Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0718.Seq
(577 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 77 2e-14
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 65 7e-11
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 64 2e-10
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 64 2e-10
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 62 4e-10
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 62 4e-10
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 61 9e-10
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 60 2e-09
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 60 2e-09
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 60 2e-09
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 60 2e-09
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 60 2e-09
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 60 3e-09
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 60 3e-09
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 59 5e-09
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 42 5e-04
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 42 5e-04
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 42 5e-04
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 42 5e-04
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 42 6e-04
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 42 6e-04
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 35 0.069
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 33 0.37
AY113198-1|AAM29203.1| 425|Drosophila melanogaster AT03090p pro... 31 1.5
AE013599-3068|AAF57424.3| 425|Drosophila melanogaster CG13442-P... 31 1.5
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 30 2.6
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 30 2.6
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 30 2.6
AY052096-1|AAK93520.1| 574|Drosophila melanogaster SD04526p pro... 29 3.4
AE014296-3703|AAN12199.1| 574|Drosophila melanogaster CG32452-P... 29 3.4
AE014296-3702|AAN12198.1| 574|Drosophila melanogaster CG32452-P... 29 3.4
AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 29 6.0
AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 29 6.0
AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 29 6.0
AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 29 6.0
U93032-1|AAB63449.1| 492|Drosophila melanogaster MAP kinase kin... 28 7.9
BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro... 28 7.9
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro... 28 7.9
AY071441-1|AAL49063.1| 151|Drosophila melanogaster RE52596p pro... 28 7.9
AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p pro... 28 7.9
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 28 7.9
AE014298-1842|AAF48222.1| 492|Drosophila melanogaster CG4353-PC... 28 7.9
AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA... 28 7.9
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ... 28 7.9
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 28 7.9
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 28 7.9
AE014134-841|AAF52201.2| 151|Drosophila melanogaster CG31917-PA... 28 7.9
AE013599-2407|AAF57913.1| 498|Drosophila melanogaster CG9642-PA... 28 7.9
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 76.6 bits (180), Expect = 2e-14
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Frame = +1
Query: 4 LQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVH----RMHSGRDKFA-YDMVLVA 168
L+E+R RV ++G+ QIK++L + V+ +H R G K + +M +
Sbjct: 193 LKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLRRNEPGTSKASPVNMFFLN 252
Query: 169 LEATPEGKKIASCLRTVWPIGGHRRGPLQRGTPGQCHRCQLYGHSARNCNARPRCVKCLE 348
+ A K+I + ++ + + +R QCHRCQ GH+A+ C CVKC
Sbjct: 253 IAAAANNKEILA-VKALCHMRVVIEPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAG 311
Query: 349 DHATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSKAPRKLPANAP 489
+H DC+R + E +C C Q H ANY+GCSK L + P
