Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0712.Seq
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 33 0.12
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 32 0.28
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 30 1.5
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 2.6
10_06_0084 - 10477880-10477897,10477940-10478002,10479523-104795... 29 3.4
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 29 3.4
06_01_1164 + 9921555-9922661 29 3.4
11_01_0073 - 572794-572883,573188-573393,573491-573581 28 4.6
07_03_1436 - 26543846-26546806 28 4.6
02_05_1282 + 35442730-35442841,35443040-35443105,35443195-354432... 28 4.6
12_01_0074 - 615794-615883,616186-616391,616524-616614 28 6.0
06_01_0978 + 7595641-7595843,7595952-7596072,7596176-7596253,759... 28 6.0
06_01_1188 + 10219546-10219664,10220855-10223660 27 8.0
06_01_1168 - 9949128-9950621 27 8.0
05_01_0326 - 2558237-2558344,2558605-2558706,2558867-2558944,255... 27 8.0
03_05_0741 + 27287414-27287479,27287887-27287946,27288949-272891... 27 8.0
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 27 8.0
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 27 8.0
>08_02_0749 - 20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 298 RVFKKNLRSHNRRSAHARLSSGPRRRDTRPWSKP--HEGMHVRNAINCWRKSNRRS 459
R F ++ S N AH+R SG R R W+ P + V + + WR S RS
Sbjct: 1208 RRFPQHRASLNLSRAHSRSPSGSRSRSPHAWTSPRNRREVMVNGSSSLWRHSRSRS 1263
>02_04_0481 +
23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +1
Query: 1 DESLLTKMKSLVERIRLENTTLKKSLDIERSRVRALKARYD---SALRNLK-TEHRKREE 168
+ S+L K+K + + E+ +K++LD++ S V LK D S + NLK T + K E
Sbjct: 784 NNSVLEKLKQAWDELNSESENIKQALDVKNSEVDKLKHALDENNSEIENLKHTLNEKNSE 843
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 1 DESLLTKMKSLVERIRLENTTLKKSLDIERSRVR 102
+ES L +M+S ++ + E+ T+KKSL+ E +++R
Sbjct: 999 NESALKQMESALQDFKTESETIKKSLEDEITKLR 1032
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/76 (21%), Positives = 37/76 (48%)
Frame = +1
Query: 7 SLLTKMKSLVERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQL 186
SL + + +ER R + + +S+D ER ++R + ++ + L + R LEK
Sbjct: 215 SLQSAAQQELERARQQASEALRSMDAERQQLRTVNSKLRTNLDEARVALEARNNVLEKLR 274
Query: 187 RTIARPHKQTDDAQSA 234
+++ + + Q++
Sbjct: 275 QSMFEKEQLLEQTQAS 290
>10_06_0084 -
10477880-10477897,10477940-10478002,10479523-10479575,
10479774-10480589,10480889-10480998,10481338-10482068
Length = 596
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 413 CIPSCGLLQGRVSRRLGPELSRA 345
C PSCGL R S R+G EL R+
Sbjct: 429 CRPSCGLAVLRYSLRIGNELDRS 451
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +1
Query: 16 TKMKSLVERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQLRTI 195
TK +V R+ + + + ++ R +K + +L T ++ EEFL+ + +
Sbjct: 461 TKTDEMVARLDSLDVEIGNHVSRCKADARLMKDELEKKDHHLSTVEKESEEFLKISEKKL 520
Query: 196 ARPHKQTDDAQSACGR 243
++TD+ C R
Sbjct: 521 EDAKRETDEEIQMCAR 536
>06_01_1164 + 9921555-9922661
Length = 368
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 474 AVLLSAPSI*FPPA-VYGIAHVHPFVRLAPRP 382
A L P + F P+ VYG A +H R+ PRP
Sbjct: 135 AAELGVPHVVFSPSGVYGTAMLHSLFRVMPRP 166
>11_01_0073 - 572794-572883,573188-573393,573491-573581
Length = 128
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 37 ERIRLENTTLKKSLDIERSRVRA---LKARYDSALRNLKTEHRKREEFLEKQLRTIARPH 207
+ + N T + +D +S R L A D ++ L R+ E L TIAR
Sbjct: 22 QSLHQRNKTERVKVDAVKSAARVADLLVATVDGGVQELYINERRIEFEARALLATIARFK 81
Query: 208 KQTDDAQSACGRLTDV 255
KQTD +A + V
Sbjct: 82 KQTDQWLAATNAINSV 97
>07_03_1436 - 26543846-26546806
Length = 986
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 319 RSHNRRSAHARLSSGPRRRDTRPWSKPHE-GMHVRNAIN 432
R H RS H+ RR RP S PH+ + +R+ IN
Sbjct: 365 RDHGERSVHSPPERHRERRVERPHSPPHQHPVDLRDMIN 403
>02_05_1282 +
35442730-35442841,35443040-35443105,35443195-35443282,
35443393-35443474,35443589-35443740,35443866-35443990,
35444309-35444367
Length = 227
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 37 ERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTE-HRKREEFLEKQLRTIARPHKQ 213
