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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0712.Seq
         (571 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732...    33   0.12 
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879...    32   0.28 
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    30   1.5  
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222...    29   2.6  
10_06_0084 - 10477880-10477897,10477940-10478002,10479523-104795...    29   3.4  
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367...    29   3.4  
06_01_1164 + 9921555-9922661                                           29   3.4  
11_01_0073 - 572794-572883,573188-573393,573491-573581                 28   4.6  
07_03_1436 - 26543846-26546806                                         28   4.6  
02_05_1282 + 35442730-35442841,35443040-35443105,35443195-354432...    28   4.6  
12_01_0074 - 615794-615883,616186-616391,616524-616614                 28   6.0  
06_01_0978 + 7595641-7595843,7595952-7596072,7596176-7596253,759...    28   6.0  
06_01_1188 + 10219546-10219664,10220855-10223660                       27   8.0  
06_01_1168 - 9949128-9950621                                           27   8.0  
05_01_0326 - 2558237-2558344,2558605-2558706,2558867-2558944,255...    27   8.0  
03_05_0741 + 27287414-27287479,27287887-27287946,27288949-272891...    27   8.0  
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    27   8.0  
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588...    27   8.0  

>08_02_0749 - 20769224-20770535,20770649-20771510,20771622-20773263,
            20773357-20773701,20773858-20773952,20774218-20774344,
            20774430-20774435
          Length = 1462

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +1

Query: 298  RVFKKNLRSHNRRSAHARLSSGPRRRDTRPWSKP--HEGMHVRNAINCWRKSNRRS 459
            R F ++  S N   AH+R  SG R R    W+ P     + V  + + WR S  RS
Sbjct: 1208 RRFPQHRASLNLSRAHSRSPSGSRSRSPHAWTSPRNRREVMVNGSSSLWRHSRSRS 1263


>02_04_0481 +
           23284296-23284448,23284553-23284753,23284855-23287971,
           23288510-23289353,23289468-23290120,23290573-23290676,
           23290898-23291000
          Length = 1724

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +1

Query: 1   DESLLTKMKSLVERIRLENTTLKKSLDIERSRVRALKARYD---SALRNLK-TEHRKREE 168
           + S+L K+K   + +  E+  +K++LD++ S V  LK   D   S + NLK T + K  E
Sbjct: 784 NNSVLEKLKQAWDELNSESENIKQALDVKNSEVDKLKHALDENNSEIENLKHTLNEKNSE 843


>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
            31029955-31030017,31031597-31031704,31031772-31031836,
            31031928-31032015,31032104-31032157,31032234-31032380,
            31033358-31033429,31034077-31034226,31034317-31034430,
            31034762-31034875,31035925-31036077,31037437-31037529,
            31038202-31038318,31038984-31039086,31039192-31039376,
            31039448-31039522,31040451-31040534,31041547-31041588,
            31041668-31041847,31042109-31042162,31042239-31042280,
            31042869-31042967,31043040-31043174,31043325-31043427,
            31045061-31045134,31045227-31045270,31045393-31045471,
            31045592-31045705,31045842-31045946,31046027-31046161,
            31046447-31046546,31046870-31046883,31046936-31047004,
            31047079-31047182,31047299-31047347,31047931-31048023,
            31048102-31048210,31048619-31048755,31048851-31048928,
            31049015-31049104,31049402-31049467,31049546-31049638,
            31049711-31049839,31050024-31050122,31051366-31051512,
            31051605-31051910
          Length = 2050

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/34 (38%), Positives = 25/34 (73%)
 Frame = +1

Query: 1    DESLLTKMKSLVERIRLENTTLKKSLDIERSRVR 102
            +ES L +M+S ++  + E+ T+KKSL+ E +++R
Sbjct: 999  NESALKQMESALQDFKTESETIKKSLEDEITKLR 1032


>07_03_0337 +
           16918613-16919078,16921610-16921725,16922039-16922208,
           16922509-16922602,16923371-16923457,16923529-16923609,
           16923800-16923925,16924541-16924649,16924723-16924802,
           16925401-16925529,16925605-16925705,16926075-16926208,
           16926307-16926404,16926488-16926607,16927008-16927022,
           16927930-16927957,16928066-16928118,16928446-16928517,
           16928605-16928652,16928928-16929033,16929110-16929168,
           16929792-16929887,16929942-16929959
          Length = 801

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/76 (21%), Positives = 37/76 (48%)
 Frame = +1