Sbjct: 312 EHPAKDCTRPR---IELCTCYNCGGQ-HPANYKGCSKLQAFLQRSRP 354
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 64.9 bits (151), Expect = 7e-11
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPE 186
+ ER RVVIR + I +L+ + V M + M V + +
Sbjct: 566 KSERGFRVVIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIAMAKD 625
Query: 187 GKKIASCLRTVWPIGGHRRGPLQRGT---PGQCHRCQLYGHSARNCNARPRCVKCLEDHA 357
G + ++ IGG R ++ P QC+RCQ + H+ +C PRC+KC DH
Sbjct: 626 GSH--DKIISLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMKPPRCMKCAGDHL 683
Query: 358 TTDCSRVKETATEPPSCVLCCKQGHTANYRGCS--KAPR-KLPAN 483
++ C++ + T P +CV C + H + Y+GC KA + KL AN
Sbjct: 684 SSCCTKPRST---PATCVNCSGE-HISAYKGCPTYKAEKQKLAAN 724
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 63.7 bits (148), Expect = 2e-10
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPE 186
+ ER RV+IR + I +L+ + V M + M V + +
Sbjct: 558 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 617
Query: 187 GKKIASCLRTVWPIGGHRRGPLQRGT---PGQCHRCQLYGHSARNCNARPRCVKCLEDHA 357
G + ++ IGG R ++ P QC+RCQ + H+ +C PRC+KC +H
Sbjct: 618 GSH--DKILSLKQIGGQRVDIERKNRTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHL 675
Query: 358 TTDCSRVKETATEPPSCVLCCKQGHTANYRGCS--KAPR-KLPAN 483
++ C++ + T P +CV C Q H + Y+GC KA + KL AN
Sbjct: 676 SSCCTKPR---TTPATCVNCSGQ-HISAYKGCPTYKAEKQKLAAN 716
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 63.7 bits (148), Expect = 2e-10
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPE 186
+ ER RV+IR + I +L+ + V M + M V + +
Sbjct: 536 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 595
Query: 187 GKKIASCLRTVWPIGGHRRGPLQRGT---PGQCHRCQLYGHSARNCNARPRCVKCLEDHA 357
G + ++ IGG R ++ P QC+RCQ + H+ +C PRC+KC +H
Sbjct: 596 GSH--DKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHL 653
Query: 358 TTDCSRVKETATEPPSCVLCCKQGHTANYRGCS--KAPR-KLPAN 483
++ C++ + T P +CV C Q H + Y+GC KA + KL AN
Sbjct: 654 SSCCTKPR---TTPATCVNCSGQ-HISAYKGCPAYKAEKQKLAAN 694
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 62.5 bits (145), Expect = 4e-10
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Frame = +1
Query: 4 LQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATP 183
L+ + L+VV++G+ + +I L +++ + + + +DK + + LE P
Sbjct: 290 LKSCKGLQVVLKGIEATVTPAEIIEALKAKNFSAKTAINILN-KDKVPQPLFKIELE--P 346
Query: 184 EGKKIASCLRTVWPIGG-----HRR----GPLQRGTPGQCHRCQLYGHSARNCNARPRCV 336
E + + V PI HRR P +R P QC CQ YGH+ C + CV
Sbjct: 347 ELQALKK--NEVHPIYNLQYLLHRRITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCV 404
Query: 337 KCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC 453
C E H T +C + K+ + C C ++ HTANYRGC
Sbjct: 405 VCSEPHTTANCPKNKDDKS-VKKCSNCGEK-HTANYRGC 441
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 62.5 bits (145), Expect = 4e-10
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Frame = +1
Query: 4 LQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATP 183
L+ + L+VV++G+ + +I L +++ + + + +DK + + LE P
Sbjct: 134 LKSCKGLQVVLKGIEATVTPAEIIEALKAKNFSAKTAINILN-KDKVPQPLFKIELE--P 190
Query: 184 EGKKIASCLRTVWPIGG-----HRR----GPLQRGTPGQCHRCQLYGHSARNCNARPRCV 336
E + + V PI HRR P +R P QC CQ YGH+ C + CV
Sbjct: 191 ELQALKK--NEVHPIYNLQYLLHRRITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCV 248
Query: 337 KCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC 453
C E H T +C + K+ + C C ++ HTANYRGC
Sbjct: 249 VCSEPHTTANCPKNKDDKS-VKKCSNCGEK-HTANYRGC 285
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/69 (44%), Positives = 35/69 (50%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQ 426
P +R P QC CQ YGH+ C P CV C + H + C KE A E C C
Sbjct: 31 PHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE-KKC-NNCGG 88
Query: 427 GHTANYRGC 453
HTANYRGC
Sbjct: 89 NHTANYRGC 97
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANY 444
P QCHRCQ +GH+ C +C+KC + HAT C++ K P +C C H ++Y
Sbjct: 792 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCA-NCNGSHVSSY 847
Query: 445 RGC 453
+GC
Sbjct: 848 KGC 850
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANY 444
P QCHRCQ +GH+ C +C+KC + HAT C++ K P +C C H ++Y
Sbjct: 715 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCA-NCNGSHVSSY 770
Query: 445 RGC 453
+GC
Sbjct: 771 KGC 773
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANY 444
P QCHRCQ +GH+ C +C+KC + HAT C++ K P +C C H ++Y
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCA-NCNGSHVSSY 57
Query: 445 RGC 453
+GC
Sbjct: 58 KGC 60
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANY 444
P QCHRCQ +GH+ C +C+KC + HAT C++ K P +C C H ++Y
Sbjct: 715 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCA-NCNGSHVSSY 770
Query: 445 RGC 453
+GC
Sbjct: 771 KGC 773
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 60.5 bits (140), Expect = 2e-09
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHS---GRDKFAYDMVLVALEA 177
+ ER RV+IR + I +L+ + M + G +++ +V +
Sbjct: 573 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFARNMTNPATGGPMRMFEVEIVMAKD 632
Query: 178 TPEGKKIASCLRTVWPIGGHRRGPLQRGT---PGQCHRCQLYGHSARNCNARPRCVKCLE 348
+ GK I+ + +GG R ++ P QC+RCQ + HS +C PRC+KC
Sbjct: 633 SSHGKIIS-----LKQLGGQRVDIERKNRTREPVQCYRCQGFRHSKNSCMRPPRCMKCAG 687
Query: 349 DHATTDCSRVKETATEPPSCVLCCKQGHTANYRGC---SKAPRKLPAN 483
H ++ C++ + T P +CV C + H + Y+GC RKL N
Sbjct: 688 GHLSSCCTKPR---TTPATCVNCSGE-HISAYKGCPAYKTEKRKLAVN 731
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 59.7 bits (138), Expect = 3e-09
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPE 186
+ ER RV+IR + I +L+ + V M + M V + +
Sbjct: 151 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 210
Query: 187 GKKIASCLRTVWPIGGHRRGPLQRGT---PGQCHRCQLYGHSARNCNARPRCVKCLEDHA 357
G + ++ IGG R ++ P QC+RCQ + H+ +C PRC+K +H
Sbjct: 211 GSH--DKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHL 268
Query: 358 TTDCSRVKETATEPPSCVLCCKQGHTANYRGCS--KAPR-KLPAN 483
++ C++ + T P +CV C Q H + Y+GC KA + KL AN
Sbjct: 269 SSCCTKPR---TTPATCVNCSGQ-HISAYKGCPAYKAEKQKLAAN 309
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 59.7 bits (138), Expect = 3e-09
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 7 QEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPE 186
+ ER RV+IR + I +L+ + V M + M V + +
Sbjct: 151 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 210
Query: 187 GKKIASCLRTVWPIGGHRRGPLQRGT---PGQCHRCQLYGHSARNCNARPRCVKCLEDHA 357
G + ++ IGG R ++ P QC+RCQ + H+ +C PRC+K +H
Sbjct: 211 GSH--DKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHL 268
Query: 358 TTDCSRVKETATEPPSCVLCCKQGHTANYRGCS--KAPR-KLPAN 483
++ C++ + T P +CV C Q H + Y+GC KA + KL AN
Sbjct: 269 SSCCTKPR---TTPATCVNCSGQ-HISAYKGCPAYKAEKQKLAAN 309
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 58.8 bits (136), Expect = 5e-09
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANY 444
P QCHRCQ +GH+ C +C+KC + HA+ C++ K P +C C H ++Y
Sbjct: 792 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL---PATCA-NCNGSHVSSY 847
Query: 445 RGC 453
+GC
Sbjct: 848 KGC 850
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQCHRCQLYGHSARNC-NARPRCVKCLE-DHATTDCSRVKETATEPPS 405
G+ G ++R +C++C +GH AR C RC +C H + DC T + P+
Sbjct: 44 GNDGGGMRRNRE-KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPT 97
Query: 406 CVLCCKQGHTANYRGCSKA 462
C C K GH R C +A
Sbjct: 98 CYRCNKTGHWV--RNCPEA 114
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQCHRCQLYGHSARNC-NARPRCVKCLE-DHATTDCSRVKETATEPPS 405
G+ G ++R +C++C +GH AR C RC +C H + DC T + P+
Sbjct: 44 GNDGGGMRRNRE-KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPT 97
Query: 406 CVLCCKQGHTANYRGCSKA 462
C C K GH R C +A
Sbjct: 98 CYRCNKTGHWV--RNCPEA 114
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKC-LEDHATTDCSRV 378
P +C CQL GH++++C P CV C L H C+R+
Sbjct: 201 PMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTRI 239
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 232 GHRRGPLQRGTPGQCHRCQLYGHSARNC-NARPRCVKCLE-DHATTDCSRVKETATEPPS 405
G+ G ++R +C++C +GH AR C RC +C H + DC T + P+
