Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0718.Seq
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 37 0.014
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 37 0.014
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05) 36 0.018
SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.072
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 34 0.072
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 34 0.072
SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 34 0.072
SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046) 34 0.072
SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 34 0.072
SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 34 0.072
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 34 0.072
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 34 0.072
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12) 34 0.096
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024) 33 0.13
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 33 0.22
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 32 0.29
SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022) 32 0.39
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 31 0.67
SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08) 31 0.67
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05) 31 0.89
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 30 1.6
SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 30 1.6
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20) 30 1.6
SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018) 30 1.6
SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 30 1.6
SB_23731| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_19135| Best HMM Match : Ribosomal_L13e (HMM E-Value=0) 30 1.6
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_55988| Best HMM Match : bZIP_1 (HMM E-Value=7.4e-06) 29 2.1
SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 29 2.7
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 29 2.7
SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_48337| Best HMM Match : zf-CCHC (HMM E-Value=9.3) 29 3.6
SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034) 29 3.6
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35030| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.3e-05) 29 3.6
SB_34577| Best HMM Match : zf-CCHC (HMM E-Value=9.3) 29 3.6
SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17795| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 29 3.6
SB_52621| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.4e-05) 29 3.6
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064) 28 4.8
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06) 28 6.3
SB_18823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31) 28 6.3
SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 6.3
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 6.3
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 27 8.3
SB_18654| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 27 8.3
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 27 8.3
SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 27 8.3
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 27 8.3
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNA---RPRCVKCLE-DHATTDCSRVKETATEPPSCVLCCKQGHTA 438
C+RC + GH AR+C+A R C +C E H DC K+ C C + H A
Sbjct: 56 CYRCNMSGHFARDCDAESSRDVCYRCQETGHFARDCPNEKK-----EGCYTCGDESHIA 109
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 247 PLQRGTPGQ-CHRCQLYGHSARNCNARPRCVKC-LEDHATTDC 369
P ++ +PG+ C+RC GH AR+C +C KC H DC
Sbjct: 113 PEKKESPGESCYRCGKSGHFARDCTDDTKCYKCGNTGHIRRDC 155
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPS 405
C+ C GH A C A C KC H T+ C RV+ + PPS
Sbjct: 305 CYNCTKGGHMATKCKAG-NCAKCNSRHHTSICDRVQSSL--PPS 345
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPS 405
C+ C GH A C A C KC H T+ C RV+ + PPS
Sbjct: 199 CYNCTKGGHMATKCKAG-NCAKCNSRHHTSICDRVQSSL--PPS 239
>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 268 GQCHRCQLYGHSARNCNARPRCVKCLEDHAT 360
G C C +GH RNC + C+ C E H T
Sbjct: 342 GLCWGCLTWGHDNRNCKIKKTCISCRELHPT 372
>SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05)
Length = 437
Score = 36.3 bits (80), Expect = 0.018
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPE 186
QEE E+R+V+ K E I++ L+ + H + R + + D A +
