Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0710.Seq
(766 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4W8E2 Cluster: Putative uncharacterized protein precur... 138 1e-31
UniRef50_P0AAX5 Cluster: UPF0379 protein ybiJ precursor; n=40; E... 124 2e-27
UniRef50_Q57QE1 Cluster: Putative outer membrane protein; n=5; E... 60 8e-08
UniRef50_Q5PJU2 Cluster: Putative uncharacterized protein yhcN; ... 56 1e-06
UniRef50_Q2NTW2 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_P64615 Cluster: UPF0379 protein yhcN precursor; n=14; E... 53 7e-06
UniRef50_P0AAX7 Cluster: UPF0379 protein ybiM; n=15; Enterobacte... 53 7e-06
UniRef50_A4W8E4 Cluster: Putative uncharacterized protein precur... 52 1e-05
UniRef50_Q5PG22 Cluster: Putative uncharacterized protein; n=2; ... 45 0.002
UniRef50_UPI00005F9589 Cluster: hypothetical protein YfreA_01002... 41 0.039
UniRef50_A6T6P9 Cluster: Putative uncharacterized protein ybiM; ... 41 0.039
UniRef50_UPI00005F8F2F Cluster: hypothetical protein YfreA_01000... 40 0.068
UniRef50_Q1RA28 Cluster: Ribonucleoside diphosphage reductase 1,... 39 0.12
UniRef50_A4W9M2 Cluster: Putative uncharacterized protein precur... 39 0.16
UniRef50_A4WFJ9 Cluster: Putative uncharacterized protein precur... 38 0.21
UniRef50_Q47216 Cluster: Pot. ORF2; n=1; Escherichia coli|Rep: P... 36 0.83
UniRef50_O87512 Cluster: R10; n=3; Enterobacteriaceae|Rep: R10 -... 36 0.83
UniRef50_Q2NW42 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q3CH72 Cluster: Binding-protein-dependent transport sys... 34 3.4
UniRef50_P30178 Cluster: Uncharacterized oxidoreductase ybiC; n=... 33 7.8
>UniRef50_A4W8E2 Cluster: Putative uncharacterized protein
precursor; n=21; Enterobacteriaceae|Rep: Putative
uncharacterized protein precursor - Enterobacter sp. 638
Length = 123
Score = 138 bits (334), Expect = 1e-31
Identities = 71/123 (57%), Positives = 88/123 (71%)
Frame = +3
Query: 120 LNKAVNSLRFYLS*KNVILITSTKQRHLYKNHLREINYENYQYCCAAMALSTLSFGVFAA 299
++ AVNSLR YL KNVILITST+ R L + + + +Y AA+AL+TLSFG FAA
Sbjct: 1 MSNAVNSLRLYLPQKNVILITSTEHRPLNRTTCERLTMKTIKYAVAAIALTTLSFGAFAA 60
Query: 300 EPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYSITSATNNNKLSGTAV 479
+ VT +QAQNMNK+GVVSA+GA+TLD GASGY+ITSA +NNKLSGTAV
Sbjct: 61 QSVTEAQAQNMNKLGVVSAEGATTLDGLEAKLAEKASAAGASGYTITSANSNNKLSGTAV 120
Query: 480 IYK 488
IY+
Sbjct: 121 IYQ 123
>UniRef50_P0AAX5 Cluster: UPF0379 protein ybiJ precursor; n=40;
Enterobacteriaceae|Rep: UPF0379 protein ybiJ precursor -
Shigella flexneri
Length = 86
Score = 124 bits (300), Expect = 2e-27
Identities = 65/78 (83%), Positives = 65/78 (83%)
Frame = +3
Query: 255 AAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYS 434
AAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLD GASGYS
Sbjct: 9 AAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYS 68
Query: 435 ITSATNNNKLSGTAVIYK 488
ITSATNNNKLSGTAVIYK
Sbjct: 69 ITSATNNNKLSGTAVIYK 86
>UniRef50_Q57QE1 Cluster: Putative outer membrane protein; n=5;
Enterobacteriaceae|Rep: Putative outer membrane protein
- Salmonella choleraesuis
Length = 107
Score = 59.7 bits (138), Expect = 8e-08
Identities = 36/91 (39%), Positives = 46/91 (50%)
Frame = +3
Query: 216 LREINYENYQYCCAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXX 395
L+ I +N + AA LS+LSF FAA V A+ + K G +SA+G + L
Sbjct: 18 LKVITMKNVKNLIAAAVLSSLSFASFAAVEVQATP-EGQQKFGTISANGGTNLGSLEDQL 76
Query: 396 XXXXXXXGASGYSITSATNNNKLSGTAVIYK 488
GA + ITS T N L GTAVIYK
Sbjct: 77 AQKAQEMGAKSFRITSVTGPNTLHGTAVIYK 107
>UniRef50_Q5PJU2 Cluster: Putative uncharacterized protein yhcN;
n=20; Enterobacteriaceae|Rep: Putative uncharacterized
protein yhcN - Salmonella paratyphi-a
Length = 87
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 267 LSTLSFGVFAAEPVTASQAQNMNKIG--VVSADGASTLDXXXXXXXXXXXXXGASGYSIT 440
LS LSFG FAAEP++A QAQN IG VSA G+S +D GA+ Y IT
Sbjct: 13 LSVLSFGAFAAEPISAEQAQNREAIGSVSVSAIGSSPMD-MNAMLSKKADEQGATAYHIT 71
Query: 441 SATNNNKLSGTAVIYK 488
A + + TA +YK
Sbjct: 72 EARSGSNWHATAELYK 87
>UniRef50_Q2NTW2 Cluster: Putative uncharacterized protein; n=1;
Sodalis glossinidius str. 'morsitans'|Rep: Putative
uncharacterized protein - Sodalis glossinidius (strain
morsitans)
Length = 86
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +3
Query: 255 AAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYS 434
+++ L++LS FAAEP++ +A + +G +S GA+TLD GA Y
Sbjct: 9 SSLLLASLSLPTFAAEPISRQEAVDKQALGTISITGAATLDHLEHNIAQKADQAGAKYYV 68
Query: 435 ITSATNNNKLSGTAVIYK 488
I + T N+L G A+IY+
Sbjct: 69 IIATTGKNRLHGDALIYQ 86
>UniRef50_P64615 Cluster: UPF0379 protein yhcN precursor; n=14;
Enterobacteriaceae|Rep: UPF0379 protein yhcN precursor -
Escherichia coli O6
Length = 87
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 AAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG-ASTLDXXXXXXXXXXXXXGASGY 431
A LS LSFG FAA+ + A+QAQN IG VS G AS+ GA+ Y
Sbjct: 9 ALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAY 68
Query: 432 SITSATNNNKLSGTAVIYK 488
IT A + + TA +YK
Sbjct: 69 QITEARSGDTWHATAELYK 87
>UniRef50_P0AAX7 Cluster: UPF0379 protein ybiM; n=15;
Enterobacteriaceae|Rep: UPF0379 protein ybiM -
Escherichia coli O157:H7
Length = 134
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/77 (37%), Positives = 39/77 (50%)
Frame = +3
Query: 258 AMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYSI 437
A LS +S +AA+P++ + + G VSA GAS L GA GY I
Sbjct: 58 ATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVI 117
Query: 438 TSATNNNKLSGTAVIYK 488
SA N+++ GTA IYK
Sbjct: 118 NSAGGNDQMFGTATIYK 134
>UniRef50_A4W8E4 Cluster: Putative uncharacterized protein
precursor; n=1; Enterobacter sp. 638|Rep: Putative
uncharacterized protein precursor - Enterobacter sp. 638
Length = 87
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +3
Query: 258 AMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYSI 437
A +L++ SF ++AE ++ S + G VS GA+ LD GASG+ +
Sbjct: 11 AGSLASASFSAWSAESLSRSDTGQLRPAGTVSVTGAANLDDLQSKLAEKAKDEGASGFVV 70
