Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0718.Seq
(577 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 38 0.004
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 37 0.010
11_06_0690 + 26303733-26306540 36 0.023
09_06_0087 + 20771329-20771450,20771462-20771771,20771893-207726... 35 0.040
06_03_0046 - 15852653-15854560 34 0.071
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 34 0.093
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 34 0.093
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980... 33 0.12
11_02_0147 - 8791117-8792502 33 0.16
09_02_0546 - 10454404-10455687 33 0.16
04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600 33 0.22
10_08_1032 - 22432739-22433218,22433231-22433848 32 0.28
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 32 0.28
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 32 0.28
03_06_0587 - 34921535-34922041,34922579-34922689 31 0.50
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 31 0.87
01_05_0417 - 21961780-21962157 31 0.87
10_02_0188 - 6473353-6473432,6473619-6474816 30 1.1
04_04_1437 + 33600282-33601562 30 1.1
06_01_0031 - 305457-305663,306248-306523,306824-307609 30 1.5
03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662... 30 1.5
08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150 29 2.0
03_06_0481 - 34222012-34222287,34222371-34222439 29 2.0
03_02_0915 + 12360079-12360095,12360225-12361353 29 2.0
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315... 29 2.7
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 29 3.5
05_05_0392 + 24629528-24630442 29 3.5
12_02_0177 + 14938920-14940314 28 4.6
12_02_0176 + 14933044-14934438 28 4.6
04_03_0114 + 11417041-11417188,11418325-11418399,11421007-114211... 28 4.6
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 4.6
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 28 6.1
08_01_0202 - 1638978-1639571 28 6.1
08_02_0181 + 13923658-13923661,13925518-13925681,13925879-139259... 27 8.1
05_06_0094 + 25477367-25477398,25477516-25477891,25478292-254783... 27 8.1
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 27 8.1
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 27 8.1
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 38.3 bits (85), Expect = 0.004
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +1
Query: 238 RRGPLQRGTPGQ--CHRCQLYGHSARNCNARPRCVKCLE-DHATTDCSRVKETATEPPSC 408
R G R P CH C L GH A C+++ C C E H C C
Sbjct: 46 RPGHFARDCPNVALCHACGLPGHIAAECSSKDLCWNCKEPGHMANSC-------PNEGIC 98
Query: 409 VLCCKQGHTANYRGCSKAPRKLP 477
C K GH A R CS AP LP
Sbjct: 99 RNCGKSGHIA--RECS-APPMLP 118
Score = 34.3 bits (75), Expect = 0.071
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKC-LEDHATTDCSR---VKETATEPP 402
C+ C+ GH ARNC P C C + H +C + + E PP
Sbjct: 143 CNNCRKSGHLARNCPNEPVCNLCNVSGHLARECPKSDAINERGGPPP 189
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLED-HATTDCSRVKETATEPPSCVLCCKQGHTA---- 438
C C+ GH A +C C C + H +CS E C C K GH A
Sbjct: 79 CWNCKEPGHMANSCPNEGICRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECT 138
Query: 439 NYRGCSKAPRK--LPANAP 489
N + C+ + L N P