Sbjct: 108 QEENEMRIVVSVTKK---AEHIRDQLIDKC----KSHNLRKNRIRGSTD----AKTRQEQ 156
Query: 187 GKKIASCLRTVWPIGGHR-RGPLQRGTPGQCHRCQLYGHSAR--NCNARPR-CVKC 342
K I + T + R R ++G C+RC + GH ++ C AR R C KC
Sbjct: 157 AKSIENSFETAGKVNYLRGREEKEKGKGKHCNRCGMEGHFSKEPECKARGRMCNKC 212
>SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 124 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 171
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 133 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 180
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 196 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 243
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 34.3 bits (75), Expect = 0.072
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK------ETATEP 399
P +R P + +R + +SA R RC CL +H +CS+VK +
Sbjct: 20 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVKLPKDRINILRKF 79
Query: 400 PSCVLCCKQGHTAN 441
C +C K+GH +N
Sbjct: 80 GRCFICLKKGHRSN 93
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 268 GQCHRCQLYGHSARNCNARPRCVKCLEDHATTDC---SRVKETATEPPS 405
G+C C GH + C + C C H + C RV E T S
Sbjct: 80 GRCFICLKKGHRSNECFNKDGCSDCRGRHHVSICYERERVNENVTNGAS 128
>SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 382
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 230 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 277
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = -3
Query: 569 GDGGHRSRYESRFRRAGRRSLGPEVLGGAFAGSFRGALEHPR*LAVCPCLQQSTQLGGSV 390
G GG ++E R+R GR GP GG F G F G P +C ++ +G +
Sbjct: 148 GRGGG-DQFERRYRGGGRGPFGPVFGGGNFGGGFGGDFGGPLEEEICVGEEEGVAVGEDL 206
Query: 389 AV 384
V
Sbjct: 207 EV 208
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 261 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 308
>SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 403
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 124 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 171
>SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046)
Length = 338
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 87 GRCHRCNRQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 134
>SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 438
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 184 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 231
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 54 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 101
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 34.3 bits (75), Expect = 0.072
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK------ETATEP 399
P +R P + +R + +SA R RC CL +H +CS+VK +
Sbjct: 296 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVKLPKDRINILRKF 355
Query: 400 PSCVLCCKQGHTAN 441
C +C K+GH +N
Sbjct: 356 GRCFICLKKGHRSN 369
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 268 GQCHRCQLYGHSARNCNARPRCVKCLEDHATTDC---SRVKETATEPPS 405
G+C C GH + C + C C H + C RV E T S
Sbjct: 356 GRCFICLKKGHRSNECFNKDGCSDCRGRHHVSICYERERVNENVTNGAS 404
>SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 297
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 295
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 202 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 249
>SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 84 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 131
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 162 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 209
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 33.9 bits (74), Expect = 0.096
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC GH A + C+ C KC + C + K+T+ + S
Sbjct: 1021 GRCHRCNKQGHKAADCRCSQNHHCEKCGKIGHFKVCCKSKQTSGKAKS 1068
>SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12)
Length = 469
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARPRCVKCLED-HATTDCSRV-----KETATEPPSCVLCCKQGH 432
+CH C GH A +C C H TT R+ E P C C K+GH
Sbjct: 125 RCHNCNERGHMAVDCPDPKDCPDLWRQYHRTTQVGRIVQPTEDEDTDRPVYCYNCAKEGH 184
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARPRCVKCLEDHATTDC--SRVKETATEPPS 405
+C C GH+ C RC+ C H DC + +E EPPS
Sbjct: 527 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCTFNCQREEEGEPPS 573
>SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
Length = 90
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARPRCVKCLEDHATTDC--SRVKETATEPPS 405
