Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0721.Seq
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 39 0.004
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 39 0.004
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 35 0.075
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 35 0.075
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 35 0.075
U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 32 0.40
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 31 0.70
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 31 0.70
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 31 1.2
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 30 1.6
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 2.1
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 29 2.8
AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin prot... 29 3.7
AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin prot... 29 3.7
AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin prot... 29 3.7
AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium chann... 29 5.0
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 6.6
AF025468-5|AAB71042.1| 390|Caenorhabditis elegans Hypothetical ... 28 6.6
U28940-7|AAA68353.2| 294|Caenorhabditis elegans Mitochondrial p... 28 8.7
AL023841-1|CAA19511.1| 245|Caenorhabditis elegans Hypothetical ... 28 8.7
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
C08H9.2 protein.
Length = 1220
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 SIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG--DDSIVV 439
+I ++ +L + + +E+ +D R H RLIG RGKN++++M++Y+V+IR P+ G D ++VV
Sbjct: 1066 AIEEMISELRSMFTQEISLDARYHPRLIGQRGKNLKKVMEDYRVEIRLPRQGAEDPNLVV 1125
Query: 440 ITG-DEDNVLNAKEHLLNLAEEYL 508
+ G DE++V + +HL EE+L
Sbjct: 1126 VAGKDENDVYDCIDHLRAEEEEFL 1149
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
+V+ A +AL K+ E E + EDR L+ + + V +YH +IG+ G+ IT ++ +GV
Sbjct: 980 NVDQALEALRGKLGEYEAQAEDRKLKQWSMSINVPTDYHQKIIGQRGATITALKEKYGVI 1039
Query: 183 INLPKRGEPDDDIITIQGYEDKAH 254
IN+P+ E ++ ITIQGYE+KA+
Sbjct: 1040 INVPR--EDGNETITIQGYEEKAN 1061
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +3
Query: 39 IAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDD 218
++ + K+KE+ + E K PE+H +IGKGGS I K+R V++ PK G+ + +
Sbjct: 699 LSALAKDKEENYV---EDTVKAKPEFHRFLIGKGGSKIAKLRDTLNVRVMFPKEGDAEKE 755
Query: 219 IITIQGYEDKAHRLK 263
I + G ++ + K
Sbjct: 756 TIHLLGKKEDVPKAK 770
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP-KHGDDSI 433
A+++ I+ L Q E+DI H RLIG G +R + E I+ P + G S
Sbjct: 121 AEEARARIIRDLQTQASREIDIPKDHHGRLIGKEGALLRNLEAETNCRIQIPNRDGPSSK 180
Query: 434 VVITGDEDNVLNAKEHLLNLAEEYLKMS 517
+ ITG + + A H+L ++E K++
Sbjct: 181 ITITGPREGIQRAAAHILAVSEREAKLA 208
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +3
Query: 21 QALTEKIAEMEKEKEDRL--LRS-FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINL 191
Q EK E E+ + LRS F + +D YHP +IG+ G + K+ D+ V+I L
Sbjct: 1054 QGYEEKANECAAAIEEMISELRSMFTQEISLDARYHPRLIGQRGKNLKKVMEDYRVEIRL 1113
Query: 192 PKRGEPDDDIITIQGYED 245
P++G D +++ + G ++
Sbjct: 1114 PRQGAEDPNLVVVAGKDE 1131
Score = 48.0 bits (109), Expect = 8e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +3
Query: 93 KFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAHRLKT 266
