Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0720.Seq
(747 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34070-1|AAC50235.1| 358|Homo sapiens CCAAT/enhancer binding pr... 33 0.82
EU048234-1|ABS82765.1| 358|Homo sapiens CCAAT/enhancer binding ... 33 1.1
BC063874-1|AAH63874.1| 141|Homo sapiens CEBPA protein protein. 33 1.1
AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant... 32 2.5
X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein. 31 3.3
EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted i... 31 3.3
AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted i... 31 3.3
AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted i... 31 3.3
BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein. 31 5.8
BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein. 31 5.8
AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear fact... 31 5.8
AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open read... 30 7.7
AK056792-1|BAB71286.1| 593|Homo sapiens protein ( Homo sapiens ... 30 7.7
>U34070-1|AAC50235.1| 358|Homo sapiens CCAAT/enhancer binding
protein alpha protein.
Length = 358
Score = 33.5 bits (73), Expect = 0.82
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 90 PLPAPHPGHEL-AAVHPDAGLALHGLGRVH-GLRVDVGLDRALPHRNPHDPEIQTELMRN 263
P+P+PHP L AA P G AL GLG H LR G ++ + + R
Sbjct: 231 PVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGTGAGKAKKSVDKNSNEYRVRRE 290
Query: 264 PGRIALR 284
IA+R
Sbjct: 291 RNNIAVR 297
>EU048234-1|ABS82765.1| 358|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), alpha protein.
Length = 358
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 90 PLPAPHPGHEL-AAVHPDAGLALHGLGRVH-GLRVDVGLDRALPHRNPHDPEIQTELMRN 263
P+P+PHP L AA P G AL GLG H LR G ++ + + R
Sbjct: 231 PVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRE 290
Query: 264 PGRIALR 284
IA+R
Sbjct: 291 RNNIAVR 297
>BC063874-1|AAH63874.1| 141|Homo sapiens CEBPA protein protein.
Length = 141
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 90 PLPAPHPGHEL-AAVHPDAGLALHGLGRVH-GLRVDVGLDRALPHRNPHDPEIQTELMRN 263
P+P+PHP L AA P G AL GLG H LR G ++ + + R
Sbjct: 14 PVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRE 73
Query: 264 PGRIALR 284
IA+R
Sbjct: 74 RNNIAVR 80
>AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant
protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 75 PALRVPLPAPHPGHELAAVHPDAGLALHGLGRVHGLRVDVGLDRALPHRNP 227
PA PL PG ++ +G G G VHG + +G R L H P
Sbjct: 68 PAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPMGYRRPLAHAKP 118
>X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein.
Length = 1319
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 81 LRVPLPAPHPGHELAAVHPDA--GLALHGLGRVHGLRVDVGLDRALPHRNPHDPEIQTEL 254
L+ P+ P GH A P G +L GLG++ VGL A R P P+ T
Sbjct: 679 LQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSA 738
Query: 255 M 257
+
Sbjct: 739 L 739
>EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1322
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 81 LRVPLPAPHPGHELAAVHPDA--GLALHGLGRVHGLRVDVGLDRALPHRNPHDPEIQTEL 254
L+ P+ P GH A P G +L GLG++ VGL A R P P+ T
Sbjct: 682 LQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSA 741
Query: 255 M 257
+
Sbjct: 742 L 742
>AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1320
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 81 LRVPLPAPHPGHELAAVHPDA--GLALHGLGRVHGLRVDVGLDRALPHRNPHDPEIQTEL 254
L+ P+ P GH A P G +L GLG++ VGL A R P P+ T
Sbjct: 680 LQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSA 739
Query: 255 M 257
+
Sbjct: 740 L 740
>AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1320
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 81 LRVPLPAPHPGHELAAVHPDA--GLALHGLGRVHGLRVDVGLDRALPHRNPHDPEIQTEL 254
L+ P+ P GH A P G +L GLG++ VGL A R P P+ T
Sbjct: 680 LQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSA 739
Query: 255 M 257
+
Sbjct: 740 L 740
>BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 75 PALRVPLPAPHPGHELAAVHPDAGLALHGLGRVHGLRVDVGLDRALPHRNP 227
PA PL PG ++ +G G G VHG + G R L H P
Sbjct: 68 PAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKP 118
>BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 75 PALRVPLPAPHPGHELAAVHPDAGLALHGLGRVHGLRVDVGLDRALPHRNP 227
PA PL PG ++ +G G G VHG + G R L H P
Sbjct: 68 PAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKP 118
>AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear
factor-3 gamma protein.
Length = 350
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 75 PALRVPLPAPHPGHELAAVHPDAGLALHGLGRVHGLRVDVGLDRALPHRNP 227
PA PL PG ++ +G G G VHG + G R L H P
Sbjct: 68 PAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKP 118
>AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open reading
frame 175 protein.
Length = 946
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/76 (22%), Positives = 27/76 (35%)
Frame = -1
Query: 315 ANTSPRHTTESVARSVQDFALIPFEFQDREGYDEEERDPGQXXXXXXXXXXXXEGPAPRQ 136
++ PR T S + S D +P F +EE R+ GP Q
Sbjct: 407 SSEDPRDTETSTSASTSDVGFLPLTFGPHASIEEEAREDPLPPGLLPEMAHLSGGPFAEQ 466
Query: 135 DGPQRVRGQGEGQAEG 88
G + + G+ +G
Sbjct: 467 PGWRNLGGESPSLPQG 482
>AK056792-1|BAB71286.1| 593|Homo sapiens protein ( Homo sapiens
cDNA FLJ32230 fis, clone PLACE6004464, weakly similar to
Human placenta (Diff48) mRNA. ).
Length = 593
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/76 (22%), Positives = 27/76 (35%)
Frame = -1
Query: 315 ANTSPRHTTESVARSVQDFALIPFEFQDREGYDEEERDPGQXXXXXXXXXXXXEGPAPRQ 136
++ PR T S + S D +P F +EE R+ GP Q
Sbjct: 407 SSEDPRDTETSTSASTSDVGFLPLTFGPHASIEEEAREDPLPPGLLPEMAHLSGGPFAEQ 466
Query: 135 DGPQRVRGQGEGQAEG 88
G + + G+ +G
Sbjct: 467 PGWRNLGGESPSLPQG 482
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,367,194
Number of Sequences: 237096
Number of extensions: 2502441
Number of successful extensions: 5306
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5305
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -