Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0717.Seq
(751 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 69 2e-10
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease... 64 5e-09
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 60 4e-08
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 44 0.004
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole... 42 0.012
UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep: Transpo... 36 0.81
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni... 36 1.1
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 33 7.5
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 33 7.5
UniRef50_A5K7P1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +2
Query: 554 MARRAASGKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 673
M A GKPK L SGGSMVAKLKLKGIDGRAPPGVEPAA
Sbjct: 40 MTSLAPYGKPKFLGSGGSMVAKLKLKGIDGRAPPGVEPAA 79
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 453 FHQSRTKVRGSKAIRYRPS 509
F RTKVRGSK IRYRPS
Sbjct: 6 FRCQRTKVRGSKTIRYRPS 24
>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
n=4; Eukaryota|Rep: RRNA intron-encoded homing
endonuclease - Oryza sativa (Rice)
Length = 66
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = +2
Query: 536 SADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 673
SADV A K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 21 SADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 66
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2
Query: 578 KPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 673
K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 41 KSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA 72
Score = 33.5 bits (73), Expect = 5.7
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 453 FHQSRTKVRGSKAIRYRPSL 512
FH RTKV GSK IRY PSL
Sbjct: 6 FHCQRTKVGGSKMIRYHPSL 25
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 444 GKCFR*CSSCDDPRISPLTSQYECPQ 367
GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284
>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3131,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 36
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 565 GSFRETKDFGLRGEYGCKAET 627
GS RETK FG RGEYGCKAET
Sbjct: 16 GSVRETKVFGFRGEYGCKAET 36
>UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep:
Transposase - Zea mays (Maize)
Length = 738
Score = 36.3 bits (80), Expect = 0.81
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 639 SIPLSFSFATILPPESKIFGFPEAARRAIVVTSAD 535
+IPL +SFA IL P +K+ GF RR + +TS D
Sbjct: 505 NIPLLYSFAFILDPRAKMKGFSRVLRRLMNLTSTD 539
>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
Peptidase C14, caspase catalytic subunit p20 -
Polaromonas naphthalenivorans (strain CJ2)
Length = 562
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 189 RILILNRRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 28
R++ ++F V+ PR+R D AA + NY L NR+N+ + W+
Sbjct: 142 RVMSFQKKFKSPEFAAQYDRPVNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2
Query: 750 NQERAVNLSILPVSGPG 700
N+ERA+NLSIL VSGPG
Sbjct: 7 NRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2
Query: 750 NQERAVNLSILPVSGPG 700
N+ERA+NLSIL VSGPG
Sbjct: 7 NRERAINLSILSVSGPG 23
>UniRef50_A5K7P1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 4675
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 267 LARFGTLICSK*NCRPTSTLTEEHRDRILILNR-RFLERRLTDDISANVSV 118
LAR+ T + + + R S LTEEH R ++ NR R+++ R ++I N V
Sbjct: 1859 LARYSTSLGNAIHGRDDSPLTEEHIVREVLSNRQRYVDERYKEEIKMNALV 1909
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,869,315
Number of Sequences: 1657284
Number of extensions: 16130585
Number of successful extensions: 41501
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 39794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41479
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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