Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0715.Seq
(776 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 55 3e-07
AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens ... 31 3.5
BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marke... 31 6.1
BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marke... 31 6.1
BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosia... 31 6.1
AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein prot... 31 6.1
AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marke... 31 6.1
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 8.1
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 8.1
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 433 MIGRADIEGSKSNVAMNAWLPQASYPVVTF 522
MIGRADIEGSKS+VAMNAW PQASYP F
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30
>AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ14384 fis, clone HEMBA1002150. ).
Length = 433
Score = 31.5 bits (68), Expect = 3.5
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +1
Query: 139 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 312
P L AP+ Y + L RP S P + ++H P+ + + +P+++++
Sbjct: 107 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIVANY 165
Query: 313 TIATTSHQ*GKTNLSHDGLNPAHVP 387
+++Q G ++SH PAH P
Sbjct: 166 PDLPSAYQPGILSVSHSAQPPAHQP 190
>BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 30.7 bits (66), Expect = 6.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 139 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 312
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 313 TIATTSHQ*GKTNLSHDGLNPAHVP 387
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 30.7 bits (66), Expect = 6.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 139 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 312
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 313 TIATTSHQ*GKTNLSHDGLNPAHVP 387
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosialin
protein.
Length = 757
Score = 30.7 bits (66), Expect = 6.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 139 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 312
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 313 TIATTSHQ*GKTNLSHDGLNPAHVP 387
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein
protein.
Length = 757
Score = 30.7 bits (66), Expect = 6.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 139 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 312
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 313 TIATTSHQ*GKTNLSHDGLNPAHVP 387
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marker 1
precursor protein.
Length = 757
Score = 30.7 bits (66), Expect = 6.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 139 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 312
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 313 TIATTSHQ*GKTNLSHDGLNPAHVP 387
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 210 TPLRPKPA*PNPARICSLWSPESRE 136
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 210 TPLRPKPA*PNPARICSLWSPESRE 136
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,909,330
Number of Sequences: 237096
Number of extensions: 2694519
Number of successful extensions: 6796
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6792
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -