Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0705.Seq
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81143-6|CAI58649.1|  283|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AL137227-7|CAB70235.1|  787|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AC024788-1|AAF60612.2|  235|Caenorhabditis elegans Hypothetical ...    29   4.8  

>Z81143-6|CAI58649.1|  283|Caenorhabditis elegans Hypothetical
           protein ZK265.9 protein.
          Length = 283

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +3

Query: 510 LYYHIMVEKFISGVIAILTWFVTYRVWY 593
           LYYHI +E+ +  V A++ WFVTYR+ Y
Sbjct: 240 LYYHIFIEEILGAVAAVVCWFVTYRMLY 267



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 83  RLLIATVFWWGWTTLFNVIENNYGRCNSKSYDNKITCLKNGSFWN-GFDISGHCFILIFQ 259
           RL + T  W+     F+ +      C+      +  C +    W  G+DISGHCF++I+ 
Sbjct: 120 RLGVGTACWYFSVQFFHKVLALTSMCDKGRTLTRAQCSEKEGVWTPGYDISGHCFLMIYS 179

Query: 260 V 262
           +
Sbjct: 180 I 180


>AL137227-7|CAB70235.1|  787|Caenorhabditis elegans Hypothetical
           protein F58D5.6 protein.
          Length = 787

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 298 WERIKDYIRDERYSRSIDDKAISTNPLKNISSEELEILKRSYEKFTPYVRGLFIGIAALQ 477
           W+RI D I+ E     +D   + T P+K      L  +K+  E+  P + G F G   L 
Sbjct: 402 WDRINDEIKFEPLIEMLDKFIVITKPVKTF-VPFLATIKQFTEEDIPQILGSFDGTNILD 460

Query: 478 LL 483
           ++
Sbjct: 461 VI 462


>Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical
           protein W09D12.3 protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = +2

Query: 116 WTTLFNVIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCFILI 253
           WTT+  ++EN + + +S+ +++ I  L    F N F +SG+  +LI
Sbjct: 189 WTTV--LLENRWKKSHSRRHNHFIKKLTRVIFCNSFLMSGNLLLLI 232


>Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical
           protein C44C10.7 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 134 VIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCF 244
           +I+N+  R N   YD  I  ++N S +N  ++ GHC+
Sbjct: 300 IIKNDPNRFN---YDCVIHAIENASLFNPSEVIGHCY 333


>AC024788-1|AAF60612.2|  235|Caenorhabditis elegans Hypothetical
           protein Y46E12A.3 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 336 VSFISDVIFNALPSIYCSGFFY*N 265
           V F  D+IF++LP IY  G+F  N
Sbjct: 128 VEFQKDLIFDSLPLIYVDGYFLGN 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,435,412
Number of Sequences: 27780
Number of extensions: 414688
Number of successful extensions: 1015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)