Sbjct: 139 NEKACNNCRKSGHLARNCP 157
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = +1
Query: 274 CHRCQLYGHSARNC------NARPRCVKCLED-HATTDCSR-VKETATEPPSCVLCCKQG 429
C C+ GHS +NC N + C C E H+ + C + ++ T+ SC +C +QG
Sbjct: 97 CLLCRQRGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQG 156
Query: 430 H 432
H
Sbjct: 157 H 157
>11_06_0690 + 26303733-26306540
Length = 935
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 238 RRGPLQRGTPGQCHRCQLYGHSARNCNARPRCVKC-LEDHATTDCSRVKETATEP 399
R P+ R G+C C GH +C PRC +C + DC + ++ P
Sbjct: 82 RARPIPRWLQGRCFCCLGLGHLKADCKGAPRCYRCWFSGYLERDCKFDRGPSSRP 136
>09_06_0087 +
20771329-20771450,20771462-20771771,20771893-20772672,
20772854-20774002
Length = 786
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSARNCNARPRCVKC-LEDHATTDCSRVKETATEP 399
P+ R G+C RC GH +C+ P C +C H +C +V AT P
Sbjct: 62 PIPRWLHGRCFRCLGLGHLKASCSQPPTCYRCWYPGHIERNC-KVDIDATLP 112
Score = 33.9 bits (74), Expect = 0.093
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 328 RCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC-----SKAPRKLPANAPP 492
RC +CL +K + ++PP+C C GH R C + PRK+PA A P
Sbjct: 70 RCFRCL------GLGHLKASCSQPPTCYRCWYPGHIE--RNCKVDIDATLPRKVPAAAAP 121
Query: 493 K 495
K
Sbjct: 122 K 122
>06_03_0046 - 15852653-15854560
Length = 635
Score = 34.3 bits (75), Expect = 0.071
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 301 SARNCNAR--PRCVKCLED-HATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSKAPRK 471
SARN N+ C +CL+ H +DCS EP C C + GH A + A
Sbjct: 217 SARNLNSNFMLSCTRCLDKGHIASDCS-------EPVWCHSCLEAGHMARFCATRPAKAH 269
Query: 472 LPANAPPKTS 501
P PK S
Sbjct: 270 QPVGKFPKLS 279
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLE-DHATTDCSRVKETATEP 399
C RC GH A +C+ C CLE H C+ A +P
Sbjct: 229 CTRCLDKGHIASDCSEPVWCHSCLEAGHMARFCATRPAKAHQP 271
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARP 327
P CH C GH AR C RP
Sbjct: 245 PVWCHSCLEAGHMARFCATRP 265
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 33.9 bits (74), Expect = 0.093
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARP----RCVKCLE-DHATTDCSRVKETATEPPSCVLCCKQGHT 435
+C++C+ GH AR+C + C KC + H + DC V+ T C C + GH
Sbjct: 925 ECYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCP-VQSTGGS--ECFKCKQPGHF 981
Query: 436 A 438
A
Sbjct: 982 A 982
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = +1
Query: 187 GKKIASCLRTVWPIGGHRRGPLQRGTPG-QCHRCQLYGHSARNCNAR----PRCVKCLE- 348
G + C + P G + R + T G +C +C+ GH +R+C + C KC +
Sbjct: 920 GNGSSECYKCKQP-GHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQP 978
Query: 349 DHATTDC 369
H DC
Sbjct: 979 GHFARDC 985
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 33.9 bits (74), Expect = 0.093
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLE-DHATTDCSRVKETATEP 399
C RC GH A NC+ RC CLE H + C+ A +P
Sbjct: 230 CVRCLDKGHIASNCSGPVRCHSCLEAGHMSCFCATRPTKAHQP 272
Score = 31.1 bits (67), Expect = 0.66
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +1
Query: 310 NCNARPRCVKCLE-DHATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSKAPRKL--PA 480
N N P CV+CL+ H ++CS P C C + GH + + C+ P K P