Sbjct: 44 GNDGGGMRRNRE-KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPT 97
Query: 406 CVLCCKQGHTANYRGCSKA 462
C C K GH R C +A
Sbjct: 98 CYRCNKTGHWV--RNCPEA 114
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 41.9 bits (94), Expect = 6e-04
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Frame = +1
Query: 4 LQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVH--------RMHSGRD------- 138
L+EE+ RVV++G+ + QI+ Y V++++ + D
Sbjct: 266 LKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIYCPRKSDWKNIQVNEDDNEATKN 325
Query: 139 -KFAYDMVLVALEATPEGKKIASCLRTVWPIGGHRRGPLQRGTPG----QCHRCQLYGHS 303
K ++ + L+ P K+ R G R ++R T QC RCQ++GHS
Sbjct: 326 FKTRQNLFYINLKQGPNVKESLKITRL-----GRYRVTVERATRRKELLQCQRCQIFGHS 380
Query: 304 ARNCNARPRCVKCLEDHAT 360
C P C KC H T
Sbjct: 381 KNYCAQDPICGKCSGPHMT 399
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 41.9 bits (94), Expect = 6e-04
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Frame = +1
Query: 4 LQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVH--------RMHSGRD------- 138
L+EE+ RVV++G+ + QI+ Y V++++ + D
Sbjct: 300 LKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIYCPRKSDWKNIQVNEDDNEATKN 359
Query: 139 -KFAYDMVLVALEATPEGKKIASCLRTVWPIGGHRRGPLQRGTPG----QCHRCQLYGHS 303
K ++ + L+ P K+ R G R ++R T QC RCQ++GHS
Sbjct: 360 FKTRQNLFYINLKQGPNVKESLKITRL-----GRYRVTVERATRRKELLQCQRCQIFGHS 414
Query: 304 ARNCNARPRCVKCLEDHAT 360
C P C KC H T
Sbjct: 415 KNYCAQDPICGKCSGPHMT 433
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 35.1 bits (77), Expect = 0.069
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLED 351
C RC +GH A+ C A PRC+ C D
Sbjct: 431 CLRCGEHGHKAKGCVAPPRCLICSSD 456
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +1
Query: 196 IASCLRTVWPIGGHRRGPLQRGTPGQCHRCQLYGHSARNCNARPR---CVKCLE-DHATT 363
IA R V +G R Q P +C RC +GH A C + R C++C E H
Sbjct: 383 IAVINRGVVTVGWSRCRIAQDVRPIRCFRCLEFGHRAPYCKSVDRSDCCLRCGEHGHKAK 442
Query: 364 DCSRVKETATEPPSCVLC 417
C PP C++C
Sbjct: 443 GC-------VAPPRCLIC 453
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 265 PGQCHRCQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLC 417
P +C +C +GH C + C+ C E T D E T +C+ C
Sbjct: 185 PLRCKKCLRFGHPTPICKSVETCINCSETKHTND----GEKCTNEKNCLNC 231
>AY113198-1|AAM29203.1| 425|Drosophila melanogaster AT03090p
protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +2
Query: 119 GCTAVAINSRMIWCS*H*KPHRRARKLPHVSAPCGLSGVTVEAPYNAALPGSATVASYMA 298
G TA A + ++ CS KP+ + +KLPH S P V+ E A+ +AT +SY A
Sbjct: 72 GTTADAEDPQIPACSLGLKPNVQFQKLPHPSHPL----VSTE-----AVLAAATSSSYSA 122
Query: 299 TPRVTATRDRVA 334
P A D +A
Sbjct: 123 GPPKAAATDSIA 134
>AE013599-3068|AAF57424.3| 425|Drosophila melanogaster CG13442-PA
protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +2
Query: 119 GCTAVAINSRMIWCS*H*KPHRRARKLPHVSAPCGLSGVTVEAPYNAALPGSATVASYMA 298
G TA A + ++ CS KP+ + +KLPH S P V+ E A+ +AT +SY A
Sbjct: 72 GTTADAEDPQIPACSLGLKPNVQFQKLPHPSHPL----VSTE-----AVLAAATSSSYSA 122
Query: 299 TPRVTATRDRVA 334
P A D +A
Sbjct: 123 GPPKAAATDSIA 134
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/59 (25%), Positives = 20/59 (33%)
Frame = +1
Query: 283 CQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSK 459
C G +CN KCL + +C R K P+C C C+K
Sbjct: 497 CNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNK 555
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/59 (25%), Positives = 20/59 (33%)
Frame = +1
Query: 283 CQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSK 459
C G +CN KCL + +C R K P+C C C+K
Sbjct: 497 CNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNK 555
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/59 (25%), Positives = 20/59 (33%)
Frame = +1
Query: 283 CQLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHTANYRGCSK 459
C G +CN KCL + +C R K P+C C C+K
Sbjct: 497 CNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNK 555
>AY052096-1|AAK93520.1| 574|Drosophila melanogaster SD04526p
protein.
