Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0704.Seq
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1187 + 9444742-9445317 39 0.003
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 36 0.025
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 36 0.025
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 36 0.025
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 36 0.033
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 36 0.033
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 36 0.043
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 36 0.043
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 35 0.057
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 34 0.099
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 34 0.099
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 32 0.40
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 32 0.40
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 32 0.53
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 31 0.70
02_04_0582 - 24076614-24076643,24076961-24077440 30 1.6
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969... 29 2.8
04_04_0994 + 29980076-29980441,29980900-29980998,29981075-299816... 29 2.8
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 29 3.7
01_01_0261 + 2119519-2121033 29 3.7
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 28 6.5
08_02_1044 + 23913849-23915090 28 6.5
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 28 6.5
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 28 8.6
01_01_0881 - 6908939-6909190,6909298-6909351,6909588-6909734,690... 28 8.6
>01_01_1187 + 9444742-9445317
Length = 191
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 344 LHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L L FP +P+ PP +R P V G IC+++L + W+SAY V +++S
Sbjct: 98 LSLAFPGEYPYKPPKVRFETPCFHPN-VDAHGNICLDILQDK-WSSAYDVRTILLS 151
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L+ + FP ++PF PP + + ++ + G+IC+++L + W+ A TV V++S
Sbjct: 51 LVSIHFPPDYPFKPPKV-AFKTKVFHPNINSNGSICLDILKEQ-WSPALTVSKVLLS 105
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L+ + FP ++PF PP + ++ ++ + G+IC+++L + W+ A T+ V++S
Sbjct: 51 LVTIHFPPDYPFKPPKV-ALKTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLS 105
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L+++ FP ++PF PP + + ++ + G+IC+++L + W+ A T+ V++S
Sbjct: 51 LVNIHFPPDYPFKPPKVS-FKTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLS 105
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L+++ FP ++PF PP + ++ + G+IC+++L + W+ A T+ V++S
Sbjct: 51 LVNIHFPPDYPFKPPKVS-FRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLS 105
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
++ + P +PF PP M+ I + GAIC+++L + W+ A T++ ++S
Sbjct: 54 VIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQ-WSPALTLKTALLS 109
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 344 LHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
+++ FP ++PF PP + + ++ + G+IC+++L + W+ A T+ V++S
Sbjct: 52 VNIHFPPDYPFKPPKVN-FQTKVYHPNINSNGSICLDILKEQ-WSPALTISKVLLS 105
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLT--PRG-WASAYTVEAVVMS 511
+L + PE +PF PP + + P I + GG IC+++L P+G W + + V+ S
Sbjct: 61 VLKIQIPERYPFQPPNVTFVTP-IYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTS 119
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L+ + FP ++PF PP + ++ + G+IC+++L + W+ A T+ V++S
Sbjct: 275 LVTIHFPPDYPFKPPKV-AFRTKVFHPNINSNGSICLDILKDQ-WSPALTISKVLLS 329
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 34.3 bits (75), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 344 LHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L + FPE++P P + + P + G IC+++L W+ A TV +V +S
Sbjct: 57 LQVDFPEHYPMEAPQVIFLNPAPMHPHIYSNGHICLDILYD-SWSPAMTVSSVCIS 111
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 341 LLHLVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRGWASAYTVEAVVMS 511
L+ + FP ++PF PP + + ++ + G IC+++L + W+ A T+ V++S
Sbjct: 51 LVTIHFPPDYPFKPPKV-AFKTKVFHPNINSNGNICLDILKDQ-WSPALTISKVLLS 105
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/85 (25%), Positives = 32/85 (37%)
Frame = -2
Query: 624 SFYDGAERFFGPSPREFAGGTSRRPRNPALPLHHRRRELITTASTVYADAQPRGVSSSMH 445
