Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0717.Seq
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U06469-1|AAA53215.1|  524|Homo sapiens HEAAC1 protein.                 30   7.7  
AL157783-7|CAI12143.1|  296|Homo sapiens cAMP responsive element...    30   7.7  

>U06469-1|AAA53215.1|  524|Homo sapiens HEAAC1 protein.
          Length = 524

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = +3

Query: 261 GLKMLLEYFVHGIIEYDLGSILLVFRTPXXXXXXXXXXXXXXXXEVK----FLDRRKTNI 428
           GL+ +L YF   +I   LG +L+V   P                EV      LD  +   
Sbjct: 91  GLRAVLYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDAMLDLIRNMF 150

Query: 429 SESICQRCFHQSRTK 473
            E++ Q CF Q +TK
Sbjct: 151 PENLVQACFQQYKTK 165


>AL157783-7|CAI12143.1|  296|Homo sapiens cAMP responsive element
           modulator protein.
          Length = 296

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 480 GSKAIRYRPSLTVNMSSSDPP--TLLQWLGGQLPGNQRFWTPGGVWLQS*NLKELTEGH 650
           GS  ++   +LT+  S + PP  T++Q+      G Q+F+ PG   +      EL   H
Sbjct: 184 GSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQDEETELAPSH 242


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,354,184
Number of Sequences: 237096
Number of extensions: 2526125
Number of successful extensions: 5769
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5762
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)