Query: 438 TSATNNNKLSGTAVIYK 488
SA N++ GTA IYK
Sbjct: 71 NSAGGENRMFGTATIYK 87
>UniRef50_Q5PG22 Cluster: Putative uncharacterized protein; n=2;
Salmonella|Rep: Putative uncharacterized protein -
Salmonella paratyphi-a
Length = 46
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2
Query: 104 ISINLFEQGGQFSSILSLVKKRDTHHIDETTS 199
+S FEQG QF SILS K RDTHHID T+S
Sbjct: 1 MSFKNFEQGRQFYSILSFAKNRDTHHIDGTSS 32
>UniRef50_UPI00005F9589 Cluster: hypothetical protein
YfreA_01002624; n=1; Yersinia frederiksenii ATCC
33641|Rep: hypothetical protein YfreA_01002624 -
Yersinia frederiksenii ATCC 33641
Length = 84
Score = 40.7 bits (91), Expect = 0.039
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 261 MALSTLSFGVF--AAEPVTASQAQNMN---KIGVVSADGASTLDXXXXXXXXXXXXXGAS 425
+++ L G F + V+A++ Q+ + +IGVVS G TL GAS
Sbjct: 4 ISILVLFMGTFFMSKTAVSATEVQSSDAHTEIGVVSVQGKMTLSEVSESLAKKADDEGAS 63
Query: 426 GYSITSATNNNKLSGTAVIYK 488
Y I +A NNKL G A IY+
Sbjct: 64 YYKIIAAGGNNKLFGVAQIYR 84
>UniRef50_A6T6P9 Cluster: Putative uncharacterized protein ybiM;
n=1; Klebsiella pneumoniae subsp. pneumoniae MGH
78578|Rep: Putative uncharacterized protein ybiM -
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Length = 96
Score = 40.7 bits (91), Expect = 0.039
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 330 MNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYSITSATNNNKLSGTAVIYK 488
+ +G VSA GASTLD GA + I +A++ N+L G+A+IY+
Sbjct: 44 LRPVGTVSAFGASTLDDLAAALADKAHRQGAIAWRINAASSGNRLYGSAIIYQ 96
>UniRef50_UPI00005F8F2F Cluster: hypothetical protein
YfreA_01000911; n=1; Yersinia frederiksenii ATCC
33641|Rep: hypothetical protein YfreA_01000911 -
Yersinia frederiksenii ATCC 33641
Length = 81
Score = 39.9 bits (89), Expect = 0.068
Identities = 26/77 (33%), Positives = 35/77 (45%)
Frame = +3
Query: 258 AMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXXXGASGYSI 437
A+A S S AA+P Q QNM+ G V+ +TL AS Y +
Sbjct: 9 AIAASLFSASALAAQP----QLQNMHCAGSVAVSAMTTLSEVEKGIAEQAKAKNASHYRV 64
Query: 438 TSATNNNKLSGTAVIYK 488
S + NNK +AVIY+
Sbjct: 65 ISVSGNNKFPVSAVIYR 81
>UniRef50_Q1RA28 Cluster: Ribonucleoside diphosphage reductase 1,
beta subunit, B2; n=1; Escherichia coli UTI89|Rep:
Ribonucleoside diphosphage reductase 1, beta subunit, B2
- Escherichia coli (strain UTI89 / UPEC)
Length = 103
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/29 (72%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -3
Query: 578 SDFVGLIRRGSVASGICCRM-RVNAYPSY 495
SD VGLIRR SVASG CRM R YPSY
Sbjct: 56 SDLVGLIRRVSVASGTECRMRRKTPYPSY 84
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 581 GSDFVGLIRRGSVASGICCRMR 516
G D VGLIRR SVASG CRMR
Sbjct: 23 GLDLVGLIRRASVASGTECRMR 44
>UniRef50_A4W9M2 Cluster: Putative uncharacterized protein
precursor; n=3; Enterobacteriaceae|Rep: Putative
uncharacterized protein precursor - Enterobacter sp. 638
Length = 113
Score = 38.7 bits (86), Expect = 0.16
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 219 REINYEN-YQYCCAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSA 356
