Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0709.Seq
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    46   2e-04
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      31   3.5  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    31   3.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +1

Query: 493 KKQRRLNAWLPQASYPCGNFSGTSC*K 573
           K    +NAW PQASYPCGNFS TSC K
Sbjct: 11  KSDVAMNAWPPQASYPCGNFSDTSCLK 37



 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 464 MIGRADIEGSKSNVA 508
           MIGRADIEGSKS+VA
Sbjct: 1   MIGRADIEGSKSDVA 15


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 298 HALGRAAGGAKLPSADYA*TPLRPKPA*PNPARICSLWSPESRE 167
           H    A  G   P+++   TP  P P  P PA +CS  SPE R+
Sbjct: 51  HLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 298 HALGRAAGGAKLPSADYA*TPLRPKPA*PNPARICSLWSPESRE 167
           H    A  G   P+++   TP  P P  P PA +CS  SPE R+
Sbjct: 51  HLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,948,714
Number of Sequences: 237096
Number of extensions: 2624632
Number of successful extensions: 5617
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5617
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)