Sbjct: 223 NSNFLPSCVRCLDKGHIASNCS-------GPVRCHSCLEAGHMSCF--CATRPTKAHQPV 273
Query: 481 NAPPKTS 501
PK S
Sbjct: 274 GKFPKLS 280
>05_03_0201 -
9762563-9762843,9763037-9763919,9763988-9764036,
9806710-9807680
Length = 727
Score = 33.5 bits (73), Expect = 0.12
Identities = 24/77 (31%), Positives = 29/77 (37%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC 453
C RC GH A +C CV C EDH + C T +C C H
Sbjct: 193 CSRCGEIGHVASSCATT--CVHCEEDHPSDRC------PTSRITCFFCEGTDHVPKDCQF 244
Query: 454 SKAPRKLPANAPPKTSG 504
S K AN P ++G
Sbjct: 245 SFLLTKKMANQPASSNG 261
>11_02_0147 - 8791117-8792502
Length = 461
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRC-VKCLEDHATTDCSRVKETATEPPSCVLCC 420
C +C+ Y H +R+C C + E H T DC +++ +P + V+ C
Sbjct: 119 CSKCRSYSHLSRDCKLSVFCIIFAKETHRTEDC--IRKNQKKPVAKVVGC 166
>09_02_0546 - 10454404-10455687
Length = 427
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/77 (31%), Positives = 29/77 (37%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC 453
C RC GH A +C + CV C EDH C T +C C H
Sbjct: 203 CSRCGEIGHVASSCAS--TCVHCEEDHPPDRC------PTSRITCFFCEGTDHVPKDCQF 254
Query: 454 SKAPRKLPANAPPKTSG 504
S K AN P ++G
Sbjct: 255 SFLLTKKMANQPASSNG 271
>04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600
Length = 585
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKC-LEDHATTDC----SRVKETA 390
C RC GH ++C+++ C C EDH T C S VK TA
Sbjct: 274 CFRCLTKGHIMQDCSSKFYCEICESEDHIATRCPIFRSNVKPTA 317
>10_08_1032 - 22432739-22433218,22433231-22433848
Length = 365
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 244 GPLQRGTPGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSR---VKETATEPP 402
G Q+G G C+ C H ARNCN P ++ +D VK T T+ P
Sbjct: 262 GGSQQGGEG-CYHCGSKKHWARNCNTEPHLIEMYQDWKKKQGPENHFVKVTGTDTP 316
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 232 GHRRGPLQRGTP---GQCHRCQLYGHSARNCNA---RPRCVKCLE-DHATTDC 369
G R + RG P G+C C + GH AR+C A + +C +C E H +C
Sbjct: 87 GGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 139
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 226 IGGHRRGPLQRGT-PGQCHRCQLYGHSARNCNARPR 330
I GH + G +C+RC GH RNC PR
Sbjct: 109 IDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPR 144
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 232 GHRRGPLQRGTP---GQCHRCQLYGHSARNCNA---RPRCVKCLE-DHATTDC 369
G R + RG P G+C C + GH AR+C A + +C +C E H +C
Sbjct: 134 GGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 186
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 226 IGGHRRGPLQRGT-PGQCHRCQLYGHSARNCNARPR 330
I GH + G +C+RC GH RNC PR
Sbjct: 156 IDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPR 191
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 229 GGHRRGPLQRGTPGQCHRCQLYGHSARNC 315
GG R P G G C++C GH AR C
Sbjct: 113 GGGGRAPRGSGGGGDCYKCGKPGHFAREC 141
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 397 PPSCVLCCKQGHTANYR-GCSKAPRKLPANAPP 492
P C CC GH + C KAP PA APP
Sbjct: 263 PSDC--CCHHGHGGCHCCSCGKAPEPAPAPAPP 293
>01_05_0417 - 21961780-21962157
Length = 125
Score = 30.7 bits (66), Expect = 0.87
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 391 TEPPSCVLCCKQGHTANYRGCSKAPRKLPANAPPK 495
T PP C C QG + GC AP PA+ P +
