Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0717.Seq
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 4.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 4.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 4.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 4.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 4.0
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.0
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 5.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 7.1
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -2
Query: 207 TEEHRDRILILNRRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 28
T + R R R E ++ +S N S ++ + NY NN+ Y++
Sbjct: 295 TSKERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYN 354
Query: 27 WNY 19
NY
Sbjct: 355 INY 357
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 171 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 19
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 171 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 19
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 171 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 19
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 171 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 19
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 171 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 19
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -1
Query: 388 VAIRMPPVIPINH-----YLGVLKTN 326
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -1
Query: 388 VAIRMPPVIPINH-----YLGVLKTN 326
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -1
Query: 388 VAIRMPPVIPINH-----YLGVLKTN 326
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 370 PVIPINHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSPLWHS 248
P +N KT I R++ ++ YS+S F+P+ +S
Sbjct: 287 PFFCVNIVTSYCKTC-ISGRAFQVLTWLGYSNSAFNPIIYS 326
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 411 RRKTNISESICQRCFHQ 461
RR+ N++E++C F Q
Sbjct: 966 RRRLNVNETVCSDYFSQ 982
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 7.1
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -2
Query: 204 EEHRDRILILNRRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSW 25
E RDR R E ++ +S N ++ ++ + NY N NN+ Y++
Sbjct: 65 ERSRDRTE--RERSREPKIISSLS-NKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNI 121
Query: 24 NY 19
NY
Sbjct: 122 NY 123
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,034
Number of Sequences: 438
Number of extensions: 5133
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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