Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0713.Seq
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 36 0.034
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 34 0.10
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 33 0.18
SB_23756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 32 0.42
SB_49879| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 31 0.73
SB_52254| Best HMM Match : ANF_receptor (HMM E-Value=7.84727e-44) 29 2.2
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_939| Best HMM Match : PH (HMM E-Value=6.9e-14) 29 3.9
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 28 5.1
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 28 5.1
SB_56377| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 28 5.1
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 5.1
SB_37178| Best HMM Match : fn3 (HMM E-Value=4.7e-08) 28 6.8
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 35.5 bits (78), Expect = 0.034
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Frame = +2
Query: 83 EEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQS--G 256
E+F E++ + + R K + Q A R K+ E++SLKA LQE++K S
Sbjct: 863 EKFREEETQKLRREKKVFEKYQKAA-RANPDKKEREEIESLKAQLSELQEEMKRRDSRWS 921
Query: 257 SAHARLSSGPRRRDTRPWSKPHE-GMHVRNAINCWRKSNRRSGQ*HC*NERRQNRPRNKT 433
+A AR + + + E + + ++ WR ++G N ++ RPR +
Sbjct: 922 AASARYRNRIEALEEQNKELQEEVKLLEKYRLDLWRTEQDKAGNDE--NSGKETRPRKEK 979
Query: 434 IRRREWSAEPMNSP 475
R+ +A P P
Sbjct: 980 QRK---TARPSEQP 990
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +2
Query: 80 REEFLEKQLRT----IARPHKQTD-DAQSACGRLTDV-KRLTTEVQSLKAAYKGLQEKLK 241
R EFLEKQL+T + Q D DAQS L + K LT E Q L+ K ++ K+K
Sbjct: 1162 RSEFLEKQLKTAQASLQEEISQADIDAQSTTLELAEANKILTDEKQKLEQEMKAMEGKIK 1221
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 92 LEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLK-AAYKGLQEKLKVAQSGSAHA 268
LEK+ + K+ + A+ + ++++ T +++ + +A K +E +K Q G
Sbjct: 1105 LEKKKMKLEEDRKRNEIAKQKLASIRKIEKILTFIETARWSAIKRAKEHVKSLQKGGLEI 1164
Query: 269 RLSSGPRRRDTRPWSKPHEGMHVRNAINCWRKSNRRS 379
+ +RD E RN IN W K +R S
Sbjct: 1165 K------KRDLHESENEIEKRRRRNNINIWLKGSRNS 1195
>SB_23756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 594 IPPN-LRLKEPPCKTFLSCVEYPFLDLHDYLFFSLINTQFPGEFIGSALHSLRLIVL 427
+PPN LR EP C F C+E L+L+ + SL ++ E + LR + L
Sbjct: 151 LPPNVLRKNEPLCAIFKGCLELRVLNLNYAKYLSLTTSELALEVLAENCKRLRQLKL 207
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +2
Query: 41 DSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRL--------TDVKRLTTEV 196
D+ ++ LKT+ + EE + R + H++ DA+ + L VK L E
Sbjct: 133 DAEIKALKTQLKMAEETRDSSRRDLIDAHRKIRDAEDSKETLRKENLHVKRQVKDLEMEK 192
Query: 197 QSLKAAYKGLQEKLKVAQSGSAHARLS 277
QSL+ + L+EK+K+ ++ + + +
Sbjct: 193 QSLEKSVSDLREKVKLVENEKSELKFA 219
>SB_49879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 171 SVSLPQADCASSVCLWGLAMVLNCFSKNSSRYLC 70
S S+P A CASS CL G A V +C ++ + LC
Sbjct: 490 STSIPDA-CASSPCLHGGACVRSCHDEDEYQCLC 522
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 31.1 bits (67), Expect = 0.73
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = +2
Query: 131 QTDDAQSACGRLTDVKRLTTEVQSLKAAY-KGLQEKLKVAQSGSAHARLSSGPRRRDTRP 307
Q D Q + KR + Q KAA + K K ++ + R +S ++
Sbjct: 61 QDQDKQDQDKQAASRKRSKPQDQDKKAARPRQASRKTKTSKPQATRPRQASSKKKTSKNK 120
Query: 308 WSKPHEGMHVRNAINCWRKSNRRSGQ*HC*NERRQNRP-RNKTIRRRE 448
KP E A RK R+ Q N+ +N+P +NKT + ++
Sbjct: 121 PGKPQEKDKQEQARQAARKRQARTSQASRKNKPSKNKPSKNKTTKPQD 168
>SB_52254| Best HMM Match : ANF_receptor (HMM E-Value=7.84727e-44)
Length = 933
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 360 GNQIEGADNSTAETRGGKIDRATKRSG 440
