKKRIQEIIED 190
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLL 487
EV++ +HR +IG +G IR++MDE++V+I P I+ ITG N+ AK LL
Sbjct: 297 EVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLL 356
Query: 488 NLAEE 502
+E
Sbjct: 357 ERVKE 361
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD----DSIVVITGDEDNVLN 469
++ V +DP+ H ++IG +G I +I E+ V+I+FP D + ITG E N
Sbjct: 374 FKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEA 433
Query: 470 AKEHLLNLAEEYLKM-SQTV-INRRQH 544
A++ +L + E +M S+ V ++ R H
Sbjct: 434 ARDAILRIVGELEQMVSEDVPLDHRVH 460
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 102 VDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAHRLKTP*WQ* 281
+D H +IG G I KI +F V I P+ G PD + +T+ G +
Sbjct: 455 LDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEE-------- 506
Query: 282 CINWIINTERKWTSTHVSTE 341
I+ I+N E ++ + V +E
Sbjct: 507 AIDHILNLEEEYLADVVDSE 526
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 180 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 239
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 240 STEPVVQENGDE 251
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 33 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 92
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 93 DLITIIGKEDAVREAQKEL 111
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 580 ENPNAPAGPGFVVKGGPW----EQRAPDTASTHEFPTMPGXXXXXXXXXXWGPRR 732
E AP+ GFVV+ PW ++APD +S+ EFP+ WGP+R
Sbjct: 538 EEAKAPSR-GFVVRDAPWTASSSEKAPDMSSSEEFPSF--GAQVAPKTLPWGPKR 589
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 177 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 228
Query: 186 NLPKRGE 206
P R E
Sbjct: 229 KFPDREE 235
Score = 33.9 bits (74), Expect = 0.66
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 395 VDIRFPKHGDDS-IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
V I FP G S VVI G +V AK+ LL+LAEE S TV
Sbjct: 7 VHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 51
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 96.7 bits (230), Expect = 8e-20
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDS 430
A+D+I+ IV +L+ E+V +D RVH R+IG RGK IR+IMDE+KVDIRFP+ G D +
Sbjct: 743 ARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPN 802
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYL 508
V +TG +NV A +H+LNL EEYL
Sbjct: 803 CVTVTGLPENVEEAIDHILNLEEEYL 828
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+++ AK L E++ E++ E+EDR LRSF+L VDP+YHP +IG+ G+VIT+IR + V
Sbjct: 656 NLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVN 715
Query: 183 INLPKR--GEPDDDIITIQGYE 242
I P + G D ITI GYE
Sbjct: 716 IQFPDKDDGNQPQDQITITGYE 737
Score = 64.1 bits (149), Expect = 5e-10
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYRE-EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS- 430
A++ I +V L N+ E++ID + HR LIG G NI RI D+YKV +R P + S
Sbjct: 50 AQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSN 109
Query: 431 IVVITGDEDNVLNAKEHLLNLAE--EYLKMSQTVINRRQH 544
++ I GD V AK LL LA E + +I +R H
Sbjct: 110 LIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFH 149
Score = 59.7 bits (138), Expect = 1e-08
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ I++I L N EV I ++H LIG +G+ IR IM+E V I FP G S
Sbjct: 269 ARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSD 328
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
VVI G +V AK+ LL+LAEE S TV
Sbjct: 329 TVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 360
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 351 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 410
Query: 243 D 245
D
Sbjct: 411 D 411
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 416 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 475
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 476 KVTLKGAKDCVEAAKKRIQEIIED 499
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
AK ++ + +++N+ +++ I+ R HR +IG +G+ IR I D++ +V I FP S
Sbjct: 123 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD 182
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
IV + G ++ V +++ + + ++ S ++
Sbjct: 183 IVQLRGPKNEVEKCTKYMQKMVADLVENSYSI 214
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLL 487
EV++ +HR +IG +G IR++MDE++V+I P I+ ITG N+ AK LL
Sbjct: 606 EVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLL 665
Query: 488 NLAEE 502
+E
Sbjct: 666 ERVKE 670
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVL 466
++N Y V I + H+ +IG G NI++I +E I P +S ++ITG N
Sbjct: 208 VENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCE 267
Query: 467 NAKEHLLNLAEEYLKMSQTVIN 532
A+ +L++ ++ +++ ++
Sbjct: 268 AARSRILSIQKDLANIAEVEVS 289
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD----DSIVVITGDEDNVLN 469
++ V +DP+ H ++IG +G I +I E+ V+I+FP D + ITG E N
Sbjct: 683 FKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEA 742
