Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0700.Seq
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 180 1e-46
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 169 3e-43
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 148 7e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 145 5e-36
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 109 4e-25
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.018
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.39
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.90
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.6
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 3.6
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 6.4
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 8.4
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 8.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 180 bits (439), Expect = 1e-46
Identities = 92/161 (57%), Positives = 109/161 (67%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P +TIFDAKRLIGRKF+D VQ+DMKHWP +V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
VL KM+ETAEAYLG V +AV+TVPAY + + K
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIA 180
Query: 608 XXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TA
Sbjct: 181 YGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATA 221
Score = 112 bits (270), Expect = 4e-26
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62
Score = 72.5 bits (170), Expect = 6e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 621
NDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 169 bits (412), Expect = 3e-43
Identities = 87/161 (54%), Positives = 106/161 (65%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P +TIFDAKRLIGR+F D VQ+DMKHWP +V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
VL KM+E+AEA+LG V +AV+TVPAY + + K
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIA 180
Query: 608 XXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TA
Sbjct: 181 YGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATA 221
Score = 112 bits (270), Expect = 4e-26
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62
Score = 73.3 bits (172), Expect = 3e-14
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGYWRT 639
NDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ T
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHET 191
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 148 bits (359), Expect = 7e-37
Identities = 77/161 (47%), Positives = 98/161 (60%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR++ED Q D+KHWP +V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
VLTKMKE +EA L K V+ AVITVPAY + K
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIA 184
Query: 608 XXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
K +NVLIFDLGGGTFDVS+L I+ G+FEV +TA
Sbjct: 185 YGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATA 225
Score = 100 bits (240), Expect = 2e-22
Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-N 254
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 255 TQY 263
T +
Sbjct: 68 TVF 70
Score = 69.3 bits (162), Expect = 5e-13
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K
Sbjct: 153 SDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAK 190
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 145 bits (352), Expect = 5e-36
Identities = 71/161 (44%), Positives = 109/161 (67%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFD KRLIGRKF++ T+ D+K +P +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
+L+KMK+TAEAYLGK V +AV+TVPAY + + K ++A +N
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK-DAGTIAGLNVIRIVNEPTAAAI 212
Query: 608 XXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
K E++++++DLGGGTFDVS+L+I++G+FEV +T+
Sbjct: 213 AYGLDKTDTEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATS 253
Score = 98.7 bits (235), Expect = 7e-22
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-NT 257
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 258 QYSM 269
+ +
Sbjct: 98 IFDI 101
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 109 bits (262), Expect = 4e-25
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T F KRLIGR+F++ VQ D+K P ++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
+L+KM+ETA YLGK V+NAV+TVPAY + Q A + ++
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYF-----NDSQRQATKAAGAIAGLNVLRVVNEPT 221
Query: 608 XXXXKKGTGERN---VLIFDLGGGTFDVSILTIEDGIFEVKST 727
G ++N V +FDLGGGTFD+SIL + +G+FEV+ST
Sbjct: 222 AAALAYGLDKKNDAIVAVFDLGGGTFDISILELNNGVFEVRST 264
Score = 73.7 bits (173), Expect = 2e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 246 NPNTQY 263
NP +
Sbjct: 109 NPENTF 114
Score = 71.3 bits (167), Expect = 1e-13
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
NDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK
Sbjct: 195 NDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK 232
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 245
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 246 N 248
N
Sbjct: 63 N 63
Score = 50.0 bits (114), Expect = 3e-07
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQ-ADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
++T+ KRL GR ++D ++ + ++ G KV Y E+ F ++ +
Sbjct: 65 RNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAA 124
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
TK+K AEA L +V + VI++PA+ ++ + ++ ++A MN
Sbjct: 125 YFTKIKAIAEAELIGSVSDVVISIPAWFTDIQ-RRALLEAANIAGLNPLRLMNDNAAAAL 183
Query: 608 XXXXKK-----GTGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 727
K R V I D G + VSI+ G F +KST
Sbjct: 184 TYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKST 228
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 514 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 621
D QR+A +A I+GLN LR++N+ AAA+ YG+ K
Sbjct: 154 DIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 248
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
Score = 31.9 bits (69), Expect = 0.097
Identities = 20/110 (18%), Positives = 47/110 (42%)
Frame = +2
Query: 389 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TF 568
++K E S L ++ E+AE +LG V V++VP Y + K +
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPV 193
Query: 569 SESSMNXXXXXXXXXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 718
+ + ++ ++ V++ + G +VS+++++ G+ +
Sbjct: 194 LQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTI 243
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 34.3 bits (75), Expect = 0.018
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFF-VKTVSNRSSSRFIDDSENVQARDGTC 541
+S IP+S +S + S IS+ P F V ++ + S+S S ++ + +
Sbjct: 542 SSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSS 601
Query: 540 IFCGLSLRVIEYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL------- 382
F S + I++ T+L + S + +S+ + S +LSS +
Sbjct: 602 TFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISS 661
Query: 381 ----YATLILGLPPSLTTSIGQCFMSACTVASSNLRPMRRLASNIVCWGSS 241
Y++ ++ +L +S +S+ VASS+ P+ +S + + +S
Sbjct: 662 SLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.39
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNT 257
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82
Query: 258 QYSMPNV 278
+S+ NV
Sbjct: 83 AHSIRNV 89
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRK-FEDATVQADMKHWPIEVVSDGGKPKIKVAYK-GEDKTFFPEEVS 421
P H+I + K L+ E VQ +P + + + +++ +++ + EE+
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141
Query: 422 SMVLTKMKETAEAYLGKTVQNAVITVPAY 508
+M + AE + + + V+TVP +
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPH 170
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.90
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 73 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 168
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 2.8
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Frame = -1
Query: 663 PRSKISTFRSPVPFFVKTVSNRS----SSRFIDDSENVQARDGTCIFCGLSLRVIEYAGT 496
P + S S P TV N S SS ++ S + + ++ + + T
Sbjct: 3239 PITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSST 3298
Query: 495 VITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSIGQCFMS 316
IT+ T+ S + S+ +TSS S+P+ ++ +L ++T+S S
Sbjct: 3299 PITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSS--SILNS 3356
Query: 315 ACTVASSN-LRPMRRLASNIVCWGSSP 238
+ V SS+ L + S+ V S+P
Sbjct: 3357 STPVTSSSVLNSSTPITSSTVVNSSTP 3383
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 669 PPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARD 550
P + K+ +F P F+ TVS+R + F DD E+ R+
Sbjct: 93 PGFKDKLDSFLQPARDFLHTVSDRLDNIF-DDDEDEHVRE 131
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 177 PSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLC 311
P +A T ER++ AAK A+N Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 159 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 1
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 660 RSKIST-FRSPVPFFVKTVSNRSSSRFIDDSENVQAR 553
RS I T ++S FF+ + +R S F +D +NV+ +
Sbjct: 1377 RSAIGTVYKSIFKFFLDSFDSRRSLLFAEDVDNVETQ 1413
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 222 AAKNQVAMNPNTQYSMPNVSSDVSSKML 305
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,210,337
Number of Sequences: 5004
Number of extensions: 69545
Number of successful extensions: 254
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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