Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0710.Seq
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66839-1|AAB40652.1|  347|Homo sapiens MAP kinase 3b protein.          32   2.0  
D87116-1|BAA13248.1|  347|Homo sapiens MAP kinase kinase 3b prot...    32   2.0  
CR541793-1|CAG46592.1|  347|Homo sapiens MAP2K3 protein.               32   2.0  
CR536514-1|CAG38752.1|  347|Homo sapiens MAP2K3 protein.               32   2.0  
BC032478-1|AAH32478.1|  347|Homo sapiens mitogen-activated prote...    32   2.0  
AK223490-1|BAD97210.1|  347|Homo sapiens mitogen-activated prote...    32   2.0  
BC024298-1|AAH24298.1| 1359|Homo sapiens RAD54-like 2 (S. cerevi...    30   7.9  
BC001474-1|AAH01474.2| 1159|Homo sapiens RAD54L2 protein protein.      30   7.9  
AK131432-1|BAD18578.1|  421|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AB018352-1|BAA34529.2| 1385|Homo sapiens KIAA0809 protein protein.     30   7.9  

>U66839-1|AAB40652.1|  347|Homo sapiens MAP kinase 3b protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 411 PRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGMPLPVPPR 292
           P  SQP S+P  +G  + R+K  R    S P  P P PPR
Sbjct: 4   PASSQPASMPQSKGKSK-RKKDLRISCMSKPPAPNPTPPR 42


>D87116-1|BAA13248.1|  347|Homo sapiens MAP kinase kinase 3b
           protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 411 PRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGMPLPVPPR 292
           P  SQP S+P  +G  + R+K  R    S P  P P PPR
Sbjct: 4   PASSQPASMPQSKGKSK-RKKDLRISCMSKPPAPNPTPPR 42


>CR541793-1|CAG46592.1|  347|Homo sapiens MAP2K3 protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 411 PRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGMPLPVPPR 292
           P  SQP S+P  +G  + R+K  R    S P  P P PPR
Sbjct: 4   PASSQPASMPQSKGKSK-RKKDLRISCMSKPPAPNPTPPR 42


>CR536514-1|CAG38752.1|  347|Homo sapiens MAP2K3 protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 411 PRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGMPLPVPPR 292
           P  SQP S+P  +G  + R+K  R    S P  P P PPR
Sbjct: 4   PASSQPASMPQSKGKSK-RKKDLRISCMSKPPAPNPTPPR 42


>BC032478-1|AAH32478.1|  347|Homo sapiens mitogen-activated protein
           kinase kinase 3 protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 411 PRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGMPLPVPPR 292
           P  SQP S+P  +G  + R+K  R    S P  P P PPR
Sbjct: 4   PASSQPASMPQSKGKSK-RKKDLRISCMSKPPAPNPTPPR 42


>AK223490-1|BAD97210.1|  347|Homo sapiens mitogen-activated protein
           kinase kinase 3 isoform B variant protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 411 PRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGMPLPVPPR 292
           P  SQP S+P  +G  + R+K  R    S P  P P PPR
Sbjct: 4   PASSQPASMPQSKGKSK-RKKDLRISCMSKPPAPNPTPPR 42


>BC024298-1|AAH24298.1| 1359|Homo sapiens RAD54-like 2 (S. cerevisiae)
            protein.
          Length = 1359

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
 Frame = +1

Query: 385  KRNWLRKPRQPV----PVDTASLPPPTTIN*AVLR*FISNS*DG*AF---TRIRQQMPDA 543
            ++  L  P QP     PV      PP ++N  +   F S + +   F   T    Q+ + 
Sbjct: 1165 RKGHLPAPVQPYEHGYPVSGGFAMPPVSLNHNLTTPFTSQAGENSLFMGSTPSYYQLSNL 1224

Query: 544  TLP-RLIRPTKSEPLDGSGVYATSSTSISLSVCRQTHML*PSL 669
                RL+ P  ++PL  +G  ++SST+ S++    + ML PS+
Sbjct: 1225 LADARLVFPVTTDPLVPAGPVSSSSTATSVTASNPSFMLNPSV 1267


>BC001474-1|AAH01474.2| 1159|Homo sapiens RAD54L2 protein protein.
          Length = 1159

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
 Frame = +1

Query: 385  KRNWLRKPRQPV----PVDTASLPPPTTIN*AVLR*FISNS*DG*AF---TRIRQQMPDA 543
            ++  L  P QP     PV      PP ++N  +   F S + +   F   T    Q+ + 
Sbjct: 965  RKGHLPAPVQPYEHGYPVSGGFAMPPVSLNHNLTTPFTSQAGENSLFMGSTPSYYQLSNL 1024

Query: 544  TLP-RLIRPTKSEPLDGSGVYATSSTSISLSVCRQTHML*PSL 669
                RL+ P  ++PL  +G  ++SST+ S++    + ML PS+
Sbjct: 1025 LADARLVFPVTTDPLVPAGPVSSSSTATSVTASNPSFMLNPSV 1067


>AK131432-1|BAD18578.1|  421|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16557 fis, clone SYNOV2021953, moderately
           similar to Mus musculus zinc finger protein 385
           (Zfp385). ).
          Length = 421

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 435 CCIHWHRLPRLSQPVSLPGHRGWMRHRQKPRRFYSCSVPGM-PLPVPPRTRQMT 277
           C +H +   +L Q +S   H+  +  +    ++  C V G+ P P+PP  RQ++
Sbjct: 368 CDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYTPCKVIGLLPKPLPPANRQLS 421


>AB018352-1|BAA34529.2| 1385|Homo sapiens KIAA0809 protein protein.
          Length = 1385

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
 Frame = +1

Query: 385  KRNWLRKPRQPV----PVDTASLPPPTTIN*AVLR*FISNS*DG*AF---TRIRQQMPDA 543
            ++  L  P QP     PV      PP ++N  +   F S + +   F   T    Q+ + 
Sbjct: 1191 RKGHLPAPVQPYEHGYPVSGGFAMPPVSLNHNLTTPFTSQAGENSLFMGSTPSYYQLSNL 1250

Query: 544  TLP-RLIRPTKSEPLDGSGVYATSSTSISLSVCRQTHML*PSL 669
                RL+ P  ++PL  +G  ++SST+ S++    + ML PS+
Sbjct: 1251 LADARLVFPVTTDPLVPAGPVSSSSTATSVTASNPSFMLNPSV 1293


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,142,247
Number of Sequences: 237096
Number of extensions: 2381137
Number of successful extensions: 5451
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5448
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)