Query: 470 AKEHLLNLAEEYLKM-SQTV-INRRQH 544
A++ +L + E +M S+ V ++ R H
Sbjct: 743 ARDAILRIVGELEQMVSEDVPLDHRVH 769
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 102 VDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAHRLKTP*WQ* 281
+D H +IG G I KI +F V I P+ G PD + +T+ G +
Sbjct: 764 LDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEE-------- 815
Query: 282 CINWIINTERKWTSTHVSTE 341
I+ I+N E ++ + V +E
Sbjct: 816 AIDHILNLEEEYLADVVDSE 835
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 48 MEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
M+K D + S+ + + ++H +IGKGG+ I KIR + +I+LP + II
Sbjct: 200 MQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETII 258
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 489 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 548
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 549 STEPVVQENGDE 560
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 342 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 401
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 402 DLITIIGKEDAVREAQKEL 420
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 580 ENPNAPAGPGFVVKGGPW----EQRAPDTASTHEFPTMPGXXXXXXXXXXWGPRR 732
E AP+ GFVV+ PW ++APD +S+ EFP+ WGP+R
Sbjct: 847 EEAKAPSR-GFVVRDAPWTASSSEKAPDMSSSEEFPSF--GAQVAPKTLPWGPKR 898
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 45 EMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
++E +D + R ++ +D ++H +IGK G+ I +I+ + V + +P E ++I
Sbjct: 53 QIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE-KSNLI 111
Query: 225 TIQG 236
I+G
Sbjct: 112 RIEG 115
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 486 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 537
Query: 186 NLPKRGE 206
P R E
Sbjct: 538 KFPDREE 544
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 332 VHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYL 508
+HR +IG +G+N+ +I + KV I F + G+D I + G ++V A+E + + ++ +
Sbjct: 5 LHRFIIGKKGQNLAKITQQMPKVHIEFTE-GEDKI-TLEGPTEDVNVAQEQIEGMVKDLI 62
Query: 509 -KMSQTVIN 532
+M IN
Sbjct: 63 NRMDYVEIN 71
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 96.7 bits (230), Expect = 8e-20
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDS 430
A+D+I+ IV +L+ E+V +D RVH R+IG RGK IR+IMDE+KVDIRFP+ G D +
Sbjct: 1113 ARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPN 1172
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYL 508
V +TG +NV A +H+LNL EEYL
Sbjct: 1173 CVTVTGLPENVEEAIDHILNLEEEYL 1198
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+++ AK L E++ E++ E+EDR LRSF+L VDP+YHP +IG+ G+VIT+IR + V
Sbjct: 1026 NLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVN 1085
Query: 183 INLPKR--GEPDDDIITIQGYE 242
I P + G D ITI GYE
Sbjct: 1086 IQFPDKDDGNQPQDQITITGYE 1107
Score = 64.1 bits (149), Expect = 5e-10
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYRE-EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS- 430
A++ I +V L N+ E++ID + HR LIG G NI RI D+YKV +R P + S
Sbjct: 420 AQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSN 479
Query: 431 IVVITGDEDNVLNAKEHLLNLAE--EYLKMSQTVINRRQH 544
++ I GD V AK LL LA E + +I +R H
Sbjct: 480 LIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFH 519
Score = 59.7 bits (138), Expect = 1e-08
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ I++I L N EV I ++H LIG +G+ IR IM+E V I FP G S
Sbjct: 639 ARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSD 698
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
VVI G +V AK+ LL+LAEE S TV
Sbjct: 699 TVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 730
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 721 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 780
Query: 243 D 245
D
Sbjct: 781 D 781
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 786 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 845
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 846 KVTLKGAKDCVEAAKKRIQEIIED 869
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
AK ++ + +++N+ +++ I+ R HR +IG +G+ IR I D++ +V I FP S
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD 552
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
IV + G ++ V +++ + + ++ S ++
Sbjct: 553 IVQLRGPKNEVEKCTKYMQKMVADLVENSYSI 584
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLL 487
EV++ +HR +IG +G IR++MDE++V+I P I+ ITG N+ AK LL
Sbjct: 976 EVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLL 1035
Query: 488 NLAEE 502
+E
Sbjct: 1036 ERVKE 1040
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVL 466
++N Y V I + H+ +IG G NI++I +E I P +S ++ITG N
Sbjct: 578 VENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCE 637
Query: 467 NAKEHLLNLAEEYLKMSQTVIN 532
A+ +L++ ++ +++ ++
Sbjct: 638 AARSRILSIQKDLANIAEVEVS 659
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD----DSIVVITGDEDNVLN 469
++ V +DP+ H ++IG +G I +I E+ V+I+FP D + ITG E N