Sbjct: 5 TPPPPCAACAHQGRPSCPAGCPLAP-YFPADRPER 38
>10_02_0188 - 6473353-6473432,6473619-6474816
Length = 425
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC 453
C RC GH A +C CV C EDH C T +C C H
Sbjct: 193 CSRCGEIGHVASSC--ATICVHCEEDHPPDRC------PTSRITCFFCEGTDHVPKDCQF 244
Query: 454 SKAPRKLPANAPPKTSG 504
S K N P ++G
Sbjct: 245 SFLLTKKMVNQPASSNG 261
>04_04_1437 + 33600282-33601562
Length = 426
Score = 30.3 bits (65), Expect = 1.1
Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 4/161 (2%)
Frame = +3
Query: 9 GGA*TPRRNTRSPQRARRRANQK*PGRSVLPRHKRAPDAQRSR*IRV*YGARSTRSHTGG 188
GGA P T S +R + + L +H+R + I++ + H+
Sbjct: 183 GGAAVPENGTLSSSDLKRSVHFQHESAEPLAKHQRVEQSPTGNIIKLRRSMSNVSDHSAE 242
Query: 189 QENCLMSPHRVAYRGSP*RPPTTRHSRAVPPLPVIWPXXXXXXXXXXXXEMFRRSRDHRL 368
N SP R A G P + +R +PP P+I E+ HR
Sbjct: 243 ASN---SPVR-APLGIPFCSASVGGARKLPP-PLISAGEDHCTSCCEHRELLNTEALHRR 297
Query: 369 LARERDSYGAA----ELCTLLQAGTHGQLPWMLQGSTEAPG 479
+ + +S G A + LL G L +++ S E G
Sbjct: 298 MEKTAESLGLAGVTLDCADLLNNGLDKYLKNLIRSSVELIG 338
>06_01_0031 - 305457-305663,306248-306523,306824-307609
Length = 422
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 567 RRWAPEPVRKPVSARGAPKSWARGFRGRVCRELPWS 460
R+W E K SA WA +G+ C E PWS
Sbjct: 142 RKWKWEAKAKTASAAATKLKWATHLKGKGCLE-PWS 176
>03_05_0705 -
26965352-26965542,26965732-26965763,26966141-26966235,
26966737-26966810,26966894-26967029,26967137-26967200,
26967285-26967350,26967445-26967587,26969314-26969407,
26969779-26969902,26970016-26970193,26970273-26970395,
26970884-26970955,26971032-26971139,26972511-26972627,
26972757-26972889,26973209-26973299,26974642-26974722,
26975342-26975421,26975500-26975705,26977417-26977893
Length = 894
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 214 CGDMRQFSCPPVWLLVLRAPYHTRIYRDRCASGARL*RGRTDLPG 80
C + + PPV +V++ +HTR++ + + ++ R R LPG
Sbjct: 721 CASIEEGYLPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPG 765
>08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150
Length = 383
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNAR 324
P +C +C +GH+AR C AR
Sbjct: 19 PRRCSQCGHHGHNARTCTAR 38
>03_06_0481 - 34222012-34222287,34222371-34222439
Length = 114
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Frame = +1
Query: 289 LYGHSARNCNARPRCVKC-LEDHATTDC------SRVKETATEPPSCVLCCKQGHTANYR 447
L GH AR C P C C + H +C S ++ +C LC K GH + R
Sbjct: 23 LPGHIARECTNEPVCNLCNVSGHLARNCQKTTISSEIQGGPFRDITCRLCGKPGHIS--R 80
Query: 448 GC 453
C
Sbjct: 81 NC 82
>03_02_0915 + 12360079-12360095,12360225-12361353
Length = 381
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQ--CHRCQLYGHSARNC--NARPR 330
GHR R P CHRC++ GH ++C N PR
Sbjct: 106 GHRGAHAGRAPPAGYVCHRCRVPGHFIQHCPTNGDPR 142
>01_01_0419 -
3146851-3147339,3148428-3148663,3148847-3149793,
3150258-3150356,3151128-3151501
Length = 714
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARPRCVKCLEDHATTD 366
+CHRC +GH A C+ + K + A D
Sbjct: 675 ECHRCGKFGHFADECDEPRKMTKAVVQLAIAD 706
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 292 YGHSARNCNARPRCVKC-LEDHATTDCSRVKETATEPPSCVL 414
+ S RN N + C KC DH DC + E + PS VL
Sbjct: 325 FRQSKRNAN-KDGCFKCGAPDHIAKDCDQGTEQKNKGPSYVL 365
