Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0717.Seq
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 30 2.3
SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2) 29 3.0
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 29 3.0
SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 29 5.3
SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5) 29 5.3
SB_15223| Best HMM Match : ASC (HMM E-Value=1.8e-19) 29 5.3
SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045) 28 7.0
SB_41737| Best HMM Match : zf-B_box (HMM E-Value=2.3e-10) 28 7.0
SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +1
Query: 403 SWIVARRTSAKAFAKGVFINQERKLEVRRRLDTALV 510
SWI RRT+AKAFAK VFINQERKLE RRR DT LV
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLV 39
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 418 RRTSAKAFAKGVFINQERKLEVRRRLDTALV 510
RRT+AKAFAK VFINQERKLE RRR DT LV
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLV 39
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 418 RRTSAKAFAKGVFINQERKLEVRRRLDTALV 510
RRT+AKAFAK VFINQERKLE RRR DT LV
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLV 39
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 418 RRTSAKAFAKGVFINQERKLEVRRRLDTALV 510
RRT+AKAFAK VFINQERKLE RRR DT LV
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLV 39
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 418 RRTSAKAFAKGVFINQERKLEVRRRLDTALV 510
RRT+AKAFAK VFINQERKLE RRR DT LV
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLV 41
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 421 RTSAKAFAKGVFINQERKLEVRRRLDTALV 510
RT+AKAFAK VFINQERKLE RRR DT LV
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLV 58
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 421 RTSAKAFAKGVFINQERKLEVRRRLDT 501
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +1
Query: 418 RRTS-AKAFAKGVFINQERKLEVRRRLDTALV 510
R+T+ ++ AK VFINQERKLE RRR DT LV
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDTVLV 39
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 396 VKFLDRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSLTVN 521
VKFLD RKTN ESI + F K+ + LT+N
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +3
Query: 396 VKFLDRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSLTVN 521
VKFLD RKTN ESICQ CF K+ + LT+N
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +3
Query: 396 VKFLDRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSLTVN 521
VKFLD RKTN ESICQ CF K+ + LT+N
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +1
Query: 418 RRTS-AKAFAKGVFINQERKLEVRRRLDTALV 510
R+T+ ++ + VFINQERKLE RRR DT LV
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDTVLV 39
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 396 VKFLDRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSLTVN 521
VKFLD RKTN ESICQ F K+ + LT+N
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKLEDRRRSDTVLVLTIN 43
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 34.7 bits (76), Expect = 0.081
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 418 RRTS-AKAFAKGVFINQERKLEVRRRLDTALV 510
R+T+ ++ + FINQERKLE RRR DT LV
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLV 39
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 399 KFLDRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSLTVN 521
+ L RKTN ESICQ CF K+ + LT+N
Sbjct: 3 EILGFRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 728 CQSFRCPGLVRFPVLSQIKPQ-APLLVVPFRQFL*VSALQPYSPRSPKSLVSRKLPAEPL 552
C S +CPG V +P + P+ AP P R++ L SPRSP++ SR P E +
Sbjct: 343 CASGKCPGCVYYPGMVPRSPRDAP--KEP-REYASPPPLPSKSPRSPRTSESRSPPREEM 399
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 607 TPPGV-QNLWFPGSCPPSHCSNVGGSLDDIFTVRLGRY 497
+P GV +N W PGS S+C++ GG + ++ + +Y
Sbjct: 174 SPYGVDENSWSPGSSQSSNCTSPGGHSPTLNSLHMDQY 211
>SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2)
Length = 111
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 88 YIKVVAVKKLVVGFRDGTVGPP 109
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 44 YIKVVAVKKLVVGFRDGTVGPP 65
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 89 YIKVVAVKKLVVGFRDGTVGPP 110
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 17 YIKVVAVKKLVVGFRDGTVGPP 38
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 81 YIKVVAVKKLVVGFRDGTVGPP 102
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 34 YIKVVAVKKLVVGFRDGTVGPP 55
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 40 YTKIVAVKKLVVAFVRRAVGAP 105
Y K+VAVKKLVV F VG P
Sbjct: 21 YIKVVAVKKLVVGFRDGTVGPP 42
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 717 PVSGPGEISRVESN*AAGSTPGGALPSIPLSFSFAT 610
P S PG S A STPG A+ SIP + S +T
Sbjct: 1015 PSSTPGAASSTTPGAAPSSTPGAAMSSIPGATSSST 1050
>SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1093
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 355 NHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSPLWHSNLFKVKLSAHLD--THRRAPR*DF 182
+ Y+ +L K+E R + IP +S+ ++P W +F H + T++ +
Sbjct: 765 SRYITILSEEKVEKRKHDRIPENTKTSTGYTPNWTEEIFIFDKLQHTNPVTYKIKDLNNE 824
Query: 181 DIEPAFF 161
DI+ +F+
Sbjct: 825 DIQGSFY 831
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 28.7 bits (61), Expect = 5.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 310 SYSIIPCTKYSSSIFSPLWH 251
+Y IPCT Y+ +++S WH
Sbjct: 127 TYRGIPCTNYTENLWSRFWH 146
>SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5)
Length = 203
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 78 CNYELFNRNNFSIRYWSWNYRGCWH 4
C + RN +RYW W R C H
Sbjct: 91 CEVTVIARNILPVRYWIWLSRKCGH 115
>SB_15223| Best HMM Match : ASC (HMM E-Value=1.8e-19)
Length = 605
Score = 28.7 bits (61), Expect = 5.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 310 SYSIIPCTKYSSSIFSPLWH 251
+Y IPCT Y+ +++S WH
Sbjct: 58 TYRGIPCTNYTENLWSRFWH 77
>SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045)
Length = 1050
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -2
Query: 201 EHRDRILILNRRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWN 22
E RD L NR+ ++ + +V P + S + + + FSI YW W+
Sbjct: 453 ELRDTYLTENRQLNMYDYRENDGIDCAVWPHLYPYHSWSRRSAATSLDTKTFSIEYWRWH 512
Query: 21 YR 16
+R
Sbjct: 513 HR 514
>SB_41737| Best HMM Match : zf-B_box (HMM E-Value=2.3e-10)
Length = 511
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = -1
Query: 301 IIPCTKYSSSIFSPLWHSNLFKVKLSAHLDTHRRAPR*DFD--IEPAFFRTPAHRRYLRK 128
I+ K +S + + + F K HLD ++RA R D D I+ R YLR
Sbjct: 54 ILERAKKVTSKLTDIEQAMAFVEKAQQHLDENKRAARRDLDQFIDKQIGALEKMRSYLRG 113
Query: 127 RVSITADAVHRQRGAQMQ 74
V +Q AQ +
Sbjct: 114 EVESACQKQEKQLTAQRE 131
>SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 335 QNSEVMINRDNWGHSY-CDVRGEILGSSQDEHQRKHLP 445
Q EV +++ GH Y C GE++ S++D H+ +P
Sbjct: 7 QCKEVESSKEILGHPYVCAFAGEVIQSTEDVHKPSWIP 44
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 616 CNHTPPGVQNLWFPGSCPPSHCSNVGGSLDD 524
C+ PG + PGSC P +C N+ GSL D
Sbjct: 854 CDRCMPG--SYGGPGSCKPCNC-NMAGSLSD 881
>SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 117 SPRMRCTDSAAHKCNYELFNRNNFSIRYW-SWNY 19
S R+RCT S + KC + + F W S+NY
Sbjct: 147 SYRLRCTSSTSWKCRLTSISESYFKGNNWFSYNY 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,186,394
Number of Sequences: 59808
Number of extensions: 501184
Number of successful extensions: 1287
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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