Sbjct: 1053 FKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEA 1112
Query: 470 AKEHLLNLAEEYLKM-SQTV-INRRQH 544
A++ +L + E +M S+ V ++ R H
Sbjct: 1113 ARDAILRIVGELEQMVSEDVPLDHRVH 1139
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 102 VDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAHRLKTP*WQ* 281
+D H +IG G I KI +F V I P+ G PD + +T+ G +
Sbjct: 1134 LDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEE-------- 1185
Query: 282 CINWIINTERKWTSTHVSTE 341
I+ I+N E ++ + V +E
Sbjct: 1186 AIDHILNLEEEYLADVVDSE 1205
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 48 MEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
M+K D + S+ + + ++H +IGKGG+ I KIR + +I+LP + II
Sbjct: 570 MQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETII 628
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 859 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 918
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 919 STEPVVQENGDE 930
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 712 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 771
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 772 DLITIIGKEDAVREAQKEL 790
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 580 ENPNAPAGPGFVVKGGPW----EQRAPDTASTHEFPTMPGXXXXXXXXXXWGPRR 732
E AP+ GFVV+ PW ++APD +S+ EFP+ WGP+R
Sbjct: 1217 EEAKAPSR-GFVVRDAPWTASSSEKAPDMSSSEEFPSF--GAQVAPKTLPWGPKR 1268
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 45 EMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
++E +D + R ++ +D ++H +IGK G+ I +I+ + V + +P E ++I
Sbjct: 423 QIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE-KSNLI 481
Query: 225 TIQG 236
I+G
Sbjct: 482 RIEG 485
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 856 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 907
Query: 186 NLPKRGE 206
P R E
Sbjct: 908 KFPDREE 914
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 332 VHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYL 508
+HR +IG +G+N+ +I + KV I F + G+D I + G ++V A+E + + ++ +
Sbjct: 375 LHRFIIGKKGQNLAKITQQMPKVHIEFTE-GEDKI-TLEGPTEDVNVAQEQIEGMVKDLI 432
Query: 509 -KMSQTVIN 532
+M IN
Sbjct: 433 NRMDYVEIN 441
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 33 EKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ + + K+ RL + E+H VIGK G + + +I +P+ +P
Sbjct: 134 DAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPS 193
Query: 213 DDII---TIQGYEDKAHRL 260
+ I T +G E H +
Sbjct: 194 NQIKITGTKEGIEKARHEV 212
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 96.7 bits (230), Expect = 8e-20
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDS 430
A+D+I+ IV +L+ E+V +D RVH R+IG RGK IR+IMDE+KVDIRFP+ G D +
Sbjct: 1113 ARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPN 1172
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYL 508
V +TG +NV A +H+LNL EEYL
Sbjct: 1173 CVTVTGLPENVEEAIDHILNLEEEYL 1198
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+++ AK L E++ E++ E+EDR LRSF+L VDP+YHP +IG+ G+VIT+IR + V
Sbjct: 1026 NLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVN 1085
Query: 183 INLPKR--GEPDDDIITIQGYE 242
I P + G D ITI GYE
Sbjct: 1086 IQFPDKDDGNQPQDQITITGYE 1107
Score = 64.1 bits (149), Expect = 5e-10
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYRE-EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS- 430
A++ I +V L N+ E++ID + HR LIG G NI RI D+YKV +R P + S
Sbjct: 420 AQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSN 479
Query: 431 IVVITGDEDNVLNAKEHLLNLAE--EYLKMSQTVINRRQH 544
++ I GD V AK LL LA E + +I +R H
Sbjct: 480 LIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFH 519
Score = 59.7 bits (138), Expect = 1e-08
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ I++I L N EV I ++H LIG +G+ IR IM+E V I FP G S
Sbjct: 639 ARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSD 698
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
VVI G +V AK+ LL+LAEE S TV
Sbjct: 699 TVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 730
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 721 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 780
Query: 243 D 245
D
Sbjct: 781 D 781
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 786 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 845
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 846 KVTLKGAKDCVEAAKKRIQEIIED 869
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
AK ++ + +++N+ +++ I+ R HR +IG +G+ IR I D++ +V I FP S
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD 552
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
IV + G ++ V +++ + + ++ S ++
Sbjct: 553 IVQLRGPKNEVEKCTKYMQKMVADLVENSYSI 584
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLL 487
EV++ +HR +IG +G IR++MDE++V+I P I+ ITG N+ AK LL
Sbjct: 976 EVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLL 1035
