Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0715.Seq
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.6  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   8.0  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   8.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.0  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 204 EAFRHNPADGSFAPPAAGRV 263
           E +RH P +G++A  ++GRV
Sbjct: 35  ELYRHPPNNGNWAVDSSGRV 54


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = -3

Query: 741 SGSRTLP----GGEFDWGGTSVKE 682
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +2

Query: 716  PPGSVLEP-DHAGVLNG 763
            PPGS+L+P D A V+ G
Sbjct: 1092 PPGSILDPSDGAAVVGG 1108


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 695 VPPQSNSPPGSVLEPD 742
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,316
Number of Sequences: 2352
Number of extensions: 16996
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)