Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0702.Seq
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0072 - 784922-785567,785673-786406                               34   0.11 
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888...    31   1.3  

>04_01_0072 - 784922-785567,785673-786406
          Length = 459

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = +2

Query: 335 EWSRQSSVSIEKVHIFFGSKHGPSTL*DYNSHEKLLEYEQSENIFAQHDQF 487
           EW  + S SI+   I  G   GP TL D N+ E+  EYE   N     D+F
Sbjct: 303 EWVCKDSCSIQPCQIIDGP--GPWTLQDINNQERGFEYEDGNNEAVVEDRF 351


>11_06_0621 +
           25587476-25587604,25588230-25588423,25588800-25588874,
           25589434-25591852
          Length = 938

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 181 ASHDYTHVFIIYCTISYSRRRRPTSHRNTSEKHLISIQLINYQLIP 44
           ASH + H+ +   T+SY  R +  + + T   +   +Q  N Q +P
Sbjct: 17  ASHPHPHILLAVVTVSYPNRGKVDAAKETLNPNFPFVQFSNPQPVP 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,531,339
Number of Sequences: 37544
Number of extensions: 350131
Number of successful extensions: 703
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)