+E N N ++ AAM LS LSFGVFAA+ T S + +IG+ A
Sbjct: 32 KEKNIMNKFKTAAAAMVLSALSFGVFAADSATQSASDASTQIGITRA 78
>UniRef50_A4WFJ9 Cluster: Putative uncharacterized protein
precursor; n=3; Enterobacteriaceae|Rep: Putative
uncharacterized protein precursor - Enterobacter sp. 638
Length = 89
Score = 38.3 bits (85), Expect = 0.21
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 AAMALSTLSFGVFAAEPVTASQAQNMN--KIG-VVSADGASTLDXXXXXXXXXXXXXGAS 425
A++ + +LSF VFAA+ + + MN KIG + ++D + +D G +
Sbjct: 9 ASLVIGSLSFSVFAAQELEKDKVAGMNLTKIGDITTSDTTAPMD-AKKELSKKADELGGT 67
Query: 426 GYSITSATNNNK-LSGTAVIYK 488
Y ITSA N K + TA +YK
Sbjct: 68 YYVITSANKNEKSVHATADVYK 89
>UniRef50_Q47216 Cluster: Pot. ORF2; n=1; Escherichia coli|Rep: Pot.
ORF2 - Escherichia coli
Length = 62
Score = 36.3 bits (80), Expect = 0.83
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +2
Query: 539 MRRYRVLSGLQN-PNRWTDQAFTLRP 613
MRR+RVLSGLQ PNR +D+AFT P
Sbjct: 1 MRRWRVLSGLQTAPNRRSDKAFTPHP 26
>UniRef50_O87512 Cluster: R10; n=3; Enterobacteriaceae|Rep: R10 -
Escherichia coli
Length = 86
Score = 36.3 bits (80), Expect = 0.83
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +3
Query: 237 NYQYCCAAMALSTLSFG-VFAAEPVTASQAQNMNKIGVVSADGASTLDXXXXXXXXXXXX 413
NY C +AL + G AA+ + + +S T +
Sbjct: 2 NYVICTTIVALGLILTGYATAADEINRQDVVGLMPSDYISVGNLYTPEEVATALKDKAEQ 61
Query: 414 XGASGYSITSATNNNKLSGTAVIYK 488
G S + ITS NKL GTA+IY+
Sbjct: 62 AGGSHFRITSLGGKNKLDGTAIIYR 86
>UniRef50_Q2NW42 Cluster: Putative uncharacterized protein; n=1;
Sodalis glossinidius str. 'morsitans'|Rep: Putative
uncharacterized protein - Sodalis glossinidius (strain
morsitans)
Length = 68
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 264 ALSTLSFGVFAAEPVTASQAQNMNKIGVVS-ADGA 365
ALS LSFG FA + ++ Q Q++ +G VS DGA
Sbjct: 12 ALSALSFGAFAVDSISLQQTQDLQPMGSVSGVDGA 46
>UniRef50_Q3CH72 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Thermoanaerobacter ethanolicus ATCC 33223|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Thermoanaerobacter
ethanolicus ATCC 33223
Length = 429
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 576 RTVGRIRRLRYVQHKYFPVCLPTDAYALTLIDPMLPL 686
+ +G ++ +RYV HKYFP + A+ L L +LP+
Sbjct: 112 KPMGIVKFVRYVSHKYFPYLSLSPAFVLILFFTLLPI 148
>UniRef50_P30178 Cluster: Uncharacterized oxidoreductase ybiC; n=31;
Proteobacteria|Rep: Uncharacterized oxidoreductase ybiC
- Escherichia coli (strain K12)
Length = 361
Score = 33.1 bits (72), Expect = 7.8
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 762 PEETLQAFCQQLAS 721
PEETLQAFCQQLAS
Sbjct: 348 PEETLQAFCQQLAS 361
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,492,276
Number of Sequences: 1657284
Number of extensions: 15811587
Number of successful extensions: 43939
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 41686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43892
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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