Query: 7   SLLTKMKSLVERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQL 186
           SL +  +  +ER R + +   +S+D ER ++R + ++  + L   +     R   LEK  
Sbjct: 215 SLQSAAQQELERARQQASEALRSMDAERQQLRTVNSKLRTNLDEARVALEARNNVLEKLR 274

Query: 187 RTIARPHKQTDDAQSA 234
           +++    +  +  Q++
Sbjct: 275 QSMFEKEQLLEQTQAS 290


>10_06_0084 -
           10477880-10477897,10477940-10478002,10479523-10479575,
           10479774-10480589,10480889-10480998,10481338-10482068
          Length = 596

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 413 CIPSCGLLQGRVSRRLGPELSRA 345
           C PSCGL   R S R+G EL R+
Sbjct: 429 CRPSCGLAVLRYSLRIGNELDRS 451


>08_02_0957 +
           23033602-23034749,23035519-23035765,23036598-23036744,
           23036849-23037076
          Length = 589

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = +1

Query: 16  TKMKSLVERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQLRTI 195
           TK   +V R+   +  +   +   ++  R +K   +    +L T  ++ EEFL+   + +
Sbjct: 461 TKTDEMVARLDSLDVEIGNHVSRCKADARLMKDELEKKDHHLSTVEKESEEFLKISEKKL 520

Query: 196 ARPHKQTDDAQSACGR 243
               ++TD+    C R
Sbjct: 521 EDAKRETDEEIQMCAR 536


>06_01_1164 + 9921555-9922661
          Length = 368

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 474 AVLLSAPSI*FPPA-VYGIAHVHPFVRLAPRP 382
           A  L  P + F P+ VYG A +H   R+ PRP
Sbjct: 135 AAELGVPHVVFSPSGVYGTAMLHSLFRVMPRP 166


>11_01_0073 - 572794-572883,573188-573393,573491-573581
          Length = 128

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = +1

Query: 37  ERIRLENTTLKKSLDIERSRVRA---LKARYDSALRNLKTEHRKREEFLEKQLRTIARPH 207
           + +   N T +  +D  +S  R    L A  D  ++ L    R+ E      L TIAR  
Sbjct: 22  QSLHQRNKTERVKVDAVKSAARVADLLVATVDGGVQELYINERRIEFEARALLATIARFK 81

Query: 208 KQTDDAQSACGRLTDV 255
           KQTD   +A   +  V
Sbjct: 82  KQTDQWLAATNAINSV 97


>07_03_1436 - 26543846-26546806
          Length = 986

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 319 RSHNRRSAHARLSSGPRRRDTRPWSKPHE-GMHVRNAIN 432
           R H  RS H+       RR  RP S PH+  + +R+ IN
Sbjct: 365 RDHGERSVHSPPERHRERRVERPHSPPHQHPVDLRDMIN 403


>02_05_1282 +
           35442730-35442841,35443040-35443105,35443195-35443282,
           35443393-35443474,35443589-35443740,35443866-35443990,
           35444309-35444367
          Length = 227

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 37  ERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTE-HRKREEFLEKQLRTIARPHKQ 213
           E+ + EN   KK   I  S     KA  ++ LR  + +  RK+ E+ EK    +A  HK 
Sbjct: 82  EKSKAENKAQKKMSSI-LSWENTRKAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKA 140

Query: 214 TDDAQS 231
            ++ ++
Sbjct: 141 AEEKRA 146


>12_01_0074 - 615794-615883,616186-616391,616524-616614
          Length = 128

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +1

Query: 61  TLKKSLDIERSRVRA---LKARYDSALRNLKTEHRKREEFLEKQLRTIARPHKQTDDAQS 231
           T ++ +D  RS  R    L A  D   + L    R+ E      L TIAR  KQTD   +
Sbjct: 30  TDREKIDAVRSAARVADLLVATVDGGAQELYINERRIEIEARALLATIARYKKQTDQWLA 89

Query: 232 ACGRLTDV 255
           A   +  V
Sbjct: 90  ATNAINSV 97


>06_01_0978 +
           7595641-7595843,7595952-7596072,7596176-7596253,
           7596371-7596436,7596556-7596688,7596774-7596841,
           7596930-7597002,7597097-7597158,7597240-7597633,
           7597768-7597832
          Length = 420

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +2

Query: 380 RGLG-ASRTKGCTCAMP*TAG--GNQIEGADNSTAETRGGKIDRATNDQAQRMEFGANEF 550
           R LG A R +G T A+P T      +  G D +  + + GK+D    ++ +  + G N F
Sbjct: 280 RWLGQAKRNEGVTVALPPTKTLPNKRAFGTDLTNIDNKRGKLDSTMENRGKPTQDGGNLF 339

