Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0712.Seq
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    27   0.57 
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    27   0.57 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.3  
AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450 pr...    23   5.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.3  

>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 26.6 bits (56), Expect = 0.57
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 228 VRLWQTHRRKRLTTEVQSLKAAYKGLQEKLKVAQSA 335
           +++W  +RR +L  E+Q++K   +  QEK   AQ A
Sbjct: 263 IKIWFQNRRMKLKKEIQAIKELNE--QEKQAQAQKA 296


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 0.57
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 228 VRLWQTHRRKRLTTEVQSLKAAYKGLQEKLKVAQSA 335
           +++W  +RR +L  E+Q++K   +  QEK   AQ A
Sbjct: 280 IKIWFQNRRMKLKKEIQAIKELNE--QEKQAQAQKA 313


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 489 PPLVSAVLLSAPSI*FPPAVYGIAHVHPFVRLAPRPRVSPPG 364
           P L  ++ L  P +  PPA   +   HP   + P+P   PPG
Sbjct: 585 PSLGLSMGLGLPQVPQPPAGSSLNLSHPSAGMVPQP--PPPG 624


>AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450
           protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 163 EEFLEKQLRTIARPHKQTD 219
           E FLE +  T  +PH  TD
Sbjct: 61  ERFLESERDTAGKPHLHTD 79


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 130  LRNLKTEHRKREEFLEKQL 186
            L+ +  EHR REE L+++L
Sbjct: 1402 LQQIVYEHRLREEALQREL 1420


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 130  LRNLKTEHRKREEFLEKQL 186
            L+ +  EHR REE L+++L
Sbjct: 1399 LQQIVYEHRLREEALQREL 1417


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,396
Number of Sequences: 2352
Number of extensions: 9023
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)