Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0700.Seq
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 185 3e-47
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 182 4e-46
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 159 2e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 86 3e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 3e-07
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 34 0.10
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 34 0.14
SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3) 32 0.55
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 31 0.73
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.96
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.2
SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77) 30 2.2
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_12578| Best HMM Match : DUF488 (HMM E-Value=9.4) 29 2.9
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.9
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.1
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 28 6.8
SB_19206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_1554| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 28 9.0
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 28 9.0
SB_3627| Best HMM Match : DUF488 (HMM E-Value=8) 28 9.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 185 bits (451), Expect = 3e-47
Identities = 95/162 (58%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGRKF+D V DM HWP V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
VLTKMKETAEAYLG V +AV+TVPAY + + K ++A +N
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK-DAGTIAGLNVLRIINEPTAAAI 181
Query: 608 XXXXKKGTG-ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
K G ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTA
Sbjct: 182 AYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTA 223
Score = 132 bits (319), Expect = 3e-31
Identities = 63/68 (92%), Positives = 65/68 (95%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 243 MNP-NTQY 263
MNP NT +
Sbjct: 61 MNPENTVF 68
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 182 bits (442), Expect = 4e-46
Identities = 97/163 (59%), Positives = 119/163 (73%), Gaps = 2/163 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR+++DATVQ+DMK WP +++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
VL KMKETAEAYLG+ V +AVITVPAY + + K ++A +N
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK-DAGTIAGLNVLRVINEPTAAAL 181
Query: 608 XXXXKKG-TGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTA 730
K +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTA
Sbjct: 182 AYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTA 224
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 243 MNP 251
+NP
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 159 bits (387), Expect = 2e-39
Identities = 81/160 (50%), Positives = 109/160 (68%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR ++D +VQ D+K +P +VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
VLTKMKETAEAYLGK V +AV+TVPAY + + K ++A +N
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK-DAGAIAGLTVMRIINEPTAAAI 879
Query: 608 XXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 727
K GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T
Sbjct: 880 AYGMDKKEGEKNILVFDLGGGTFDVSLLTIDNGVFEVVAT 919
Score = 100 bits (239), Expect = 1e-21
Identities = 48/63 (76%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP-N 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 255 TQY 263
T +
Sbjct: 764 TVF 766
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (314), Expect = 1e-30
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 243 MNP 251
MNP
Sbjct: 61 MNP 63
Score = 112 bits (270), Expect = 2e-25
Identities = 63/112 (56%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 418
P +TIFDAKRLIGR+F+D V+ DMKHW EVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 419 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174
Score = 96.7 bits (230), Expect = 2e-20
Identities = 56/105 (53%), Positives = 64/105 (60%)
Frame = +2
Query: 413 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXX 592
++SSMVL KMKETAEAYLG V +AV+TVPAY + + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 593 XXXXXXXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 727
KK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKST 315
Score = 77.4 bits (182), Expect = 1e-14
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
NDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKK 281
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 511 NDSQRQATKDAG 546
NDSQRQATKDAG
Sbjct: 176 NDSQRQATKDAG 187
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 85.8 bits (203), Expect = 3e-17
Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 424
P++TI+DAKR IG+ F + K + V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 604
V+ K++ AE L TV AV++VPA +K + ++ SLA +N
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLAGITVLRVINEPTAAA 210
Query: 605 XXXXXKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
K G NV++ DLGGGT DVS+L I+ G+F + A
Sbjct: 211 LAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMA 252
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 243 MNP-NTQY 263
+NP NT Y
Sbjct: 90 INPKNTIY 97
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 520 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
QR AT A +++G+ VLR+INEPTAAA+AYGL KK
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK 218
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 73.3 bits (172), Expect = 2e-13
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPIEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSM 427
++TI KR IGRKF D VQ ++ H P +VV I+V Y G+ + F PE+V +M
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 607
+ T++K TAE L V + VI+VP+Y T + + + + A MN
Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY-YTDRQRRCMLDASATAGLNCLRLMNDTTAVSL 238
Query: 608 XXXXKK----GTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 730
K RNV+ D+G + V I G +V STA
Sbjct: 239 AYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTA 283
