Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0720.Seq
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    27   0.21 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    26   0.37 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   6.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   7.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 710 NISCRYNVPYITKKKVLYQYYYRMY*IHNVFRRAP 606
           N++C+  VPY+      Y+Y YR Y ++N +   P
Sbjct: 243 NLTCQPAVPYVP----FYRYCYRPYPVYNQWWSGP 273


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
 Frame = -1

Query: 612 CALPVSRSHPSNVSIVELTSRTFYPKL---------NN*KRRPGPAEYVR--TLQLVYKY 466
           C++  + S P    I + T+ TFYP +          N  RR G   Y R  TL+L  ++
Sbjct: 183 CSINSTSSQPVGTQIHQQTNHTFYPWMAIADSMTFGANGLRRRGRQTYTRYQTLELEKEF 242

Query: 465 STTIYIATK 439
            T  Y+  +
Sbjct: 243 HTNHYLTRR 251


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 178 GFVSTLAWIALFLIVTLTI 234
           G+  T   + LFLI+TLTI
Sbjct: 285 GYTVTFLCLYLFLIITLTI 303


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 332 NHTVHKLTPHRVTQPS 285
           NH + K+ P R+TQ S
Sbjct: 769 NHEIKKVIPGRITQKS 784


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/27 (29%), Positives = 9/27 (33%)
 Frame = +2

Query: 98  CPSPWPRTRCGPS*RGAGPSRTRTCTW 178
           C  PW    C    +   P  T  C W
Sbjct: 75  CDYPWRSNYCDNKQQANPPISTEHCDW 101


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 587 CERLTGRAHDETRC 628
           CERL G   DE++C
Sbjct: 95  CERLYGIFADESKC 108


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 587 CERLTGRAHDETRC 628
           CERL G   DE++C
Sbjct: 95  CERLYGIFADESKC 108


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 685 LILQKKKSFTSIIIVCIKS 629
           LI+  KKS   I+ +CI+S
Sbjct: 501 LIVDGKKSEEQIVDICIRS 519


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 501 EYVRTLQLVYKYSTTIYIAT 442
           +YV  LQLV+ +   IY+ T
Sbjct: 136 DYVSLLQLVFVFCYFIYLFT 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,763
Number of Sequences: 336
Number of extensions: 3654
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)