+C C GH+ C RC+ C H DC + +E EPPS
Sbjct: 19 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCTFNCQREEEGEPPS 65
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 259 GTPGQCHRCQLYGHSARNCNARPRCVKC-LEDHATTDC 369
G P +C C GH C R RC +C H C
Sbjct: 147 GQPAECGYCHQVGHPISTCPVRGRCFRCGAAGHVVARC 184
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
P ++ + +CHRC GH A + C+ +C KC + C + K+T+ + S
Sbjct: 148 PSKQNSFVRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 202
>SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022)
Length = 297
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 268 GQCHRCQLYGHSARN--CNARPRCVKCLEDHATTDCSRVKETATEPPS 405
G+CHRC H A + C+ +C KC + C + K+T+ + S
Sbjct: 204 GRCHRCNKQAHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKS 251
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +1
Query: 244 GPLQRGTPGQCHRCQLYGHSARNC----NARPRCVKCLE-DHATTDCSRVKETATEP 399
G RG+ G CH+C GH AR C C KC E H + +C + +P
Sbjct: 373 GRSDRGS-GTCHKCGEVGHFARECPTGRGQSDTCHKCGETGHYSRECPTLGNGGLDP 428
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 232 GH--RRGPLQRGTPGQCHRCQLYGHSARNC 315
GH R P RG CH+C GH +R C
Sbjct: 389 GHFARECPTGRGQSDTCHKCGETGHYSREC 418
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 262 TPGQCHRCQLYGHSARNCNARPR-CVKCLE-DHATTDCSRVKETATEP 399
TP CH Q AR C PR C CL+ H T+C +++ P
Sbjct: 873 TPNSCHHSQREADHAREC---PRCCFSCLKRGHPQTECRSIQKYEKGP 917
>SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08)
Length = 256
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLE-DHATTDCSRVKET 387
C C +GH+ R C C KC E H + DC + ET
Sbjct: 109 CMECSDFGHTRRKC-PNIECRKCKERGHISFDCPKHDET 146
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 166 ALEATPE-GKKIASCLRTVWPIGGHR-RGPLQRGTPGQCHRCQLYGHSARN--CNARPR- 330
A+EA K I + T + R R ++G C+RC + GH +++ C AR R
Sbjct: 1490 AMEAAESLAKFIENSFETTGKVNSLRGRQEKEKGKGKHCYRCGMEGHFSKDPECKARGRM 1549
Query: 331 CVKCLE 348
C KC E
Sbjct: 1550 CNKCGE 1555
>SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05)
Length = 525
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 112 VHRMHSGRDKFAYDMVLVALEATPEGKKIASCLRTVWPIGGHRRGPLQRGTPG-QCHRCQ 288
VH + S D +Y M++ ALEA E K+ + G +R G +C+ C
Sbjct: 203 VHLLASLPD--SYSMLVTALEANSEESKLKEKSSSSGGEVKAMAGEHRRRNKGLRCYHCH 260
Query: 289 LYGHSARNC 315
+GH R+C
Sbjct: 261 KFGHIKRDC 269
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +1
Query: 274 CHRCQLYGHSARNC-NARP---RCVKCLED-HATTDC 369
CH+C GH AR C NA +C KC E H +C
Sbjct: 466 CHKCNEEGHFARECPNADSGGNKCFKCNESGHFAREC 502
>SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 468
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDC 369
C C GH CN R C KC H T+ C
Sbjct: 112 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 142
>SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 289
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDC 369
C C GH CN R C KC H T+ C
Sbjct: 175 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 205
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDC 369
C C GH CN R C KC H T+ C
Sbjct: 337 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 367
>SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Frame = +1
Query: 112 VHRMHSGRDKFAYDMVLVALEATPEGKKIASCLRTVWPI-------GGH---RRGPLQRG 261
VH + S D +Y M++ ALEA E K+ L + GG G +R
Sbjct: 22 VHLLASLPD--SYSMLVTALEANSEVPKMERLLHEESKLKEKSSSSGGEVNAMAGEHRRR 79
Query: 262 TPG-QCHRCQLYGHSARNC 315
G +CH C +GH+ R+C
Sbjct: 80 NKGPRCHHCHKFGHTKRDC 98
>SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20)
Length = 591
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLC-CKQGHTANYR 447
QC CQ Y R+ N +C E + +C T P C C G+TAN R
Sbjct: 154 QCSACQNYT-CKRDYN------ECSEQ--SDECDHTLATCVNTPGSYACACPVGYTANGR 204
Query: 448 GC 453
GC
Sbjct: 205 GC 206
>SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018)
Length = 1066
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +1
Query: 268 GQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYR 447
G C C H AR+C + C C + HAT E P + C H ++
Sbjct: 598 GICFACLKPRHLARDCKEKRECSICKKRHATLLHYPKPEETPAPKATSNCTSICHLSDCN 657
Query: 448 GCSKAPRKLP 477
+ A R LP
Sbjct: 658 ATTSA-RILP 666
>SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 449
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDC 369
C C GH CN R C KC H T+ C
Sbjct: 112 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 142