K KV P H VIG+GGS+I+KI+ GVQI +P E + D I ++G ++ + T
Sbjct: 422 KVKVHPTLHRHVIGRGGSLISKIKDQHGVQITIPNE-ETNSDEIVVEGKKEGVKKAVT 478
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +2
Query: 293 DNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHG-DDSIVVITGDEDNVLN 469
+N Y++ V I + ++G G +IR++ DE + I P+ G DD + +TG + NV
Sbjct: 562 ENNYQQTVAIFKEFLKHIVGKGGASIRKLRDETETRIDLPESGSDDGKITVTGKQANVEK 621
Query: 470 A-------KEHLLNLAEEYLKMSQTVINR 535
A +E L N+AEE +++ Q V +R
Sbjct: 622 AVAQLNKIQEELANVAEESIEIPQKVQSR 650
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIV 436
AK++++A+V + + + +HR +IG G+ +R++M +Y V+I PK +
Sbjct: 918 AKEALLAMV-----PISKVIQLPVDMHRSIIGRGGETVRKLMQDYDVNISIPKDNSSEDI 972
Query: 437 VITGDEDNVLNAKEHLLNLAEEY 505
+TG +NV A E L EY
Sbjct: 973 TVTGQTENVDQALEALRGKLGEY 995
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSI- 433
AK+ I +V + Q + V I + HR L+ RG I + +Y V IRFP + ++
Sbjct: 842 AKNRIEDVVEDYEKQITDNVTIPAQFHRGLLAGRGAKIHELQSKYNVSIRFPNNREEGSE 901
Query: 434 ----VVITGDEDNVLNAKEHLL 487
V ++G + V AKE LL
Sbjct: 902 GSDQVTVSGRDTKVEEAKEALL 923
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +2
Query: 257 AKDSIMAIVHQLDNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEY-KVDIRFPKHGDDSI 433
A I AIV +++N+ ++ I R+H+ +IG +G ++ I D + V + FP S
Sbjct: 476 AVTEIRAIVTKIENEKSRDIIIPQRLHKLIIGSKGSGVQVIRDSHPNVSVVFPDAKSKSD 535
Query: 434 VV-ITGDEDNVLNAKEHLLNLAEEYLK--MSQTVINRRQHLLWVI 559
VV I GD+ V + L L++EY + QTV ++ L ++
Sbjct: 536 VVNIRGDKTEVDAVYKKLTALSKEYAENNYQQTVAIFKEFLKHIV 580
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 293 DNQYREEVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGD--DSIVVITGDEDNVL 466
+N + V P HR LIG G I ++ D V + FPK GD + + G +++V
Sbjct: 708 ENYVEDTVKAKPEFHRFLIGKGGSKIAKLRDTLNVRVMFPKEGDAEKETIHLLGKKEDVP 767
Query: 467 NAKEHLLNLAEEYLKMSQTV 526
AK L + ++ +S+TV
Sbjct: 768 KAKAALEDAIKQ---LSETV 784
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +3
Query: 24 ALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRG 203
A+ +K+ + KE + + FK E+ ++GKGG+ I K+R + +I+LP+ G
Sbjct: 548 AVYKKLTALSKEYAENNYQQTVAIFK---EFLKHIVGKGGASIRKLRDETETRIDLPESG 604
Query: 204 EPDDDIITIQG 236
DD IT+ G
Sbjct: 605 S-DDGKITVTG 614
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 111 EYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQ 233
+ H +IG+GG + K+ D+ V I++PK +D +T Q
Sbjct: 937 DMHRSIIGRGGETVRKLMQDYDVNISIPKDNSSEDITVTGQ 977
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +3
Query: 54 KEKEDRLLRSFELK----FKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDI 221
+E R++R + + + ++H +IGK G+++ + + +I +P R P
Sbjct: 122 EEARARIIRDLQTQASREIDIPKDHHGRLIGKEGALLRNLEAETNCRIQIPNRDGPSSK- 180
Query: 222 ITIQGYEDKAHR 257
ITI G + R
Sbjct: 181 ITITGPREGIQR 192
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +2
Query: 350 GLRGKNIRRIMDEYKVDIRFPK-HGDDSIVVITGDEDNVLNAKEHLLNLAEEYLKMS--Q 520
G + + R+ V I P H + ++ +TG++D VL + + E +S Q
Sbjct: 224 GPKNETYDRLTQNNGVKINIPPPHVTNEVISVTGEKDGVLRVAAEIRQIIESKKNVSSIQ 283
Query: 521 TVINRRQH 544
+ R QH
Sbjct: 284 VAVARTQH 291
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAH 254
+IG+GG I +IR + G QI L + + IITI+G E + H
Sbjct: 314 IIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIH 356
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 344 LIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLLNLAEE 502