Query: 488 NLAEE 502
+E
Sbjct: 1036 ERVKE 1040
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVL 466
++N Y V I + H+ +IG G NI++I +E I P +S ++ITG N
Sbjct: 578 VENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCE 637
Query: 467 NAKEHLLNLAEEYLKMSQTVIN 532
A+ +L++ ++ +++ ++
Sbjct: 638 AARSRILSIQKDLANIAEVEVS 659
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD----DSIVVITGDEDNVLN 469
++ V +DP+ H ++IG +G I +I E+ V+I+FP D + ITG E N
Sbjct: 1053 FKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEA 1112
Query: 470 AKEHLLNLAEEYLKM-SQTV-INRRQH 544
A++ +L + E +M S+ V ++ R H
Sbjct: 1113 ARDAILRIVGELEQMVSEDVPLDHRVH 1139
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 102 VDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAHRLKTP*WQ* 281
+D H +IG G I KI +F V I P+ G PD + +T+ G +
Sbjct: 1134 LDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEE-------- 1185
Query: 282 CINWIINTERKWTSTHVSTE 341
I+ I+N E ++ + V +E
Sbjct: 1186 AIDHILNLEEEYLADVVDSE 1205
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 48 MEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
M+K D + S+ + + ++H +IGKGG+ I KIR + +I+LP + II
Sbjct: 570 MQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETII 628
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 859 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 918
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 919 STEPVVQENGDE 930
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 712 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 771
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 772 DLITIIGKEDAVREAQKEL 790
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 580 ENPNAPAGPGFVVKGGPW----EQRAPDTASTHEFPTMPGXXXXXXXXXXWGPRR 732
E AP+ GFVV+ PW ++APD +S+ EFP+ WGP+R
Sbjct: 1217 EEAKAPSR-GFVVRDAPWTASSSEKAPDMSSSEEFPSF--GAQVAPKTLPWGPKR 1268
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 45 EMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
++E +D + R ++ +D ++H +IGK G+ I +I+ + V + +P E ++I
Sbjct: 423 QIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE-KSNLI 481
Query: 225 TIQG 236
I+G
Sbjct: 482 RIEG 485
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 856 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 907
Query: 186 NLPKRGE 206
P R E
Sbjct: 908 KFPDREE 914
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 332 VHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYL 508
+HR +IG +G+N+ +I + KV I F + G+D I + G ++V A+E + + ++ +
Sbjct: 375 LHRFIIGKKGQNLAKITQQMPKVHIEFTE-GEDKI-TLEGPTEDVNVAQEQIEGMVKDLI 432
Query: 509 -KMSQTVIN 532
+M IN
Sbjct: 433 NRMDYVEIN 441
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 33 EKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ + + K+ RL + E+H VIGK G + + +I +P+ +P
Sbjct: 134 DAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPS 193
Query: 213 DDII---TIQGYEDKAHRL 260
+ I T +G E H +
Sbjct: 194 NQIKITGTKEGIEKARHEV 212
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+++ AK L E++ E++ E+EDR LRSF+L VDP+YHP +IG+ G+VIT+IR + V
Sbjct: 709 NLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVN 768
Query: 183 I 185
I
Sbjct: 769 I 769
Score = 64.1 bits (149), Expect = 5e-10
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYRE-EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS- 430
A++ I +V L N+ E++ID + HR LIG G NI RI D+YKV +R P + S
Sbjct: 103 AQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSN 162
Query: 431 IVVITGDEDNVLNAKEHLLNLAE--EYLKMSQTVINRRQH 544
++ I GD V AK LL LA E + +I +R H
Sbjct: 163 LIRIEGDPQGVQQAKRELLELASRLENERTKDLIIEQRFH 202
Score = 59.7 bits (138), Expect = 1e-08
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ I++I L N EV I ++H LIG +G+ IR IM+E V I FP G S
Sbjct: 322 ARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSD 381
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
VVI G +V AK+ LL+LAEE S TV
Sbjct: 382 TVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 413
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 404 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 463
Query: 243 D 245
D
Sbjct: 464 D 464
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 469 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 528
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 529 KVTLKGAKDCVEAAKKRIQEIIED 552
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/92 (27%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
AK ++ + +L+N+ +++ I+ R HR +IG +G+ IR I D++ +V I FP S
Sbjct: 176 AKRELLELASRLENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD 235
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
IV + G ++ V +++ + + ++ S ++
Sbjct: 236 IVQLRGPKNEVEKCTKYMQKMVADLVENSYSI 267
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLL 487
EV++ +HR +IG +G IR++MDE++V+I P I+ ITG N+ AK LL
Sbjct: 659 EVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLL 718