E+ + EN KK I S KA ++ LR + + RK+ E+ EK +A HK
Sbjct: 82 EKSKAENKAQKKMSSI-LSWENTRKAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKA 140
Query: 214 TDDAQS 231
++ ++
Sbjct: 141 AEEKRA 146
>12_01_0074 - 615794-615883,616186-616391,616524-616614
Length = 128
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 61 TLKKSLDIERSRVRA---LKARYDSALRNLKTEHRKREEFLEKQLRTIARPHKQTDDAQS 231
T ++ +D RS R L A D + L R+ E L TIAR KQTD +
Sbjct: 30 TDREKIDAVRSAARVADLLVATVDGGAQELYINERRIEIEARALLATIARYKKQTDQWLA 89
Query: 232 ACGRLTDV 255
A + V
Sbjct: 90 ATNAINSV 97
>06_01_0978 +
7595641-7595843,7595952-7596072,7596176-7596253,
7596371-7596436,7596556-7596688,7596774-7596841,
7596930-7597002,7597097-7597158,7597240-7597633,
7597768-7597832
Length = 420
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 380 RGLG-ASRTKGCTCAMP*TAG--GNQIEGADNSTAETRGGKIDRATNDQAQRMEFGANEF 550
R LG A R +G T A+P T + G D + + + GK+D ++ + + G N F
Sbjct: 280 RWLGQAKRNEGVTVALPPTKTLPNKRAFGTDLTNIDNKRGKLDSTMENRGKPTQDGGNLF 339
Query: 551 TRKLR 565
R
Sbjct: 340 NNLQR 344
>06_01_1188 + 10219546-10219664,10220855-10223660
Length = 974
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +1
Query: 19 KMKSLVERIRLENTTLKKS--LDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQLRT 192
++K++ +R T KK L + +VR L + L K + L KQL
Sbjct: 45 ELKTIQAFLRAAEVTKKKDDLLKVWAEQVRDLSYNIEDCLDEFKVHVESQS--LAKQLMK 102
Query: 193 IARPHKQTDDAQSACGRLTDVKD*QQRFSL*KQLIRVFKKNLR 321
+ H+ ++ R+ +V + R+SL K + + ++ R
Sbjct: 103 LGERHRIAVQIRNLKSRIEEVSNRNTRYSLIKPISSITTEDER 145
>06_01_1168 - 9949128-9950621
Length = 497
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 465 LSAPSI*FPPA-VYGIAHVHPFVRLAPRP 382
L P + F P+ VYG A +H R PRP
Sbjct: 147 LGVPHVVFSPSGVYGTAMLHSLFRAMPRP 175
>05_01_0326 -
2558237-2558344,2558605-2558706,2558867-2558944,
2559024-2559089,2559885-2559975,2560414-2560490,
2560905-2561114,2561202-2561319,2561824-2561921,
2562037-2562102,2562189-2562351,2563542-2563674,
2563760-2563793
Length = 447
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 234 LWQTHRRKRLTTEVQSLKAAYKGLQEK 314
+W + +R+T + +++A YKGL+E+
Sbjct: 388 VWDLMQNRRITPSLPAVEAYYKGLKER 414
>03_05_0741 + 27287414-27287479,27287887-27287946,27288949-27289112,
27289158-27289241,27290115-27290178,27291181-27291334,
27291605-27291675,27292138-27292242,27292734-27292826,
27293672-27293746,27294114-27294199,27294293-27294499,
27294585-27294684,27294765-27294835,27294960-27295041,
27295920-27296078,27296480-27296533,27296775-27296817,
27297630-27297712,27298569-27298631,27298720-27298794,
27299620-27299745,27300267-27300499,27300611-27300655,
27300953-27301019,27302095-27302166,27302276-27302520,
27302598-27302655,27302743-27302910,27303224-27303298,
27303412-27303669
Length = 1101
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 19 KMKSLVERIRLENTTLKKSLDIERSRVRALKARYDSALRNLKTEHR 156
K+++ E R ++T +KSLD E R K R D N+KT R
Sbjct: 880 KLQTRNEDGRRSSSTSEKSLDQEDEDDRETKYRLDPKYANVKTPDR 925
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 15 HQNEEPRRKDKAGEHDL--EEVARHRAEQSQST*SPL*QRSQESKD*TQEARRVLRKTVE 188
H NEE R KD+ E D+ +E + A + +S + + E+++ + R L++ ++
Sbjct: 540 HDNEEKRLKDREDELDIKYKEQGENLALKEKSLIDNIDHQRLENEELLKRERADLQRNLQ 599
Query: 189 NHR 197
HR
Sbjct: 600 LHR 602
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 27.5 bits (58), Expect = 8.0
Identities = 24/95 (25%), Positives = 49/95 (51%)
Frame = +1
Query: 67 KKSLDIERSRVRALKARYDSALRNLKTEHRKREEFLEKQLRTIARPHKQTDDAQSACGRL 246
K + ++ER R+RAL + ++ L N ++ E L+KQL R + + + C L
Sbjct: 215 KLNAELERMRLRALNSEDEAKLLN------EQLEDLKKQLDESVRENNEMEHRLLNCSSL 268
Query: 247 TDVKD*QQRFSL*KQLIRVFKKNLRSHNRRSAHAR 351
+ ++ S ++LI++ ++ LR++ + AR
Sbjct: 269 SY----ERTPSDDQKLIKLLQEELRNYEKEVDEAR 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,655,491
Number of Sequences: 37544
Number of extensions: 268897
Number of successful extensions: 1027
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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