+IG G+NI+R+ E+ ++ P + + + +T DE VLN + +L E+
Sbjct: 47 IIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLED 100
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 84 FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
FE++ V + +IGKGG I ++R +F + +P P+
Sbjct: 33 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPE 75
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQGYEDKAH 254
+IG+GG I +IR + G QI L + + IITI+G E + H
Sbjct: 331 IIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIH 373
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 344 LIGLRGKNIRRIMDEYKVDIRFP-KHGDDSIVVITGDEDNVLNAKEHLLNLAEE 502
+IG G+NI+R+ E+ ++ P + + + +T DE VLN + +L E+
Sbjct: 64 IIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLED 117
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 84 FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
FE++ V + +IGKGG I ++R +F + +P P+
Sbjct: 50 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPE 92
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.075
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 308 EEVDIDPRVH-RRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNAKEHL 484
E V++ H ++G +G I+ + + I+ P G+D I V+TG ++V AK +
Sbjct: 49 ESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREI 108
Query: 485 LNLAEEYLKM 514
AE + ++
Sbjct: 109 DCAAEHFTQI 118
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.075
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 308 EEVDIDPRVH-RRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNAKEHL 484
E V++ H ++G +G I+ + + I+ P G+D I V+TG ++V AK +
Sbjct: 49 ESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREI 108
Query: 485 LNLAEEYLKM 514
AE + ++
Sbjct: 109 DCAAEHFTQI 118
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 34.7 bits (76), Expect = 0.075
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 308 EEVDIDPRVH-RRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNAKEHL 484
E V++ H ++G +G I+ + + I+ P G+D I V+TG ++V AK +
Sbjct: 80 ESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREI 139
Query: 485 LNLAEEYLKM 514
AE + ++
Sbjct: 140 DCAAEHFTQI 149
>U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical
protein F26B1.2e protein.
Length = 93
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 84 FELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPD 212
FE++ V + +IGKGG I ++R +F + +P P+
Sbjct: 50 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPE 92
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Frame = +3
Query: 72 LLRSFELKFKVDPEYHPLVIGKGGSVI------TKIRTDFGVQINLPKRGEP----DDDI 221
+L+ + ++ V+ +YH ++IG GS I T+ R DF +NL K+ +D I
Sbjct: 183 MLKDWPIRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDF---VNLSKKERTVLGNNDRI 239
Query: 222 ITIQGYEDKA 251
+T+ G ++A
Sbjct: 240 LTVHGVAEQA 249
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Frame = +3
Query: 72 LLRSFELKFKVDPEYHPLVIGKGGSVI------TKIRTDFGVQINLPKRGEP----DDDI 221
+L+ + ++ V+ +YH ++IG GS I T+ R DF +NL K+ +D I
Sbjct: 307 MLKDWPIRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDF---VNLSKKERTVLGNNDRI 363
Query: 222 ITIQGYEDKA 251
+T+ G ++A
Sbjct: 364 LTVHGVAEQA 373
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINLPKRGEP--DDDIITIQGYEDKAHR 257
++IGKGG +I ++ + G +I P +D I I G D+ +R