Query: 488 NLAEE 502
+E
Sbjct: 719 ERVKE 723
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVL 466
++N Y V I + H+ +IG G NI++I +E I P +S ++ITG N
Sbjct: 261 VENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCE 320
Query: 467 NAKEHLLNLAEEYLKMSQTVIN 532
A+ +L++ ++ +++ ++
Sbjct: 321 AARSRILSIQKDLANIAEVEVS 342
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 48 MEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
M+K D + S+ + + ++H +IGKGG+ I KIR + +I+LP + II
Sbjct: 253 MQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETII 311
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 542 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 601
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 602 STEPVVQENGDE 613
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 395 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 454
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 455 DLITIIGKEDAVREAQKEL 473
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 580 ENPNAPAGPGFVVKGGPW----EQRAPDTASTHEFPTMPGXXXXXXXXXXWGPRR 732
E AP+ GFVV+ PW ++APD +S+ EFP+ WGP+R
Sbjct: 796 EEAKAPSR-GFVVRDAPWTASSSEKAPDMSSSEEFPSF--GAQVAPKTLPWGPKR 847
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 45 EMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
++E +D + R ++ +D ++H +IGK G+ I +I+ + V + +P E ++I
Sbjct: 106 QIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE-KSNLI 164
Query: 225 TIQG 236
I+G
Sbjct: 165 RIEG 168
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 539 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 590
Query: 186 NLPKRGE 206
P R E
Sbjct: 591 KFPDREE 597
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 332 VHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYL 508
+HR +IG +G+N+ +I + KV I F + G+D I + G ++V A+E + + ++ +
Sbjct: 58 LHRFIIGKKGQNLAKITQQMPKVHIEFTE-GEDKI-TLEGPTEDVNVAQEQIEGMVKDLI 115
Query: 509 -KMSQTVIN 532
+M IN
Sbjct: 116 NRMDYVEIN 124
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 59.7 bits (138), Expect = 1e-08
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ I++I L N EV I ++H LIG +G+ IR IM+E V I FP G S
Sbjct: 136 ARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSD 195
Query: 431 IVVITGDEDNVLNAKEHLLNLAEEYLKMSQTV 526
VVI G +V AK+ LL+LAEE S TV
Sbjct: 196 TVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTV 227
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 63 EDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYE 242
E++ +SF + + PEYH +IGKGG I K+R G ++ P + D D+ITI G E
Sbjct: 218 EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE 277
Query: 243 D 245
D
Sbjct: 278 D 278
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS- 430
A+ + A++ LDN + + +DP+ HR + RG+ +R I +EY V + FP+ G S
Sbjct: 283 AQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD 342
Query: 431 IVVITGDEDNVLNAKEHLLNLAEE 502
V + G +D V AK+ + + E+
Sbjct: 343 KVTLKGAKDCVEAAKKRIQEIIED 366
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDS-IVVITGDEDNVL 466
++N Y V I + H+ +IG G NI++I +E I P +S ++ITG N
Sbjct: 75 VENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCE 134
Query: 467 NAKEHLLNLAEEYLKMSQTVIN 532
A+ +L++ ++ +++ ++
Sbjct: 135 AARSRILSIQKDLANIAEVEVS 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDS-IVVITGDEDNV 463
++N+ +++ I+ R HR +IG +G+ IR I D++ +V I FP S IV + G ++ V
Sbjct: 1 MENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEV 60
Query: 464 LNAKEHLLNLAEEYLKMSQTV 526
+++ + + ++ S ++
Sbjct: 61 EKCTKYMQKMVADLVENSYSI 81
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 48 MEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDII 224
M+K D + S+ + + ++H +IGKGG+ I KIR + +I+LP + II
Sbjct: 67 MQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETII 125
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPK------H 418
AK I I+ L+ Q E I + HR ++G +G I++I ++ V I+FP H
Sbjct: 356 AKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVH 415
Query: 419 GDDSIVVITGDE 454
+ +V GDE
Sbjct: 416 STEPVVQENGDE 427
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQ-YREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDD 427
AK ++ + + + + ++ P H+ LIG G IR++ D + FP + D
Sbjct: 209 AKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQ 268
Query: 428 SIVVITGDEDNVLNAKEHL 484
++ I G ED V A++ L
Sbjct: 269 DLITIIGKEDAVREAQKEL 287
Score = 36.3 bits (80), Expect = 0.12
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVD 400
EV++ +HR +IG +G IR++MDE++VD
Sbjct: 473 EVEVPFNLHRYVIGQKGSGIRKMMDEFEVD 502
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AK+ + E I ++E + L+ + ++H V+G GS I +I DF VQI
Sbjct: 353 VEAAKKRIQEIIEDLEAQ--------VTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQI 404
Query: 186 NLPKRGE 206
P R E
Sbjct: 405 KFPDREE 411
>BC012291-1|AAH12291.1| 357|Homo sapiens ASCC1 protein protein.