Length = 574
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 27 RRNTRSPQRARRRANQK*PGRSVLPRHKRAPD-AQRSR*IRV*YGARSTRSHTGGQENCL 203
R R R RR + P R L R+PD RSR + G+R G + L
Sbjct: 255 RSRKRCYSRDRRERRSRLPSRRKLISRSRSPDHRSRSRYRSLGKGSRHASPCAGNRHRSL 314
Query: 204 MSP---HRVAYRGSP*R 245
SP R+ R SP R
Sbjct: 315 RSPSVERRLGSRNSPVR 331
>AE014296-3703|AAN12199.1| 574|Drosophila melanogaster CG32452-PB,
isoform B protein.
Length = 574
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 27 RRNTRSPQRARRRANQK*PGRSVLPRHKRAPD-AQRSR*IRV*YGARSTRSHTGGQENCL 203
R R R RR + P R L R+PD RSR + G+R G + L
Sbjct: 255 RSRKRCYSRDRRERRSRLPSRRKLISRSRSPDHRSRSRYRSLGKGSRHASPCAGNRHRSL 314
Query: 204 MSP---HRVAYRGSP*R 245
SP R+ R SP R
Sbjct: 315 RSPSVERRLGSRNSPVR 331
>AE014296-3702|AAN12198.1| 574|Drosophila melanogaster CG32452-PA,
isoform A protein.
Length = 574
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 27 RRNTRSPQRARRRANQK*PGRSVLPRHKRAPD-AQRSR*IRV*YGARSTRSHTGGQENCL 203
R R R RR + P R L R+PD RSR + G+R G + L
Sbjct: 255 RSRKRCYSRDRRERRSRLPSRRKLISRSRSPDHRSRSRYRSLGKGSRHASPCAGNRHRSL 314
Query: 204 MSP---HRVAYRGSP*R 245
SP R+ R SP R
Sbjct: 315 RSPSVERRLGSRNSPVR 331
>AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p
protein.
Length = 258
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 226 IGGHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
+GG RG RG +C+ C GH AR+C R
Sbjct: 102 LGGRDRGGGGRGDD-KCYECGGRGHFARHCRER 133
>AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein
protein.
Length = 258
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 226 IGGHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
+GG RG RG +C+ C GH AR+C R
Sbjct: 102 LGGRDRGGGGRGDD-KCYECGGRGHFARHCRER 133
>AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family
splicing factor 9G8 protein.
Length = 258
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 226 IGGHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
+GG RG RG +C+ C GH AR+C R
Sbjct: 102 LGGRDRGGGGRGDD-KCYECGGRGHFARHCRER 133
>AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA
protein.
Length = 258
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 226 IGGHRRGPLQRGTPGQCHRCQLYGHSARNCNAR 324
+GG RG RG +C+ C GH AR+C R
Sbjct: 102 LGGRDRGGGGRGDD-KCYECGGRGHFARHCRER 133
>U93032-1|AAB63449.1| 492|Drosophila melanogaster MAP kinase kinase
protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 153 YGARSTRSHTGGQENCLMSPHRVAYRGSP*RPPTTRHSRAVPPLPVI 293
+G+ S S + + G PPTTR SRA P LP++
Sbjct: 94 FGSASASSSSSSASAFASAAPATGTFGGTYTPPTTRVSRATPTLPML 140
>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p protein.
Length = 1489
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +3
Query: 6 PGGA*TPRRNTRSPQRARRRANQK*PGRSVLPRHKRAPDAQRSR*IRV*YGARSTRSHTG 185
PG + P ++ R Q + R + P + PR++RA +S +R +RSHT
Sbjct: 1391 PGTSPPPHKHGRGRQTSTNRRYARSPSPAPSPRNERATSPVQS------VHSRRSRSHTP 1444
Query: 186 GQENCLMSPHRVAYRGSP*RPPTTRHSRA 272
+ N Y GSP P SR+
Sbjct: 1445 NRING-DGNRSSLYMGSPHYTPRISRSRS 1472
>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p protein.
