BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0713.Seq
(609 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p pro... 31 0.93
AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V pro... 31 0.93
AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,... 31 0.93
AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,... 31 0.93
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro... 31 1.6
AY069692-1|AAL39837.1| 302|Drosophila melanogaster LD46418p pro... 31 1.6
AJ252068-1|CAB64383.1| 290|Drosophila melanogaster CAAX-proteas... 31 1.6
AE014296-968|AAF50770.3| 302|Drosophila melanogaster CG4852-PA ... 31 1.6
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA... 31 1.6
U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding p... 30 2.8
AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-P... 30 2.8
BT029924-1|ABM92798.1| 377|Drosophila melanogaster IP06413p pro... 29 5.0
AE014297-820|AAF54291.2| 372|Drosophila melanogaster CG11776-PA... 29 5.0
Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class u... 29 6.6
AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro... 29 6.6
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P... 29 6.6
AE014298-1698|AAF48101.1| 1013|Drosophila melanogaster CG15740-P... 29 6.6
>BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p protein.
Length = 1401
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/82 (23%), Positives = 41/82 (50%)
Frame = +2
Query: 50 LRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQ 229
LR++ E + + + L++Q ++ HK T+D+ + ++L +E L+ + K
Sbjct: 1161 LRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIK--- 1217
Query: 230 EKLKVAQSGSAHARLSSGPRRR 295
+++ + + HA L RRR
Sbjct: 1218 HGVEINELNAQHAALQEEVRRR 1239
>AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V protein.
Length = 1792
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/82 (23%), Positives = 41/82 (50%)
Frame = +2
Query: 50 LRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQ 229
LR++ E + + + L++Q ++ HK T+D+ + ++L +E L+ + K
Sbjct: 1153 LRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIK--- 1209
Query: 230 EKLKVAQSGSAHARLSSGPRRR 295
+++ + + HA L RRR
Sbjct: 1210 HGVEINELNAQHAALQEEVRRR 1231
>AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,
isoform A protein.
Length = 1792
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/82 (23%), Positives = 41/82 (50%)
Frame = +2
Query: 50 LRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQ 229
LR++ E + + + L++Q ++ HK T+D+ + ++L +E L+ + K
Sbjct: 1153 LRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIK--- 1209
Query: 230 EKLKVAQSGSAHARLSSGPRRR 295
+++ + + HA L RRR
Sbjct: 1210 HGVEINELNAQHAALQEEVRRR 1231
>AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,
isoform C protein.
Length = 1800
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/82 (23%), Positives = 41/82 (50%)
Frame = +2
Query: 50 LRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQ 229
LR++ E + + + L++Q ++ HK T+D+ + ++L +E L+ + K
Sbjct: 1161 LRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIK--- 1217
Query: 230 EKLKVAQSGSAHARLSSGPRRR 295
+++ + + HA L RRR
Sbjct: 1218 HGVEINELNAQHAALQEEVRRR 1239
>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p protein.
Length = 1489
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +2
Query: 5 RAETVRALKARYDSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRL 184
+A R LK + D L L+ R +E+ L+ Q A+ Q ++++ + L
Sbjct: 972 KANLDRELKEQ-DQQLSELRERQREQEQQLKDQAERCAKLKAQNSESETQLQ--ATISNL 1028
Query: 185 TTEVQSLKAAYKGLQEKLKVAQS 253
++ + K +G+QEKL+ S
Sbjct: 1029 REQLDAYKQTEQGIQEKLQATNS 1051
>AY069692-1|AAL39837.1| 302|Drosophila melanogaster LD46418p
protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 469 IHWLRTPFSAP--DRFVARSILPPLVSAVLLSAPSI*FPPAVYGIAHVH 329
I W+R AP + FV R+ + PL+ ++ P +G+AH+H
Sbjct: 147 IIWVRNHVIAPLSEEFVFRACMMPLILQSFSPLVAVFITPLFFGVAHLH 195
>AJ252068-1|CAB64383.1| 290|Drosophila melanogaster CAAX-protease
protein.
Length = 290
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 469 IHWLRTPFSAP--DRFVARSILPPLVSAVLLSAPSI*FPPAVYGIAHVH 329
I W+R AP + FV R+ + PL+ ++ P +G+AH+H
Sbjct: 135 IIWVRNHVIAPLSEEFVFRACMMPLILQSFSPLVAVFITPLFFGVAHLH 183
>AE014296-968|AAF50770.3| 302|Drosophila melanogaster CG4852-PA
protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 469 IHWLRTPFSAP--DRFVARSILPPLVSAVLLSAPSI*FPPAVYGIAHVH 329
I W+R AP + FV R+ + PL+ ++ P +G+AH+H
Sbjct: 147 IIWVRNHVIAPLSEEFVFRACMMPLILQSFSPLVAVFITPLFFGVAHLH 195
>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
protein.
