Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0705.Seq
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130446-1|AAI30447.1|  262|Homo sapiens chromosome 20 open read...    60   8e-09
AL117382-3|CAI23111.1|  262|Homo sapiens chromosome 20 open read...    60   8e-09
BC139911-1|AAI39912.1|  292|Homo sapiens similar to CG10671-like...    40   0.007
BC042179-1|AAH42179.1|   96|Homo sapiens LOC161247 protein protein.    40   0.007

>BC130446-1|AAI30447.1|  262|Homo sapiens chromosome 20 open reading
           frame 142 protein.
          Length = 262

 Score = 60.1 bits (139), Expect = 8e-09
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
 Frame = +2

Query: 2   ITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATVFWWGWTTLFNVIENNYGRCNS----- 166
           + +P++ LT+Y    GK  ++    +  LL+ T  W+  T++F+ IE+  G C       
Sbjct: 71  LLLPFIALTNYHLT-GKAGLVLR-RLSTLLVGTAIWYICTSIFSNIEHYTGSCYQSPALE 128

Query: 167 ---KSYDNKITCLKNGSFWNGFDISGHCFILIF 256
              K + +K  C + G FW+GFDISGH F+L F
Sbjct: 129 GVRKEHQSKQQCHQEGGFWHGFDISGHSFLLTF 161



 Score = 30.7 bits (66), Expect = 5.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 510 LYYHIMVEKFISGVIAILTWFVTYRVWY 593
           +Y+H + +K    +  +L+W+ TY  WY
Sbjct: 211 VYFHNLSQKVFGTLFGLLSWYGTYGFWY 238


>AL117382-3|CAI23111.1|  262|Homo sapiens chromosome 20 open reading
           frame 142 protein.
          Length = 262

 Score = 60.1 bits (139), Expect = 8e-09
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
 Frame = +2

Query: 2   ITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATVFWWGWTTLFNVIENNYGRCNS----- 166
           + +P++ LT+Y    GK  ++    +  LL+ T  W+  T++F+ IE+  G C       
Sbjct: 71  LLLPFIALTNYHLT-GKAGLVLR-RLSTLLVGTAIWYICTSIFSNIEHYTGSCYQSPALE 128

Query: 167 ---KSYDNKITCLKNGSFWNGFDISGHCFILIF 256
              K + +K  C + G FW+GFDISGH F+L F
Sbjct: 129 GVRKEHQSKQQCHQEGGFWHGFDISGHSFLLTF 161



 Score = 30.7 bits (66), Expect = 5.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 510 LYYHIMVEKFISGVIAILTWFVTYRVWY 593
           +Y+H + +K    +  +L+W+ TY  WY
Sbjct: 211 VYFHNLSQKVFGTLFGLLSWYGTYGFWY 238


>BC139911-1|AAI39912.1|  292|Homo sapiens similar to CG10671-like
           protein.
          Length = 292

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
 Frame = +2

Query: 53  RRMIATA-HMVRLLIATVFWWGWTTLFNVIENNYGRCNS--------KSYDNKITCLKNG 205
           RR+  TA H+ RL++    W G    F +IE+  G C              ++ +CL  G
Sbjct: 116 RRVAVTARHLSRLVVGAAVWRGAGRAFLLIEDLTGSCFEPLPQGLLLHELPDRRSCLAAG 175

Query: 206 SFWNGFDISGHCFILIF 256
             W G+ +S H F+L F
Sbjct: 176 HQWRGYTVSSHTFLLTF 192



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 510 LYYHIMVEKFISGVIAILTWFVTYRVWYTFPYILPNKPGQGVF 638
           +Y+H    K +   +    W++TY  WY  P+  P  PG G+F
Sbjct: 241 IYFHQYTHKVVGAAVGTFAWYLTYGSWYHQPW-SPGSPGHGLF 282


>BC042179-1|AAH42179.1|   96|Homo sapiens LOC161247 protein protein.
          Length = 96

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 510 LYYHIMVEKFISGVIAILTWFVTYRVWYTFPYILPNKPGQGVF 638
           +Y+H    K +   +    W++TY  WY  P+  P  PG G+F
Sbjct: 45  IYFHQYTHKVVGAAVGTFAWYLTYGSWYHQPW-SPGSPGHGLF 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,049,506
Number of Sequences: 237096
Number of extensions: 2673981
Number of successful extensions: 7395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7393
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)