Length = 1489
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +3
Query: 6 PGGA*TPRRNTRSPQRARRRANQK*PGRSVLPRHKRAPDAQRSR*IRV*YGARSTRSHTG 185
PG + P ++ R Q + R + P + PR++RA +S +R +RSHT
Sbjct: 1391 PGTSPPPHKHGRGRQTSTNRRYARSPSPAPSPRNERATSPVQS------VHSRRSRSHTP 1444
Query: 186 GQENCLMSPHRVAYRGSP*RPPTTRHSRA 272
+ N Y GSP P SR+
Sbjct: 1445 NRING-DGNRSSLYMGSPHYTPRISRSRS 1472
>AY071441-1|AAL49063.1| 151|Drosophila melanogaster RE52596p
protein.
Length = 151
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDC 369
C LY +A C R CV+CL+ H T C
Sbjct: 117 CGNFSLYSCTA--CGTRYCCVRCLQTHQDTRC 146
>AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p
protein.
Length = 1178
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 153 YGARSTRSHTGGQENCLMSPHRVAYRGSP*RPPTTRHSRAVPPLPVI 293
+G+ S S + + G PPTTR SRA P LP++
Sbjct: 94 FGSASASSSSSSASAFASAAPATGTFGGTYTPPTTRVSRATPTLPML 140
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin
alpha1,2 protein.
Length = 3367
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLEDHATTDC 369
P Q G G+C CQ YGH A +C P C C + A +C
Sbjct: 442 PYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014298-1842|AAF48222.1| 492|Drosophila melanogaster CG4353-PC,
isoform C protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 153 YGARSTRSHTGGQENCLMSPHRVAYRGSP*RPPTTRHSRAVPPLPVI 293
+G+ S S + + G PPTTR SRA P LP++
Sbjct: 94 FGSASASSSSSSASAFASAAPATGTFGGTYTPPTTRVSRATPTLPML 140
>AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA,
isoform A protein.
Length = 1178
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 153 YGARSTRSHTGGQENCLMSPHRVAYRGSP*RPPTTRHSRAVPPLPVI 293
+G+ S S + + G PPTTR SRA P LP++
Sbjct: 94 FGSASASSSSSSASAFASAAPATGTFGGTYTPPTTRVSRATPTLPML 140
>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
protein.
Length = 2296
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +3
Query: 6 PGGA*TPRRNTRSPQRARRRANQK*PGRSVLPRHKRAPDAQRSR*IRV*YGARSTRSHTG 185
PG + P ++ R Q + R + P + PR++RA +S +R +RSHT
Sbjct: 1391 PGTSPPPHKHGRGRQTSTNRRYARSPSPAPSPRNERATSPVQS------VHSRRSRSHTP 1444
Query: 186 GQENCLMSPHRVAYRGSP*RPPTTRHSRA 272
+ N Y GSP P SR+
Sbjct: 1445 NRING-DGNRSSLYMGSPHYTPRISRSRS 1472
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLEDHATTDC 369
P Q G G+C CQ YGH A +C P C C + A +C
Sbjct: 442 PYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +1
Query: 247 PLQRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLEDHATTDC 369
P Q G G+C CQ YGH A +C P C C + A +C
Sbjct: 442 PYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014134-841|AAF52201.2| 151|Drosophila melanogaster CG31917-PA
protein.
Length = 151
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 274 CHRCQLYGHSARNCNARPRCVKCLEDHATTDC 369
C LY +A C R CV+CL+ H T C
Sbjct: 117 CGNFSLYSCTA--CGTRYCCVRCLQTHQDTRC 146
>AE013599-2407|AAF57913.1| 498|Drosophila melanogaster CG9642-PA
protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 QCHRC-QLYGHSARNCNARPRCVKCLEDHATTDCSRVKETATEPPSCVLCCKQGHT 435
+C +C L R C C C DH DC R+ E L K+ HT
Sbjct: 52 RCSKCFNLTESFCRKCRLLALCEDC-SDHDERDCKRLAEMNFSDDQVELLQKKEHT 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,713,687
Number of Sequences: 53049
Number of extensions: 676816
Number of successful extensions: 2412
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2397
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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