Length = 357
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 281 VHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDN 460
V Q +R + +++ ++G RG ++I E K I PK G D +VITG N
Sbjct: 52 VEQTPQGFRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRN 111
Query: 461 -VLNAKEHL 484
V++A+ +
Sbjct: 112 GVISARTRI 120
>AY013290-1|AAG45476.1| 356|Homo sapiens ASC-1 complex subunit P50
protein.
Length = 356
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 281 VHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDN 460
V Q +R + +++ ++G RG ++I E K I PK G D +VITG N
Sbjct: 52 VEQTPQGFRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRN 111
Query: 461 -VLNAKEHL 484
V++A+ +
Sbjct: 112 GVISARTRI 120
>AL607035-2|CAI15907.1| 357|Homo sapiens novel protein (CGI-18)
protein.
Length = 357
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 281 VHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDN 460
V Q +R + +++ ++G RG ++I E K I PK G D +VITG N
Sbjct: 52 VEQTPQGFRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRN 111
Query: 461 -VLNAKEHL 484
V++A+ +
Sbjct: 112 GVISARTRI 120
>AF132952-1|AAD27727.1| 356|Homo sapiens CGI-18 protein protein.
Length = 356
Score = 39.9 bits (89), Expect = 0.010
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 281 VHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDN 460
V Q +R + +++ ++G RG ++I E K I PK G D +VITG N
Sbjct: 52 VEQTPQGFRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRN 111
Query: 461 -VLNAKEHL 484
V++A+ +
Sbjct: 112 GVISARTRI 120
>AK094170-1|BAC04299.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ36851 fis, clone ASTRO2014363. ).
Length = 400
Score = 37.5 bits (83), Expect = 0.054
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 338 RRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDN-VLNAKEHL 484
R ++G RG ++I E K I PK G D +VITG N V++A+ +
Sbjct: 99 RHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI 148
>AL607035-3|CAI15908.1| 403|Homo sapiens novel protein (CGI-18)
protein.
Length = 403
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 344 LIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDN-VLNAKEHL 484
++G RG ++I E K I PK G D +VITG N V++A+ +
Sbjct: 104 IVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI 151
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.50
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E++ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQDFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 402 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 367 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 408
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDD-IITIQGYEDK 248
+IGKGG I +IR + G I + + E +D IITI G +D+
Sbjct: 380 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 421
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 28 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 87
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 EMEKEKEDRLLRS----FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
+ME+E+ + R+ EL+ + + VIGKGG I +RTD+ +++P P+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPE 85
>U94703-1|AAC51321.1| 372|Homo sapiens mitochondrial DNA polymerase
accessory subunit precursor protein.
Length = 372
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 660 GGGVRGALFPRSTLHYKP 607
GGGV GA+FP LH+KP
Sbjct: 5 GGGVHGAVFPVDALHHKP 22
>AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein.