Query: 551 TRKLR 565
               R
Sbjct: 340 NNLQR 344


>06_01_1188 + 10219546-10219664,10220855-10223660
          Length = 974

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
 Frame = +1

Query: 19  KMKSLVERIRLENTTLKKS--LDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQLRT 192
           ++K++   +R    T KK   L +   +VR L    +  L   K     +   L KQL  
Sbjct: 45  ELKTIQAFLRAAEVTKKKDDLLKVWAEQVRDLSYNIEDCLDEFKVHVESQS--LAKQLMK 102

Query: 193 IARPHKQTDDAQSACGRLTDVKD*QQRFSL*KQLIRVFKKNLR 321
           +   H+     ++   R+ +V +   R+SL K +  +  ++ R
Sbjct: 103 LGERHRIAVQIRNLKSRIEEVSNRNTRYSLIKPISSITTEDER 145


>06_01_1168 - 9949128-9950621
          Length = 497

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 465 LSAPSI*FPPA-VYGIAHVHPFVRLAPRP 382
           L  P + F P+ VYG A +H   R  PRP
Sbjct: 147 LGVPHVVFSPSGVYGTAMLHSLFRAMPRP 175


>05_01_0326 -
           2558237-2558344,2558605-2558706,2558867-2558944,
           2559024-2559089,2559885-2559975,2560414-2560490,
           2560905-2561114,2561202-2561319,2561824-2561921,
           2562037-2562102,2562189-2562351,2563542-2563674,
           2563760-2563793
          Length = 447

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 234 LWQTHRRKRLTTEVQSLKAAYKGLQEK 314
           +W   + +R+T  + +++A YKGL+E+
Sbjct: 388 VWDLMQNRRITPSLPAVEAYYKGLKER 414


>03_05_0741 + 27287414-27287479,27287887-27287946,27288949-27289112,
            27289158-27289241,27290115-27290178,27291181-27291334,
            27291605-27291675,27292138-27292242,27292734-27292826,
            27293672-27293746,27294114-27294199,27294293-27294499,
            27294585-27294684,27294765-27294835,27294960-27295041,
            27295920-27296078,27296480-27296533,27296775-27296817,
            27297630-27297712,27298569-27298631,27298720-27298794,
            27299620-27299745,27300267-27300499,27300611-27300655,
            27300953-27301019,27302095-27302166,27302276-27302520,
            27302598-27302655,27302743-27302910,27303224-27303298,
            27303412-27303669
          Length = 1101

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 19   KMKSLVERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTEHR 156
            K+++  E  R  ++T +KSLD E    R  K R D    N+KT  R
Sbjct: 880  KLQTRNEDGRRSSSTSEKSLDQEDEDDRETKYRLDPKYANVKTPDR 925


>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 15  HQNEEPRRKDKAGEHDL--EEVARHRAEQSQST*SPL*QRSQESKD*TQEARRVLRKTVE 188
           H NEE R KD+  E D+  +E   + A + +S    +  +  E+++  +  R  L++ ++
Sbjct: 540 HDNEEKRLKDREDELDIKYKEQGENLALKEKSLIDNIDHQRLENEELLKRERADLQRNLQ 599

Query: 189 NHR 197
            HR
Sbjct: 600 LHR 602


>01_06_1535 +
           38057802-38057999,38058338-38058437,38058730-38058890,
           38059166-38059363,38059442-38059534,38059732-38059854,
           38060637-38060884,38061004-38061175,38061407-38061493,
           38061523-38061786,38062415-38062577,38062839-38062926,
           38063010-38063079,38063566-38063694,38063773-38063811,
           38065539-38065760,38065935-38065999,38066095-38066288,
           38066539-38066805,38066908-38066995,38067091-38067216,
           38067291-38067400,38067523-38067671
          Length = 1117

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 24/95 (25%), Positives = 49/95 (51%)
 Frame = +1

Query: 67  KKSLDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQLRTIARPHKQTDDAQSACGRL 246
           K + ++ER R+RAL +  ++ L N      ++ E L+KQL    R + + +     C  L
Sbjct: 215 KLNAELERMRLRALNSEDEAKLLN------EQLEDLKKQLDESVRENNEMEHRLLNCSSL 268

Query: 247 TDVKD*QQRFSL*KQLIRVFKKNLRSHNRRSAHAR 351
           +     ++  S  ++LI++ ++ LR++ +    AR
Sbjct: 269 SY----ERTPSDDQKLIKLLQEELRNYEKEVDEAR 299


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,655,491
Number of Sequences: 37544
Number of extensions: 268897
Number of successful extensions: 1027
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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