GN++ G D + E+R GK+ R K G
Sbjct: 685 GNEVRGVDTNCHESRNGKVARKDKERG 711
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 275 SSGPRRRDT-RPWSKPHEGMHVRN 343
S G R + +PWSKPHE H +N
Sbjct: 455 SKGSRASSSSKPWSKPHESDHSQN 478
>SB_939| Best HMM Match : PH (HMM E-Value=6.9e-14)
Length = 1030
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 364 IKSKERTIALLKREAAKSTAQQNDQAQRMEC 456
+KS ERTIA KREA S + ++ + EC
Sbjct: 988 VKSLERTIANGKREARPSRMEVGEKLPKKEC 1018
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 VFKKNLRSHNRGVRTRG*AQGPGGETRG-LGASRTKG 329
+ K+N +S +RG R RG ++GPG G +G RT+G
Sbjct: 149 IIKQNKKS-SRGGRGRGGSRGPGRRGGGPVGRGRTRG 184
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +2
Query: 101 QLRTIARPHKQTDDAQSACGRLTDVKRL-TTEVQSLKAAYKGLQEKLKVAQSG--SAHAR 271
Q R I H + A + +++ +RL +EVQ ++ Y G+++ L++ ++ AH +
Sbjct: 566 QARGIHGEHSVSTGADAGVFDISNKRRLGLSEVQCVQDMYNGVKKLLEIERAAIEEAHLK 625
Query: 272 LSSGPRRRDTRPWSKPHEGMHVRNAINCWRKSNRRSGQ*HC*N 400
++ + + K + V N++ +K++R +G C N
Sbjct: 626 FPEDLKKPEVKSLLKKYLTEDVFNSLK-EKKTSRGAGLYDCIN 667
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 28.3 bits (60), Expect = 5.1
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 17 VRALKARYDSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEV 196
V +LK R + + NLK R+ + + I R + Q G D+ R ++ V
Sbjct: 29 VVSLKQRIEGYI-NLKATQVCRKHYF--RTNGIIRVRVLQQNEQPKYG--VDLCRKSSAV 83
Query: 197 QSLKAAYKGLQEKLKVAQSGSAHARLSSG-PRRRDTRPWSKPHEGMH 334
AY+GL EK+K Q + + S P+ RD + H H
Sbjct: 84 HFAPTAYRGLMEKMKQKQRERSRSNYRSDIPKPRDNHDKTFLHHKHH 130
>SB_56377| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 393
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 290 RRDTRPWSKPHEGMHVRNAINCWRKSNRRSGQ*HC*NERRQNRPRNK 430
R PW KP E N RKS + + C N R + RN+
Sbjct: 20 RNQQEPWKKPREKKIELQRENLARKSKKTTNSVTCRNGRERATSRNQ 66
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 183 NLLTSVSLPQADCASSVCLWG 121
+ L V+ P+ D AS VCLWG
Sbjct: 307 SFLDEVASPRRDTASPVCLWG 327
>SB_37178| Best HMM Match : fn3 (HMM E-Value=4.7e-08)
Length = 961
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 2 HRAETVRALKARYDSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKR 181
+R + +++ R D + ++ R R E E QL+T+ R + TDV+
Sbjct: 229 NRKKWESSMQQRRDKEVEYMEAR-RNRVEDYENQLQTL-RIQDAEEYNMVKIKLETDVQI 286
Query: 182 LTTEVQSLKAAYKGLQEKLK 241
L ++Q +KA Y+ QEKL+
Sbjct: 287 LEQQLQQMKATYQLNQEKLE 306
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 47 ALRNLKTEHR*REEFLE--KQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYK 220
AL N + R E +E K L + + + ++ + S+C ++ TTE LKA Y
Sbjct: 149 ALENNNHQKRQIEGQIERIKNLEGVVQQNGRSSSSSSSCHDESENTASTTEFADLKAKYH 208
Query: 221 GLQE-KLKVAQSGS 259
+E +L+V Q S
Sbjct: 209 TERELRLRVQQQNS 222
>SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 290 RRDTRPWSKPHEGMHVRNAINCWRKSNRRSGQ*HC*NERRQNRPRNK 430
R W KP E N RKSN+ + C N R + RN+
Sbjct: 143 RNQQESWKKPREKKIELQRENLARKSNKTTNSVTCRNGRERATSRNQ 189
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 334 RAQCHKLLEEIKSKERTIALLKREAAKSTAQQNDQAQRMECG 459
+++ +LLEE+K K+R +R + TAQQ ++ +R + G
Sbjct: 900 KSELTQLLEEVKEKQRR---KQRGEKEETAQQKERRERRKYG 938
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -3
Query: 379 APSI*FPPAVYGIAHVHPFVRLAPRPRVSPPGP*AQPRVRTP 254
AP FPP G H AP PRV PPG PRV P
Sbjct: 436 APHPRFPPP--GAPHPRVPPPGAPHPRVPPPGA-PHPRVPPP 474
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,747,474
Number of Sequences: 59808
Number of extensions: 364342
Number of successful extensions: 1052
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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