Sbjct: 206 MIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYR 252
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINLPKRGEP--DDDIITIQGYEDKAHR 257
++IGKGG +I ++ + G +I P +D I I G D+ +R
Sbjct: 253 MIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYR 299
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 31.5 bits (68), Expect = 0.70
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +3
Query: 6 VENAKQALTEKIAEM---EKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFG 176
+E+ + + EK A+ + R E+K + +VIGK G+ I IR FG
Sbjct: 105 IESIQDKIREKCADQGGSDAFDHKNTSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQFG 164
Query: 177 VQINL-PKRG 203
QI + PK G
Sbjct: 165 CQIQVYPKAG 174
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINLPK--RGEPDDDIITIQG 236
LVIGKGG I +I ++ G L + G D+ + I+G
Sbjct: 290 LVIGKGGETIKQINSESGAHCELSRDPTGNADEKVFVIKG 329
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 93 KFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDI--ITIQGYEDKAHRLK 263
K+ + +VIG+GGS I I+ G ++ + +P + +T++G K
Sbjct: 10 KYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAK 68
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINLPK--RGEPDDDIITIQG 236
LVIGKGG I +I ++ G L + G D+ + I+G
Sbjct: 353 LVIGKGGETIKQINSESGAHCELSRDPTGNADEKVFVIKG 392
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 93 KFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDI--ITIQGYEDKAHRLK 263
K+ + +VIG+GGS I I+ G ++ + +P + +T++G K
Sbjct: 73 KYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAK 131
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 123 LVIGKGGSVITKIRTDFGVQINLPK--RGEPDDDIITIQG 236
LVIGKGG I +I ++ G L + G D+ + I+G
Sbjct: 331 LVIGKGGETIKQINSESGAHCELSRDPTGNADEKVFVIKG 370
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 93 KFKVDPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDI--ITIQGYEDKAHRLK 263
K+ + +VIG+GGS I I+ G ++ + +P + +T++G K
Sbjct: 51 KYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAK 109
>Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical
protein M7.3 protein.
Length = 712
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 311 EVDIDPRVHRRLIGLRGKNIRRIMDEYKVDIRFP---KHGDDS---IVVITGDEDNVLNA 472
++++ +H +IG G+ I+++M I FP K+ D + V I+G NV A
Sbjct: 107 KMELHHSLHSHIIGKGGRGIQKVMKMTSCHIHFPDSNKYSDSNKSDQVSISGTPVNVFEA 166
Query: 473 KEHLLNL 493
+HL ++
Sbjct: 167 LKHLRSM 173
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +3
Query: 3 SVENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQ 182
S+E + A T + ++ +KE LK ++ H +IGKGG I K+
Sbjct: 82 SIEQIESARTLVLNSLQIKKE-----RVSLKMELHHSLHSHIIGKGGRGIQKVMKMTSCH 136
Query: 183 INLPKRGEPDD 215
I+ P + D
Sbjct: 137 IHFPDSNKYSD 147
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 126 VIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITIQG 236
+IGK G I KIR + G +IN+ G + I+TI G
Sbjct: 86 IIGKKGDQIKKIREESGAKINI-SDGSCPERIVTITG 121
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 532 PPAAPSLGDFGAVLGAENPNA-PAGPGFVVKGGPWEQRAPDTASTHEFPTMPG 687
PP P+ G F G + P + P+GP + +G + P AS P MPG
Sbjct: 233 PPGQPTAGSFPP--GPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPG 283
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 553 GDFGAVLGAENPNAPAGPGFVVKGGPWEQRAPDTASTHEFPTMPG 687
G +G+ G P+ P+GP GGP + P + PT+PG
Sbjct: 73 GGYGS--GPSGPSGPSGPHGGFPGGP-QGHFPGNTGSSNTPTLPG 114
>AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin
protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 430 TVISMFRESNVNFVFVHNSPYIFTSQTNQSSVDTWVDVHF-LSVLIIQLMHYCHYGVFSL 254
T+ F +++ F+ H S F + N + + S+ ++ ++HY H+ F
Sbjct: 81 TITRAFIAAHIPFLNSHTSAVAFLDRNNLKKQLKKITLSDGASIPMLPIVHYPHFHKFHQ 140
Query: 253 *ALSSYP*IVMISSSGSPRLGKL 185
S+YP +V + + G +GK+
Sbjct: 141 SQSSTYPMVVSV-NEGFQGIGKI 162
>AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin protein
1, isoform a protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 430 TVISMFRESNVNFVFVHNSPYIFTSQTNQSSVDTWVDVHF-LSVLIIQLMHYCHYGVFSL 254
T+ F +++ F+ H S F + N + + S+ ++ ++HY H+ F
Sbjct: 81 TITRAFIAAHIPFLNSHTSAVAFLDRNNLKKQLKKITLSDGASIPMLPIVHYPHFHKFHQ 140
Query: 253 *ALSSYP*IVMISSSGSPRLGKL 185
S+YP +V + + G +GK+
Sbjct: 141 SQSSTYPMVVSV-NEGFQGIGKI 162
>AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin protein
1, isoform b protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 430 TVISMFRESNVNFVFVHNSPYIFTSQTNQSSVDTWVDVHF-LSVLIIQLMHYCHYGVFSL 254
T+ F +++ F+ H S F + N + + S+ ++ ++HY H+ F
Sbjct: 154 TITRAFIAAHIPFLNSHTSAVAFLDRNNLKKQLKKITLSDGASIPMLPIVHYPHFHKFHQ 213
Query: 253 *ALSSYP*IVMISSSGSPRLGKL 185
S+YP +V + + G +GK+
Sbjct: 214 SQSSTYPMVVSV-NEGFQGIGKI 235
>AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium channel,
beta subunit protein1 protein.
Length = 526
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 326 PRVHRRLIGLRGKNIRRIMDEYKVDIRFPKHGDDSIVVITGDEDNVLNAKEHLLNLAEEY 505
P+V +RLI RGK+ R M+ V + + DE+ + +A EHL + E Y
Sbjct: 321 PKVLQRLIKSRGKSQSRNMNVQMVAAEKLAQCQAELFDVLLDENQLEDACEHLADFMEAY 380
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 27 LTEKIAEMEKEKEDRLLRSFELKFKVDPEYH 119
++ +IA+ EKE+ +R+ EL V P YH
Sbjct: 182 ISARIAKFFAEKEENHIRTRELSLSVHPVYH 212
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPE 113
+EN K L E+I EME + E+ L + +L +D E
Sbjct: 833 LENEKLKLEEEIQEMEIKNEEALKENLKLSMLLDRE 868
>AF025468-5|AAB71042.1| 390|Caenorhabditis elegans Hypothetical
protein T27A1.4 protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 335 HRRLIGLRGKNIRRIMDEYKVDIRFP--KHGDDS-IVVIT 445
H R +G G+ + RI+ EY R P H D+S I+VIT
Sbjct: 23 HSRRLGTEGQIVGRILSEYDSSSRPPVRDHADNSAILVIT 62
>U28940-7|AAA68353.2| 294|Caenorhabditis elegans Mitochondrial
prohibitin complexprotein 2 protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 6 VENAKQALTEKIAEMEKEKEDRLLRSFELKFKVDPEYHPLVIGKGGSVITKIRTDFGVQI 185
VE AKQ EKI + E E E L + K DP + L + I +I ++ G +
Sbjct: 213 VERAKQQKQEKIVQAEGEAESAKLLGEAM--KNDPGFLKLRKIRAAQKIARIVSESGNKT 270
Query: 186 NLPKRG 203
LP G
Sbjct: 271 YLPTGG 276
>AL023841-1|CAA19511.1| 245|Caenorhabditis elegans Hypothetical
protein Y43C5B.2 protein.
Length = 245
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 105 DPEYHPLVIGKGGSVITKIRTDFGVQINLPKRGEPDDDIITI 230
+P YH + + + K DF ++I+ P+ G P +I+++
Sbjct: 16 EPYYHGFLPREDVKTVLKNNGDFVIRISEPQAGSPRSNILSV 57
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 344 LIGLRGKNIRRIMDEYKVDIRFPKHGDDSIV 436
++GL+GKNI+++ DE I+F D ++
Sbjct: 260 IMGLQGKNIKKLSDETGTKIQFLPDDDPKLM 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,223,810
Number of Sequences: 27780
Number of extensions: 423757
Number of successful extensions: 1811
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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