S+ D A+ P+P A G +R R+ +P H R R + S+
Sbjct: 8 SWADVADADPAPAPAPAANGPARPDRSSYVPPHLRNRGASSGGGAAAPPPSSSSSSAPPP 67
Query: 444 IAPPSITNPLSILGSMTRINGGANG 370
A P + P M R+ GG G
Sbjct: 68 RAAPGLLAPRPAAAGMGRMGGGGGG 92
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Frame = +2
Query: 350 LVFPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRG------------WASAYTV 493
+ FP+N+P +PP +R V G +C+ +L P G W +TV
Sbjct: 61 MTFPQNYPNSPPSVRFTSEMWHPN-VYPDGRVCISILHPPGEDPNGYELASERWTPVHTV 119
Query: 494 EAVVMS 511
E++V+S
Sbjct: 120 ESIVLS 125
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 31.9 bits (69), Expect = 0.53
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Frame = -2
Query: 594 GPSPREFAGGTSRR--------PRNPALPLHHRRRELITTASTVYADAQPRGVSSSMHIA 439
G +PR + TS R P A P H R + + A QP SS + +
Sbjct: 203 GSTPRGSSASTSPRTPATARGAPAGAAWPRHRDRTQALHVFGAAAAAGQP-SASSLVSRS 261
Query: 438 PPSITNPLSILGSMTRINGGANGKFSGNTKCKRMFGMCSSRR---SVARS 298
PS+T P S G++ R GA G S + ++RR SVARS
Sbjct: 262 RPSLTAPSS--GALQRATPGAAGTSSPRSTAPACQQPAATRRGANSVARS 309
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Frame = +2
Query: 356 FPENFPFAPPFMRVIEPRIDKGFVMEGGAICMELLTPRG------------WASAYTVEA 499
FP+N+P +PP +R V G +C+ +L P G W +TVE+
Sbjct: 63 FPQNYPNSPPTVRFTSEMWHPN-VYPDGRVCISILHPPGDDPNGYELASERWTPVHTVES 121
Query: 500 VVMS 511
+V+S
Sbjct: 122 IVLS 125
>02_04_0582 - 24076614-24076643,24076961-24077440
Length = 169
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 569 PANSRGDGPKKRSAPS*KLTTNTAGSHP 652
PA RG G K SAPS T TA +HP
Sbjct: 96 PAPRRGGGKKPSSAPSPSSTVATAPAHP 123
>07_03_1012 +
23295976-23296264,23296475-23296548,23296972-23296996,
23297486-23297568,23297653-23297685,23298322-23298469,
23298625-23298722
Length = 249
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 344 LHLVFPENFPFAPPFMRVIEPRIDKGFV 427
L +VFP ++PF PP I+KGFV
Sbjct: 107 LDIVFPIDYPFKPPMGITKVMNIEKGFV 134
>04_04_0994 +
29980076-29980441,29980900-29980998,29981075-29981612,
29982211-29982494,29983014-29983034,29983238-29983452,
29983538-29983691,29984089-29984220
Length = 602
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 HQIDPESDLATDLRELHIPNILLHLVFPENFP-FAPPFMRVIEPRIDKGFV 427
H D DL R H+P ILL + P +P PP + ++K V
Sbjct: 185 HDTDASDDLVYKFRVEHLPPILLTCLLPSPYPSHQPPLFTISAEWMNKMMV 235
>03_05_0725 +
27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 296 SDLATDLRELHIPNILLHLVFPENFPFAPPFMRVIE-PRIDKGFVMEGGAIC 448
S ++ + LHI +LL + N PF F++ IE +I +G+ + A C
Sbjct: 330 SKISKNCGPLHIGYMLLEEIAQTNIPFQDYFVKFIELDKITRGWAQDRSAQC 381
>01_01_0261 + 2119519-2121033
Length = 504
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 483 ADAQPRGVSSSMHIAPPSITNPLSILGSMTRINGGANGK 367
A A PR V S H +PP T L + S++R + +
Sbjct: 17 AAASPRPVLSRRHASPPLATETLDVAASLSRARAAVSAE 55
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 280 VQPHVPLEKLSLTSSTVNTGSG 215
+ P PLEK+SL S V+TG G
Sbjct: 187 INPKAPLEKMSLLSCGVSTGVG 208
>08_02_1044 + 23913849-23915090
Length = 413
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -2
Query: 162 YALQLPDHVLRWLPVLSFLQVRLRPGLAGTLVVASAGPTPSLKRLVQCRQS 10
Y L+LPDHVLR +++ ++R L A+AG R V+ QS
Sbjct: 298 YTLRLPDHVLR--EIVTSARLRRTTSLQSFRTTAAAGGGARAGRSVRLGQS 346
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 591 PSPREFAGGTSRRPRN-PALPLHHRRRELITTASTVYADAQPRGVSSSMHIAPPSITN 421
P PR A T RR R+ PA P RRR A T R + A P +TN
Sbjct: 3 PLPRPAAAATPRRHRHGPATPRRRRRRHAAAVA-TPPPPPPRRRANRCPDAATPPLTN 59
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -2
Query: 543 PALPLHHRRRELITTASTVYADAQPRG-VSSSMHIAPP 433
P P RRR A+ +PRG +SS H APP
Sbjct: 162 PQEPAKRRRRNTAAAATARRGRGRPRGATASSAHSAPP 199
>01_01_0881 -
6908939-6909190,6909298-6909351,6909588-6909734,
6909836-6910042,6910664-6911098
Length = 364
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 332 ECAVLVGPW-QD-HSLDRSGAASRATRKIVVDKLHRKHRVGS--ALLQPFDFLQFLHKTS 165
E AV GP QD + +GA + ATR++ V L KHR G ++ +D+ +H S
Sbjct: 25 ESAVYGGPRPQDVGAAAGAGAGAGATRRVTVTTLRGKHRRGEPITVVTAYDYPSAVHVDS 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,390,335
Number of Sequences: 37544
Number of extensions: 473982
Number of successful extensions: 1530
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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