Length = 659
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI + I P + + +TG +NV
Sbjct: 323 LPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR 382
Query: 470 AKEHL 484
A+E +
Sbjct: 383 AREEI 387
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI + I P + + +TG +NV
Sbjct: 157 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR 216
Query: 470 AKEHL 484
A+E +
Sbjct: 217 AREEI 221
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI + I P + + +TG +NV
Sbjct: 157 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR 216
Query: 470 AKEHL 484
A+E +
Sbjct: 217 AREEI 221
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI + I P + + +TG +NV
Sbjct: 157 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR 216
Query: 470 AKEHL 484
A+E +
Sbjct: 217 AREEI 221
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI + I P + + +TG +NV
Sbjct: 157 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR 216
Query: 470 AKEHL 484
A+E +
Sbjct: 217 AREEI 221
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI + I P + + +TG +NV
Sbjct: 89 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR 148
Query: 470 AKEHL 484
A+E +
Sbjct: 149 AREEI 153
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Frame = +2
Query: 266 SIMAIVHQ--LDNQYREEVDIDPRVHR----RLIGLRGKNIRRIMDEYKVDI------RF 409
SI+ I+H+ D ++ EE+ + H RLIG G+N+++I + I
Sbjct: 259 SILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL 318
Query: 410 PKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLL 550
+ + + + G+ + A+E ++ E + +N + HL+
Sbjct: 319 TLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLI 365
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Frame = +2
Query: 266 SIMAIVHQ--LDNQYREEVDIDPRVHR----RLIGLRGKNIRRIMDEYKVDI------RF 409
SI+ I+H+ D ++ EE+ + H RLIG G+N+++I + I
Sbjct: 259 SILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL 318
Query: 410 PKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLL 550
+ + + + G+ + A+E ++ E + +N + HL+
Sbjct: 319 TLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLI 365
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINL----PKRGEPDDDIITIQG 236
E F V L+IGKGG I I G +I L P +P+ + TI+G
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRG 431
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Frame = +2
Query: 266 SIMAIVHQ--LDNQYREEVDIDPRVHR----RLIGLRGKNIRRIMDEYKVDI------RF 409
SI+ I+H+ D ++ EE+ + H RLIG G+N+++I + I
Sbjct: 259 SILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL 318
Query: 410 PKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLL 550
+ + + + G+ + A+E ++ E + +N + HL+
Sbjct: 319 TLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLI 365
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINL----PKRGEPDDDIITIQG 236
E F V L+IGKGG I I G +I L P +P+ + TI+G
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRG 430
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYED 245
+IGK G + K+R + G +IN+ G + I+TI G D
Sbjct: 28 IIGKKGETVKKMREESGARINI-SEGNCPERIVTITGPTD 66
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYED 245
+IGK G + K+R + G +IN+ G + I+TI G D
Sbjct: 28 IIGKKGETVKKMREESGARINI-SEGNCPERIVTITGPTD 66
>AK097864-1|BAC05188.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ40545 fis, clone THYMU2001195. ).
Length = 193
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 735 LATRSPSGWRGLRLLSTGHGRELVSGGGVRGAL-FPRSTLHYKP 607
LA P GW +RLL R L G AL PR+T H++P
Sbjct: 74 LAVAGPQGWPAVRLLREAPLRGLGDPGARLSALEGPRATRHHRP 117
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYED 245
+IGK G + K+R + G +IN+ G + I+TI G D
Sbjct: 60 IIGKKGETVKKMREESGARINI-SEGNCPERIVTITGPTD 98
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYED 245
+IGK G + K+R + G +IN+ G + I+TI G D
Sbjct: 28 IIGKKGETVKKMREESGARINI-SEGNCPERIVTITGPTD 66
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Frame = +2
Query: 266 SIMAIVHQ--LDNQYREEVDIDPRVHR----RLIGLRGKNIRRIMDEYKVDI------RF 409
SI+ I+H+ D ++ EE+ + H RLIG G+N+++I + I
Sbjct: 259 SILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL 318
Query: 410 PKHGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLL 550
+ + + + G+ + A+E ++ E + +N + HL+
Sbjct: 319 TLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLI 365
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINL----PKRGEPDDDIITIQG 236
E F V L+IGKGG I I G +I L P +P+ + TI+G
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRG 281
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 30.7 bits (66), Expect = 6.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDD 218
E+ + V + LVIGKGG I I G + L + P+ D
Sbjct: 384 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 427
>BC113741-1|AAI13742.1| 488|Homo sapiens mex-3 homolog D (C.
elegans) protein.
Length = 488
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI I P + + +TG +NV
Sbjct: 92 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDR 151
Query: 470 AKEHL 484
A+E +
Sbjct: 152 AREEI 156
>BC113384-1|AAI13385.1| 489|Homo sapiens MEX3D protein protein.
Length = 489
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI I P + + +TG +NV
Sbjct: 93 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDR 152
Query: 470 AKEHL 484
A+E +
Sbjct: 153 AREEI 157
>BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for
IMAGE:3456579) protein.
Length = 372
Score = 30.7 bits (66), Expect = 6.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDD 218
E+ + V + LVIGKGG I I G + L + P+ D
Sbjct: 112 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 155
>AY950680-1|AAY34148.1| 651|Homo sapiens MEX3D protein.
Length = 651
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI I P + + +TG +NV
Sbjct: 270 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDR 329
Query: 470 AKEHL 484
A+E +
Sbjct: 330 AREEI 334
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDD 218
E+ + V + LVIGKGG I I G + L + P+ D
Sbjct: 356 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 399
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 87 ELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDD 218
E+ + V + LVIGKGG I I G + L + P+ D
Sbjct: 356 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 399
>AF458084-1|AAQ04763.1| 488|Homo sapiens bcl-2 ARE RNA binding
protein protein.