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 236
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1
Query: 514 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 368 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 24/61 (39%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 618
ND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 619 K 621
K
Sbjct: 110 K 110
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = +2
Query: 644 VLIFDLGGGTFDVSILTIEDGIFEVKST 727
+ ++DLGGGTFD+SIL I+ G+FEVK+T
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKAT 29
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 132 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNP-NTQYSMPNVSSDVSSKM 302
G IIAND G+R TP+ VAF+DTE+LI +V N N Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 303 L 305
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 615
N ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 362 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 34.3 bits (75), Expect = 0.10
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Frame = -1
Query: 723 DFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGT 544
+ T +PS+ V +T+ +P P + + + P +V ++ SS + S T
Sbjct: 96 NITMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----ST 150
Query: 543 CIFCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLI 367
+ +S ++ Y TVI T T L + S + VS + TSS + + + + +++
Sbjct: 151 TLIPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQ 210
Query: 366 LGLPPSLTTSIGQCFMSACTVA 301
L + + T ++ + T A
Sbjct: 211 LNITSNTTMAVNDTLRTTSTSA 232
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 299 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 353
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 354 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 413
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 414 ITSNTTMAVNDTLRTTSTSA 433
Score = 31.9 bits (69), Expect = 0.55
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + ++ T +
Sbjct: 500 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSL-----TRSLLSTTL 554
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + T S + + + + +++ L
Sbjct: 555 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTPSIESTIMASVASSIQLN 614
Query: 360 LPPSLTTSIGQCFMSACT--VASSNLRPMRRLASNIVCWGSS 241
+ + T ++ + T V + + P + S I+ S+
Sbjct: 615 ITSNTTMAVNDTLRTTSTSAVFPTTITPSPNITSYILLMTSA 656
Score = 31.9 bits (69), Expect = 0.55
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + ++ T +
Sbjct: 701 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSL-----TRSLLSTTL 755
Query: 537 FCGLSLRVIEYAGTVITAFCTVLPR*ASAVSFIFVSTME---LTSSGKKVLSSPLYATLI 367
+S ++ Y TVI T A S I +S++ T S V + + T I
Sbjct: 756 IPSISTSILPYNTTVIATPNTT----RIATSVILLSSLNDTIRTRSTSVVFETTMKRTQI 811
Query: 366 -LGLPPSLTTSIGQCFMSACTVASSNLRP 283
G PP +T+S +SA +V + P
Sbjct: 812 TTGYPPLMTSSAVASSISATSVVVDSTTP 840
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 34.3 bits (75), Expect = 0.10
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 209 TMILPSTSVPYNTTLIPGPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 263
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 264 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 323
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T + + T A
Sbjct: 324 ITSNTTVEVNDTLRTTSTTA 343
Score = 32.3 bits (70), Expect = 0.42
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T PS+ V +T+ +P P + + + P +V ++ SS + ++ T +
Sbjct: 8 TMIFPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSL-----ARSLLSTTL 62
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 63 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSVISTTSSIESTIMASVASSIQLN 122
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 123 ITSNTTMAVNDTLRTTSTSA 142
Score = 28.7 bits (61), Expect = 5.1
Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 611 TMIFPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 665
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ + TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 666 IPSISTSILPHNTTVIATPNTTRLVTSTISSSTVNVSDISTTSSIESTIMASVASSIQLN 725
Query: 360 LPPSLTTSI 334
+ + T ++
Sbjct: 726 ITSNTTMAV 734
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 98 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 152
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 153 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 212
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 213 ITSNTTMAVNDTLRTTSTSA 232
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 299 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 353
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + +++ L
Sbjct: 354 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMESVASSIQLN 413
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 414 ITSNTTMAVNDTLTTTSTSA 433
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 1304 TMILPSTSVPYNTTLIPGPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 1358
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 1359 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 1418
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 1419 ITSNTTMAVNDTLRTTSTSA 1438
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + ++ T +
Sbjct: 701 TMILPSTSVPYNTTFIPAPNATSTAATTMSPSYVANMTTLDSSVSL-----TRSLLSTTL 755
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 756 IPSISTSILPYNTTVIATPNTTRLATSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 815
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 816 ITSNTTMAVNDTLRTTSTSA 835
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + ++ T +
Sbjct: 902 TMILPSTSVPYNTTLIPGPNATSTAATTMSPTYVANMTTLDSSVSL-----TRSLLSTTL 956
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 957 IPSISTSILPYNTTVIATPNTTRLVTSMISSSTVNVSAISTTSSIESTIMASVASSIQLN 1016
Query: 360 LPPSLTTSIGQCFMSACT 307
+ + T ++ +A T
Sbjct: 1017 ITSNTTMAVNDTLRTAST 1034
Score = 32.7 bits (71), Expect = 0.32
Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + + ++ + T +
Sbjct: 500 TMILPSTSVPYNTTFIPSPNATSTAATTMSPSYVSNMTTLDSS--VSFTRSLLS---TTL 554
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + +++ L