>SB_23731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1133
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVK--C-LEDHATTDCSRVKETATE 396
C C GH A +C + RC+K C L+ H RV E+ +E
Sbjct: 189 CRNCLKEGHFADSCPSSGRCLKEGCGLKHHTLLHSERVDESKSE 232
>SB_19135| Best HMM Match : Ribosomal_L13e (HMM E-Value=0)
Length = 600
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 373 RVKETATEPPSCVLCCKQGHTANYRGCSKAPR-KLPANAPPKTSG 504
R +E + P+C C ++GH A GC K P+ N PP+ G
Sbjct: 359 RAQEPCGDRPTCYNCGERGHVA--IGCRKPPQFHNQGNRPPQQFG 401
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
G RG + G+ +C+ C GH AR+C R
Sbjct: 105 GPSRGRPRMGSNEKCYECGRVGHFARDCTRR 135
>SB_55988| Best HMM Match : bZIP_1 (HMM E-Value=7.4e-06)
Length = 150
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 301 SARNCNARPRC-VKCLEDHATTDCSRVKETATEPPSCVLCCK 423
SAR C AR + KCLED T S V + E V CK
Sbjct: 86 SARECRARKKLRYKCLEDTVTRKESEVSKLRQELDMYVRWCK 127
>SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1292
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 373 RVKETATEPPSCVLCCKQGHTANYRGCSKAPR-KLPANAPPKTSG 504
R +E + + P+C C ++GH A GC P+ + N PP+ G
Sbjct: 226 RAQEPSGDRPTCYNCGERGHVA--IGCRNPPQFRNQGNRPPQQFG 268
>SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 262 TPGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATE 396
T QC +C H A+ ++ VKC++D TTD S +E E
Sbjct: 124 TGKQCIKCSKMNHFAKMYKSKVTSVKCVDDD-TTDESTEEEDDDE 167
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 331 CVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSKAPRKLPA 480
C KCL H T DC KE T +C C K+ H + + + P+ A
Sbjct: 375 CRKCLRRHHTDDCH--KEDGT---TCNQCSKRHHRSLHSEIAALPKSFGA 419
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 14/66 (21%)
Frame = +1
Query: 244 GPLQRGTPGQCHRCQLYGHS------ARNC----NARPRCVKCLEDHATTDCSRVKE--- 384
G GT C C G AR+C + P C C E HA C R ++
Sbjct: 5 GDATNGTSSDCRECPCPGGPFSANSFARSCVLGSDGLPTCTNCSESHAGRQCERCQDGYY 64
Query: 385 -TATEP 399
T T+P
Sbjct: 65 GTPTDP 70
>SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK 381
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 89 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 136
>SB_48337| Best HMM Match : zf-CCHC (HMM E-Value=9.3)
Length = 146
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK 381
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 89 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 136
>SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034)
Length = 193
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 268 GQCHRCQLY--GHSARNCNARPRCVKCLEDHAT 360
G C C L GH + +C P C KC H T
Sbjct: 99 GYCFNCGLEKPGHGSSSCPDLPACTKCPGRHLT 131
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 36 TRSPQRARRRANQK*PGRSVLPRHKRAPDAQRSR*IRV*YGARSTRSHTGGQENCLMSPH 215
TRS R RA Q+ P S P + P Q V GA + R H+GG + P+
Sbjct: 1032 TRSTIDDRSRAVQQYPRDSAPPAWAQVPTMQIPNARGVYSGAPADRRHSGGAD-ARFDPY 1090
Query: 216 RVA-YRGSP*R 245
+ A RG P R
Sbjct: 1091 KGAPQRGGPVR 1101
>SB_35030| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.3e-05)
Length = 353
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK 381
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 296 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 343
>SB_34577| Best HMM Match : zf-CCHC (HMM E-Value=9.3)
Length = 146
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK 381
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 89 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 136
>SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQCHRCQLYGHSARNCNARPRCVK 339
G + P ++G C +C GH ARNC A PR K
Sbjct: 361 GRQHKPRRKGDI-TCFKCNQQGHIARNCTA-PREAK 394
>SB_17795| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 272
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK 381
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 215 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 262
>SB_52621| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.4e-05)
Length = 332
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLEDHATTDCSRVK 381
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 275 PDERPAPQEQNRGKQGPNSASALATAGTRKRCAFCLGEHQEDECSKVK 322
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 310 NCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANY 444
N N+ C KC + +DCS V T T S V+ C+ A+Y
Sbjct: 1287 NANSSSDCTKCSQGWNASDCS-VALTDTPNISSVIFCQGFGAAHY 1330
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKC 342