Length = 488
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI I P + + +TG +NV
Sbjct: 92 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDR 151
Query: 470 AKEHL 484
A+E +
Sbjct: 152 AREEI 156
>AB107353-1|BAC67658.1| 515|Homo sapiens KIAA2031 protein protein.
Length = 515
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 290 LDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLN 469
L Q +V + RV ++G +G I+RI I P + + +TG +NV
Sbjct: 134 LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDR 193
Query: 470 AKEHL 484
A+E +
Sbjct: 194 AREEI 198
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 677 VGNS*VEAVSGARCSHGPPFTTN-PGPAGAFGFSAPS 570
+GN GAR S GPP T PG AG G PS
Sbjct: 853 IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 889
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 677 VGNS*VEAVSGARCSHGPPFTTN-PGPAGAFGFSAPS 570
+GN GAR S GPP T PG AG G PS
Sbjct: 853 IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 889
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINL-PKRGEPDDDIITIQGYEDKAHRLK 263
L+IG+GG I KI+ D G ++ + P G + +++ G + + K
Sbjct: 158 LIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 78 RSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEP---DDDIITIQGYEDK 248
R+ + K V L+IGKGG+ + + G + L ++ E + ++T+ G ++
Sbjct: 135 RAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ 194
Query: 249 AHR 257
H+
Sbjct: 195 VHK 197
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINL-PKRGEPDDDIITIQGYEDKAHRLK 263
L+IG+GG I KI+ D G ++ + P G + +++ G + + K
Sbjct: 102 LIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 149
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 677 VGNS*VEAVSGARCSHGPPFTTN-PGPAGAFGFSAPS 570
+GN GAR S GPP T PG AG G PS
Sbjct: 429 IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 465
>BX255923-6|CAI94918.1| 92|Homo sapiens COBW domain containing 6
protein.
Length = 92
Score = 30.3 bits (65), Expect = 8.2
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 416 HGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLLWVI 559
H D SIV IT D NAKE LN+ + L + V N+ H + VI
Sbjct: 27 HLDQSIVTITFDVPG--NAKEEHLNMFIQNLLWEKNVRNKDNHCMEVI 72
>BX255923-5|CAI94917.1| 359|Homo sapiens COBW domain containing 6
protein.
Length = 359
Score = 30.3 bits (65), Expect = 8.2
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 416 HGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLLWVI 559
H D SIV IT D NAKE LN+ + L + V N+ H + VI
Sbjct: 233 HLDQSIVTITFDVPG--NAKEEHLNMFIQNLLWEKNVRNKDNHCMEVI 278
>BX255923-4|CAI94916.1| 395|Homo sapiens COBW domain containing 6
protein.
Length = 395
Score = 30.3 bits (65), Expect = 8.2
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 416 HGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMSQTVINRRQHLLWVI 559
H D SIV IT D NAKE LN+ + L + V N+ H + VI
Sbjct: 269 HLDQSIVTITFDVPG--NAKEEHLNMFIQNLLWEKNVRNKDNHCMEVI 314
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINL-PKRGEPDDDIITIQGYEDKAHRLK 263
L+IG+GG I KI+ D G ++ + P G + +++ G + + K
Sbjct: 158 LIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 677 VGNS*VEAVSGARCSHGPPFTTN-PGPAGAFGFSAPS 570
+GN GAR S GPP T PG AG G PS
Sbjct: 853 IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 889
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 78 RSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEP---DDDIITIQGYEDK 248
R+ + K V L+IGKGG+ + + G + L ++ E + ++T+ G ++
Sbjct: 129 RAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ 188
Query: 249 AHR 257
H+
Sbjct: 189 VHK 191
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 677 VGNS*VEAVSGARCSHGPPFTTN-PGPAGAFGFSAPS 570
+GN GAR S GPP T PG AG G PS
Sbjct: 850 IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 886
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 78 RSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEP---DDDIITIQGYEDK 248
R+ + K V L+IGKGG+ + + G + L ++ E + ++T+ G ++
Sbjct: 101 RAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ 160
Query: 249 AHR 257
H+
Sbjct: 161 VHK 163
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 677 VGNS*VEAVSGARCSHGPPFTTN-PGPAGAFGFSAPS 570
+GN GAR S GPP T PG AG G PS
Sbjct: 856 IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 892
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,235,684
Number of Sequences: 237096
Number of extensions: 2743844
Number of successful extensions: 8340
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 7350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8295
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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