Sbjct: 555 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMESVASSIQLS 614
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 615 ITSNTTMAVNDTLKTTSTSA 634
Score = 32.7 bits (71), Expect = 0.32
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + ++ T +
Sbjct: 1103 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSL-----TRSLLSTTL 1157
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + + +++ L
Sbjct: 1158 IPSISTSMLPYNTTVIATPNTTRLATSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 1217
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 1218 ITSNTTMAVNDTLRTTSTSA 1237
Score = 31.1 bits (67), Expect = 0.96
Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ S+ + S T +
Sbjct: 1505 TMILPSTSVPYNTTLIPGPNATSTAATTMSPSYVANMTTLDSTVSLTRSSL-----STTL 1559
Query: 537 FCGLSLRVIEYAGTVITA-FCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+ ++ Y TVIT T L + S + VS + TSS + + + + +++ L
Sbjct: 1560 IPSIRTSILPYIKTVITTPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQLN 1619
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 1620 ITSNTTMAVNDTLRTTSTSA 1639
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T +P P + + + P +V ++ SS + ++ T +
Sbjct: 1706 TMILPSTSVPYNTMFIPAPNATSTAATTMSPSYVANMTTLDSSVSL-----TRSLLSTTL 1760
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TSS + + + +++ L
Sbjct: 1761 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIESTIMESVASSIQLN 1820
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + ++ + T A
Sbjct: 1821 ITSNTMMAVNDTLKTTSTSA 1840
>SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3)
Length = 485
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 729 AVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNR 598
+V S+IP S + VPPPRS ++ +P PFF +V R
Sbjct: 43 SVQIDSQIPGSTFQTVLHPVPPPRS-VAMDNAPKPFFEMSVLTR 85
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 31.5 bits (68), Expect = 0.73
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = -1
Query: 717 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCI 538
T +PS+ V +T+ +P P + + + P +V ++ SS + S T +
Sbjct: 282 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSL-----STTL 336
Query: 537 FCGLSLRVIEYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILG 361
+S ++ Y TVI T T L + S + VS + TS + + + + +++ L
Sbjct: 337 IPSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSLIESTIMASVASSIQLN 396
Query: 360 LPPSLTTSIGQCFMSACTVA 301
+ + T ++ + T A
Sbjct: 397 ITSNTTMAVNDTLRTTSTSA 416
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 141 EIIANDQGNRTTPSYVAFT-DTERL 212
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 644 VLIFDLGGGTFDVSILTIEDGIFEVK 721
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 359 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQK 538
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 539 MQ 544
Q
Sbjct: 714 SQ 715
>SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77)
Length = 549
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 630 VPFFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTV 493
V + +K S R + VQ+ D CI+C L V+EYA V
Sbjct: 400 VEYVIKKASKRLYALRSLKKSGVQSNDLVCIYCVLIRAVLEYAAPV 445
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 650 IFDLGGGTFDVSILTIEDGIFEV 718
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPIEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P H I A R++GRK +++++D I+V KP + K F P+ ++S+
Sbjct: 572 PSHEIAQAWRILGRKSSRSSLESDTLE--IKVDPKDSKPTKRNILKQVASVFDPQGLASL 629
Query: 428 VLTKMK 445
+ + K
Sbjct: 630 FVLRAK 635
>SB_12578| Best HMM Match : DUF488 (HMM E-Value=9.4)
Length = 249
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -1
Query: 702 SSMVRMDTSKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLS 523
S + R+++ K+ S +S + V + VK + R + + V +D I+C L
Sbjct: 76 SVIKRVESYKIVHISSDLS-WNKHVDYVVKKANKRLYALRLLKKSGVPVQDLVAIYCVLI 134
Query: 522 LRVIEYAGTV 493
V+EYAG V
Sbjct: 135 RSVVEYAGPV 144
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 249 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 151
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 9 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 95
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 50 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 226
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 227 QEPGGDEPQHTIFDA 271
G +P++T F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 481 ECSYHGSRVLNDSQRQATKDAG-TISGLNVLRI 576
ECS+ GS+V+N S+R DAG ++G++ RI
Sbjct: 678 ECSF-GSKVINSSKRITIYDAGFQVTGISPSRI 709
>SB_19206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 630 VPFFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTVIT 487
V + VK + R + + V +D I+C L V+EYAG V T
Sbjct: 28 VDYVVKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWT 75
>SB_1554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 663 PRSKIS-TFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTV 493
P+ KI ++ V VK S R + + VQ D I+C L V+EYA V
Sbjct: 12 PQDKIGVSWNVHVDHIVKKASKRLYALRVLRKAGVQQSDMVLIYCSLIRSVLEYAAPV 69
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 427 GAYENEG-NCRSLSWQNCAECSYHGSRVLNDSQRQAT--KDAGTISGLNVLRIINEP 588
GA +N + SL W C + YHG +V+ + A AG S NV+R + P
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP 568
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 732 PAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 625
PA+ S +PS V +D VP P I+ + VP
Sbjct: 270 PAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 259 CVLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 80
C+L I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
>SB_3627| Best HMM Match : DUF488 (HMM E-Value=8)
Length = 188
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 660 RSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTV 493
++K ++ V + VK + R + + V +D I+C L V+EYAG V
Sbjct: 28 QNKDLSWNKHVDYVVKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVLEYAGPV 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,078,754
Number of Sequences: 59808
Number of extensions: 579435
Number of successful extensions: 1870
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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