C+RC H AR+C A +C C
Sbjct: 3 CYRCHDPSHFARDCRAPIQCATC 25
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 428 DTRPTTVDAPRLHGSSRQTRPLKPL 502
DTRP D PRLHGS ++T PL
Sbjct: 1596 DTRPD--DVPRLHGSHQETHRKWPL 1618
>SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064)
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Frame = +1
Query: 259 GTPGQCHRCQLYGHSARNC-NARPRCVKCLEDHATTDCSRV---KETATEPPSCVLCCKQ 426
G P C RC GH + C R R + + TT+ R+ +E T PP
Sbjct: 198 GQPQSCLRCSEIGHGVKECTKPRRRPHRRRREELTTEQERMQCAQEEETLPPLSPDLPLP 257
Query: 427 GHTANYRGCSKAPRKLPANAPPKT 498
TA+ R + PA A T
Sbjct: 258 TETASDREKDQDEAAAPATAQEHT 281
>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
Length = 956
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 271 QCHRCQLYGHSARNCNARPRCVKCLEDH 354
QCH CQ GH A C + + V ++DH
Sbjct: 201 QCHNCQKIGHFATVCQSAKQ-VHEVDDH 227
>SB_18823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 313 SYARSGHITGNGGTARECRVVGGLYGDPR*ATRCGDMRQFSCPPVWLLVLRAP 155
S R GH +G +++ RV G R R G R SC P LVL P
Sbjct: 26 SAKRVGHARCDGSKSKDERVGPARCGTKRKDKRLGHARSNSCSPGDPLVLERP 78
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 236 TVEAPYNAALPGSATVASYMATPRVTATRDRVA 334
T P A+PG+ V+ +ATP TA + A
Sbjct: 44 TTTVPGTTAVPGTTAVSETVATPETTAAPETTA 76
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 236 TVEAPYNAALPGSATVASYMATPRVTATRDRVA 334
T P A+PG+ V+ +ATP TA + A
Sbjct: 1976 TTTVPGTTAVPGTTAVSETVATPETTAAPETTA 2008
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
G RG ++ + +C+ C GH AR+C R
Sbjct: 75 GPSRGRPRQASNEKCYECGRVGHFARDCTRR 105
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 236 TVEAPYNAALPGSATVASYMATPRVTATRDRVA 334
T P A+PG+ V+ +ATP TA + A
Sbjct: 3131 TTTVPGTTAVPGTTAVSETVATPETTAAPETTA 3163
>SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31)
Length = 526
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
Frame = +1
Query: 259 GTPGQCHRCQLYGH----SARNCNARP 327
GTPGQC++C+ + S +CNA P
Sbjct: 275 GTPGQCYKCRKGSYKKFPSPEDCNACP 301
>SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVK--C-LEDHATTDCSRVKET 387
C C GH A +C + RC+K C L+ H RV E+
Sbjct: 129 CRNCLKEGHFADSCPSSGRCLKEGCGLKHHTLLHSERVDES 169
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 6.3
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Frame = +1
Query: 244 GPLQRGTPGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLC-- 417
G +GTP C RCQ G S+ N + C D +TT S + + + C
Sbjct: 367 GIATKGTPNDCKRCQCPGGSSGNKFSE----SCYVDTSTTPPSVLCDKCQVGYTGRQCEE 422
Query: 418 CKQGHTAN--YRGCSKAPRKLPANAPPKTSG 504
C G+ N G S P N P SG
Sbjct: 423 CADGYYGNPLVPGGSCKPCSCNNNIDPTVSG 453
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +1
Query: 172 EATPEGKKIASCLRTVWPIGGHRRGPLQRGTPGQCHRCQLYGHSARN 312
+A PEG+ + CLR P+ P C C + RN
Sbjct: 612 QACPEGQPVVMCLRDPCESASCPANPMATCRPNYCGTCSAEFYDERN 658
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 37 RGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMV 159
R P L +++I+N +VGQ +HR+ S + KF +D V
Sbjct: 202 RPEPMVLSLDRIRN-VVGQDRFDDYIHRLPSQQQKFCFDAV 241
>SB_18654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 232 GHRRGP--LQRGTPGQCHRCQLYGHSARNCNARPRCVKCLEDHATT 363
G +R P L+ CH+ QL H +CN + ED+ T+
Sbjct: 344 GQKRVPWVLESSLGSPCHKRQLQFHKTESCNLTKPKLHRFEDYVTS 389
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKC 342
C+RC H AR+C A +C C
Sbjct: 136 CYRCLDPSHFARDCRAPIQCATC 158
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +1
Query: 229 GGHRRGPLQRG----TPGQCHRCQLYGHSARNC 315
GG RRG G G C +C GH A+NC
Sbjct: 428 GGTRRGGFGSGWGGGQAGTCFKCGQEGHWAKNC 460
>SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 858
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +1
Query: 226 IGGHRRGPLQRGTPGQCHRCQLYGHSARNCNARPRCV--KCLEDHATTDCSRVKETATE 396
+ G+ G G P C RC GH ++C R + +D+ T+ S + T E
Sbjct: 215 VQGYSLGFRYTGQPPSCVRCSQIGHYVKDCTRLRRRTHRRRRDDNNDTESSEERPTDRE 273
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +1
Query: 256 RGTPGQCHRCQLYGHSARNCNARPRCVK-CLEDHATTDCSRVKETATEPP--SCVLCC 420
+GT G C + G CN R C + C E T + K E P C + C
Sbjct: 377 KGTYGSCDQTCERGKCQLRCNTRENCKQTCKEGKCLTMSCKAKNCDQECPGNQCRMAC 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,628,819
Number of Sequences: 59808
Number of extensions: 453109
Number of successful extensions: 2021
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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