Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0699.Seq
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein. 82 7e-16
AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p pro... 82 7e-16
AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB... 82 7e-16
BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p pro... 72 1e-12
AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA... 72 1e-12
AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC... 48 1e-05
>S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein.
Length = 608
Score = 82.2 bits (194), Expect = 7e-16
Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +3
Query: 75 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 251
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66
Query: 252 W*Q 260
+ Q
Sbjct: 67 YLQ 69
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 631 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN 726
K+P++ DL +LA A L NN+K RMNCVVER++
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERKH 191
Score = 35.9 bits (79), Expect = 0.061
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LGNLYIGFELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 370
LG+ + + A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
>AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p
protein.
Length = 608
Score = 82.2 bits (194), Expect = 7e-16
Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +3
Query: 75 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 251
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66
Query: 252 W*Q 260
+ Q
Sbjct: 67 YLQ 69
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 631 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN 726
K+P++ DL +LA A L NN+K RMNCVVER++
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERKH 191
Score = 35.9 bits (79), Expect = 0.061
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LGNLYIGFELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 370
LG+ + + A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
>AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB,
isoform B protein.
Length = 608
Score = 82.2 bits (194), Expect = 7e-16
Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +3
Query: 75 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 251
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66
Query: 252 W*Q 260
+ Q
Sbjct: 67 YLQ 69
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 631 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN 726
K+P++ DL +LA A L NN+K RMNCVVER++
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERKH 191
Score = 35.9 bits (79), Expect = 0.061
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LGNLYIGFELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 370
LG+ + + A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 58 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
>BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p
protein.
Length = 617
Score = 71.7 bits (168), Expect = 1e-12
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 9/71 (12%)
Frame = +3
Query: 75 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 227
SMAT+ MKP+Y SEVYST SEPPP + H R + SV+IAKI A T++ S+FIL
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67
Query: 228 GTFILASSW*Q 260
G+FILASS+ Q
Sbjct: 68 GSFILASSYLQ 78
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 631 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN 726
K+P++ DL +LA A L NN+K RMNCVVER++
Sbjct: 169 KMPLELDLSDLAAAILRNNRKSRMNCVVERKH 200
Score = 35.9 bits (79), Expect = 0.061
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LGNLYIGFELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 370
LG+ + + A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 67 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 115
>AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA,
isoform A protein.
Length = 617
Score = 71.7 bits (168), Expect = 1e-12
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 9/71 (12%)
Frame = +3
Query: 75 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 227
SMAT+ MKP+Y SEVYST SEPPP + H R + SV+IAKI A T++ S+FIL
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67
Query: 228 GTFILASSW*Q 260
G+FILASS+ Q
Sbjct: 68 GSFILASSYLQ 78
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 631 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN 726
K+P++ DL +LA A L NN+K RMNCVVER++
Sbjct: 169 KMPLELDLSDLAAAILRNNKKSRMNCVVERKH 200
Score = 35.9 bits (79), Expect = 0.061
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LGNLYIGFELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 370
LG+ + + A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 67 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 115
>AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC,
isoform C protein.
Length = 625
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 631 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN 726
K+P++ DL +LA A L NN+K RMNCVVER++
Sbjct: 177 KMPLELDLSDLAAAILRNNKKSRMNCVVERKH 208
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +3
Query: 147 AYRHRVSTSVQIAKIAALTVVASSFILGTFILASSW*Q 260
AY+ R + SV+IAKI A T++ S+FILG+FILASS+ Q
Sbjct: 50 AYK-RQANSVKIAKITAFTIIVSAFILGSFILASSYLQ 86
Score = 35.9 bits (79), Expect = 0.061
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LGNLYIGFELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPL 370
LG+ + + A++SC Q++ LD++L+KEL LE L EPL
Sbjct: 75 LGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,048,765
Number of Sequences: 53049
Number of extensions: 717402
Number of successful extensions: 2664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2653
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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