>05_05_0392 + 24629528-24630442
Length = 304
Score = 28.7 bits (61), Expect = 3.5
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Frame = +3
Query: 6 PGGA*TPRRNTRSPQRARRRANQK*PGRSVLPRHKRAPDAQRSR*IR-V*YGARS--TRS 176
PGG R + P RR ++ RS P KR PD +R+ GA S R
Sbjct: 166 PGGG---RASPSPPPPPRREPGERPTRRSPSPATKRPPDQRRTAASAGAAAGAASGPQRK 222
Query: 177 HTGGQENC-LMSPHRVAYRGSP*RPPTTRHSRAVPP 281
C SP R SP TT SR PP
Sbjct: 223 PPVPPRPCGRASPRRAQETNSPASSTTTTQSRGPPP 258
>12_02_0177 + 14938920-14940314
Length = 464
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 136 DKFAYDMVLVALEATPEGKKIASCLRTVW 222
D F D VL+ TPEGKK L+ V+
Sbjct: 151 DLFKPDRVLIGGRETPEGKKAVQALKEVY 179
>12_02_0176 + 14933044-14934438
Length = 464
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 136 DKFAYDMVLVALEATPEGKKIASCLRTVW 222
D F D VL+ TPEGKK L+ V+
Sbjct: 151 DLFKPDRVLIGGRETPEGKKAVQALKEVY 179
>04_03_0114 +
11417041-11417188,11418325-11418399,11421007-11421107,
11422049-11422120,11422239-11422757,11422949-11423149
Length = 371
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 235 HRRGPLQRGTPG-QCHRCQLYGHSARNC 315
H G L+ G +C++C +GH RNC
Sbjct: 230 HEAGVLKSKEKGARCYKCHEFGHIRRNC 257
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +1
Query: 232 GHRRGPLQRGTP---GQCHRCQLYGHSARNCNA 321
G R + RG P G+C C + GH AR+C A
Sbjct: 94 GGSREYMGRGPPPGSGRCFNCGIDGHWARDCKA 126
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/49 (26%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +1
Query: 256 RGTPGQCHRCQLYGHSARNCNARPRCVKC-LEDHATTDCSRVKETATEP 399
R G C C GH C RC C H +C + +P
Sbjct: 126 RWLQGCCFNCLGLGHQKSACPGSTRCYNCWYSGHIARNCPTSRAARAQP 174
>08_01_0202 - 1638978-1639571
Length = 197
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 229 GGHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
GG RG G G C+ C GH AR C ++
Sbjct: 164 GGGYRGGGGGGGGGGCYNCGETGHIARECPSK 195
>08_02_0181 +
13923658-13923661,13925518-13925681,13925879-13925978,
13926072-13926244,13926486-13927016
Length = 323
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 569 GDGGHRSRYESRFRRAGRRSLGPEVLGGAFAGSFRGA 459
G G S Y SRF S G GG++AG GA
Sbjct: 230 GYRGESSLYSSRFGSTYGGSFGGGYAGGSYAGGLGGA 266
>05_06_0094 +
25477367-25477398,25477516-25477891,25478292-25478315,
25479069-25481828
Length = 1063
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 379 KETATEPPSCVLCCKQGHTANYRG 450
K T + P+CV C+ H+ Y+G
Sbjct: 460 KSTDAQTPNCVSACRNMHSEGYQG 483
>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
Length = 323
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 229 GGHRRGPLQRGTPGQCHRCQLYGHSARNC 315
G +R G PG C C GH AR+C
Sbjct: 116 GEYRGGRGDGPPPGNCFECGRAGHWARDC 144
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 298 HSARNCNARPRCVKCLEDHATTD-CSRVKETATEPPSCVLCCKQG 429
HSA + +A+P LE+ + + C +E P CV+C + G
Sbjct: 52 HSADHLSAQPGNGNELEESSVKERCFEQREALVGEPRCVICGRYG 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,328,785
Number of Sequences: 37544
Number of extensions: 444747
Number of successful extensions: 1710
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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