Length = 1489
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +2
Query: 5 RAETVRALKARYDSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRL 184
+A R LK + D L L+ R +E+ L+ Q A+ Q ++++ + L
Sbjct: 972 KANLDRELKEQ-DQQLSELRERQREQEQQLKDQAERCAKLKAQNSESETQLQ--ATISNL 1028
Query: 185 TTEVQSLKAAYKGLQEKLKVAQS 253
++ + K +G+QEKL+ S
Sbjct: 1029 REQLDAYKQTEQGIQEKLQATNS 1051
>U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding
protein homolog protein.
Length = 3190
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +3
Query: 276 AQGPGGETRGLGASRTKGCTCAMP*TAGGNQIEGADNSTAETRGGKIDRATKRSGAENGV 455
AQGPG T G+G G + +Q+ GA GG D + SGA N +
Sbjct: 79 AQGPGSGTGGVGVGVNVGVGGVVGVGVVPSQMNGAGGGNGSGTGGD-DGSGNGSGAGNRI 137
Query: 456 RSQ*IHQE 479
SQ HQ+
Sbjct: 138 -SQMQHQQ 144
>AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-PB
protein.
Length = 3276
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +3
Query: 276 AQGPGGETRGLGASRTKGCTCAMP*TAGGNQIEGADNSTAETRGGKIDRATKRSGAENGV 455
AQGPG T G+G G + +Q+ GA GG D + SGA N +
Sbjct: 79 AQGPGSGTGGVGVGVNVGVGGVVGVGVVPSQMNGAGGGNGSGTGGD-DGSGNGSGAGNRI 137
Query: 456 RSQ*IHQE 479
SQ HQ+
Sbjct: 138 -SQMQHQQ 144
>BT029924-1|ABM92798.1| 377|Drosophila melanogaster IP06413p
protein.
Length = 377
Score = 29.1 bits (62), Expect = 5.0
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +2
Query: 17 VRALKARYDSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLT-------DV 175
VRAL+A+ D+ R K+E + + LE ++ +S+ +T ++
Sbjct: 189 VRALRAQNDADSRRWKSEVKKLQHTLEMAKKSNGIKKAIESGPESSGAHVTADGLINYEI 248
Query: 176 KRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRRDTRPWSKP 319
+RLT E+ LK A + +EK ++ + + + G R+D P
Sbjct: 249 QRLTNEIAVLKEANRNKEEKTQLEEIKTKERNI--GQLRKDLLALQSP 294
>AE014297-820|AAF54291.2| 372|Drosophila melanogaster CG11776-PA
protein.
Length = 372
Score = 29.1 bits (62), Expect = 5.0
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +2
Query: 17 VRALKARYDSALRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLT-------DV 175
VRAL+A+ D+ R K+E + + LE ++ +S+ +T ++
Sbjct: 189 VRALRAQNDADSRRWKSEVKKLQHTLEMAKKSNGIKKAIESGPESSGAHVTADGLINYEI 248
Query: 176 KRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRRDTRPWSKP 319
+RLT E+ LK A + +EK ++ + + + G R+D P
Sbjct: 249 QRLTNEIAVLKEANRNKEEKTQLEEIKTKERNI--GQLRKDLLALQSP 294
>Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class
unconventional myosin protein.
Length = 1745
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/82 (21%), Positives = 39/82 (47%)
Frame = +2
Query: 50 LRNLKTEHR*REEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQ 229
LR++ E + + + L++Q ++ HK T+D+ + ++L L+ + K
Sbjct: 1106 LRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRRRYDQLRTSIK--- 1162
Query: 230 EKLKVAQSGSAHARLSSGPRRR 295
+++ + + HA L RRR
Sbjct: 1163 HGVEINELNAQHAALQEEVRRR 1184
>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p
protein.
Length = 1398
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 328 DARAQCHKLLEEIKSKERTIALLKREAAKSTAQQNDQ 438
+ + Q +L + + K+R IA L+RE AKS +Q Q
Sbjct: 60 ETQEQKEQLDKRCEEKDREIAALRRELAKSKQKQESQ 96
>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
isoform A protein.
Length = 1398
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 328 DARAQCHKLLEEIKSKERTIALLKREAAKSTAQQNDQ 438
+ + Q +L + + K+R IA L+RE AKS +Q Q
Sbjct: 60 ETQEQKEQLDKRCEEKDREIAALRRELAKSKQKQESQ 96
>AE014298-1698|AAF48101.1| 1013|Drosophila melanogaster CG15740-PA
protein.
Length = 1013
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/55 (38%), Positives = 25/55 (45%)
Frame = -3
Query: 454 TPFSAPDRFVARSILPPLVSAVLLSAPSI*FPPAVYGIAHVHPFVRLAPRPRVSP 290
T S +F A + LPP +A APS PA IA P V AP P +P
Sbjct: 604 TAGSYQQQFTAPAYLPPTATA---PAPSPVAAPAPVSIAAPAPLVAPAPAPAPAP 655
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,716,238
Number of Sequences: 53049
Number of extensions: 536813
Number of successful extensions: 1998
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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