Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0713.Seq
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038619-1|AAB92076.2| 468|Caenorhabditis elegans Hypothetical ... 33 0.21
AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical ... 30 1.5
U46671-2|AAA85748.1| 205|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell death-re... 29 2.0
AC024791-9|AAF60653.1| 382|Caenorhabditis elegans Cell-death-re... 29 2.0
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 29 2.6
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 29 2.6
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 2.6
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 29 2.6
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 29 3.4
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 28 4.5
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 28 4.5
Z81506-4|CAB04131.1| 191|Caenorhabditis elegans Hypothetical pr... 28 6.0
AC084154-7|AAO91685.1| 304|Caenorhabditis elegans F-box a prote... 28 6.0
U40948-3|AAA81729.1| 307|Caenorhabditis elegans Hypothetical pr... 27 7.9
>AF038619-1|AAB92076.2| 468|Caenorhabditis elegans Hypothetical
protein F56A11.4 protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.21
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -1
Query: 546 SCVEYPFLDLHDYLFFSLINTQFPGEF 466
+C EYP + L+ ++FF ++ +FPGE+
Sbjct: 3 NCFEYPCVQLYVFIFFGELSGRFPGEW 29
>AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical
protein Y15E3A.4 protein.
Length = 469
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 484 AVSW*IHWLRTPFSAPDRFVARSILPPLVSAVLLSAPSI*F 362
A +W HW T F A F A ++ L +AV+ A + F
Sbjct: 83 AAAWPFHWFYTQFGARSVFFAAGVVSTLSTAVMPLAAEVHF 123
>U46671-2|AAA85748.1| 205|Caenorhabditis elegans Hypothetical
protein C14E2.3 protein.
Length = 205
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 609 RRARTIPPNLRLKEPPCKTFLSCVEYPFLDLHDYLFFSLINTQ 481
++ R I P PP K SC P + +HD L FS+I+ Q
Sbjct: 41 KQIRVIVPTRIAPPPPIKE-ASCPNLPQIRIHDPLVFSVISEQ 82
>AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell
death-related nuclease 1 protein.
Length = 382
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 DARAQCHKLLEEIKSKE--RTIALLKREAAKSTAQQNDQAQRM 450
+ RA+ K L E K K + +R K T QQND+A+R+
Sbjct: 102 ERRAEAEKALTEAKEKGDVKEAEKFERRLVKVTKQQNDEAKRL 144
>AC024791-9|AAF60653.1| 382|Caenorhabditis elegans
Cell-death-related nuclease protein1 protein.
Length = 382
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 DARAQCHKLLEEIKSKE--RTIALLKREAAKSTAQQNDQAQRM 450
+ RA+ K L E K K + +R K T QQND+A+R+
Sbjct: 102 ERRAEAEKALTEAKEKGDVKEAEKFERRLVKVTKQQNDEAKRL 144
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 294 ETRGLGASRTKGCTCAMP*TAGGNQIEGADNSTAETRGGKIDRATKRSGAEN 449
E GLG R KG A+ GG E AD A T+G K+ K + + N
Sbjct: 255 ELEGLGLERLKGALMAIGLKCGGTLKERADRLFA-TKGHKLSDLEKAAMSSN 305
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 749 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 808
Query: 296 DTRPWS 313
T P S
Sbjct: 809 TTAPLS 814
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical protein
C06C3.1c protein.
Length = 1124
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 905 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 964
Query: 296 DTRPWS 313
T P S
Sbjct: 965 TTAPLS 970
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 800 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 859
Query: 296 DTRPWS 313
T P S
Sbjct: 860 TTAPLS 865
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 797 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 856
Query: 296 DTRPWS 313
T P S
Sbjct: 857 TTAPLS 862
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 749 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 808
Query: 296 DTRPWS 313
T P S
Sbjct: 809 TTAPLS 814
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 905 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 964
Query: 296 DTRPWS 313
T P S
Sbjct: 965 TTAPLS 970
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 800 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 859
Query: 296 DTRPWS 313
T P S
Sbjct: 860 TTAPLS 865
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 797 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 856
Query: 296 DTRPWS 313
T P S
Sbjct: 857 TTAPLS 862
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 116 ARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKVAQSGSAHARLSSGPRRR 295
A+P+ +A T R + + QSL A G+ ++ + A LSS P R
Sbjct: 797 AQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIVAGLSSAPSMR 856
Query: 296 DTRPWS 313
T P S
Sbjct: 857 TTAPLS 862
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 358 EEIKSKERTIALLKREAAKSTAQQNDQAQRME 453
E++KS+ +A+LK + + QQ QAQ+++
Sbjct: 213 EKVKSQSEAMAMLKEAISAQSQQQTQQAQQVQ 244
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 328 DARAQCHKLLEEIKSKERTIALLKREAAKSTAQQNDQAQRME 453
+ R + KL EE+KSKE I ++ E T + + +R+E
Sbjct: 39 EERGKVDKLTEELKSKEAVIRRIQAENESLTFRNDQLVRRVE 80
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 248 QSGSAHARLSSGPRRRDTRPWSKPHEGMHVRNAINCWRK 364
+S AHAR P R D +SKP EG + + WRK
Sbjct: 569 ESRGAHAR-DDFPDRLDELDYSKPLEGQTKKELKDHWRK 606
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 248 QSGSAHARLSSGPRRRDTRPWSKPHEGMHVRNAINCWRK 364
+S AHAR P R D +SKP EG + + WRK
Sbjct: 569 ESRGAHAR-DDFPDRLDELDYSKPLEGQTKKELKDHWRK 606
>Z81506-4|CAB04131.1| 191|Caenorhabditis elegans Hypothetical
protein F16H6.5 protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 405 GGKIDRATKRSGAENGVRSQ*IHQETAC*SGKRKDNREDLKTDIQHRKETFYREAP 572
GG++ A +GA + V+ + + +E KD DLK + + ++F ++ P
Sbjct: 124 GGRVKCAGTETGARSNVKCEEVAKEVNEYIDSNKDKFGDLKVESLGKADSFMKQKP 179
>AC084154-7|AAO91685.1| 304|Caenorhabditis elegans F-box a protein
protein 74 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 155 CGRLTDVKRLTTEVQSLKAAYKGLQEKLKV 244
C ++ KRLT + L YKGL E ++
Sbjct: 53 CFKICSTKRLTISLNGLDILYKGLNEDCRI 82
>U40948-3|AAA81729.1| 307|Caenorhabditis elegans Hypothetical
protein F55D10.4 protein.
Length = 307
Score = 27.5 bits (58), Expect = 7.9
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -1
Query: 465 IGSALHSLRLIVLLRGRFCRLSFQQCYCPLLRFDFLQQFMALRTCIPSCGLLQGRVSRRL 286
IGS + L++L RLS L F+ L I L+Q +S+RL
Sbjct: 137 IGSTWLLVTLLLLSDFFLIRLSRSFVLAVPFHLALLSVFLVLNLIIHPLNLIQLIISQRL 196
Query: 285 GP-ELSRACAL-PDCATLS 235
P E S+ L DCAT S
Sbjct: 197 NPEENSQTVRLKKDCATAS 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,809,692
Number of Sequences: 27780
Number of extensions: 259635
Number of successful extensions: 818
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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