Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0699.Seq
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   3.6  
Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U97008-1|AAB52310.1|  370|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z49969-3|CAA90267.1|  792|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical
           protein D2030.6 protein.
          Length = 824

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
 Frame = +2

Query: 170 FGPDREDCSTNSGRFLLHLGNLYIGFELVAA-RSSCHQLEQLDAMLD--KELALEGRA-- 334
           F  +   C  N  R    +  +Y G  ++    +  H+  +LD  +    E   +G++  
Sbjct: 224 FHKELRSCQNNPQRVQEKMNEMYGGTTIITRYNNKLHRYTRLDYSISPLSEFVKDGQSIT 283

Query: 335 --------YGNDALVADEPLPLANAHALH-GVPPMLSSVLPETSQPSSSRPSLFKD 475
                   YG +  V D+P+ ++       G PP +S ++PE   P+     + KD
Sbjct: 284 LKEYFKNQYGIEITVDDQPIIISEGKPKQPGEPPQVSYIVPELCFPTGLTDEMRKD 339


>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 45  VVMEKEHQPDSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSV 176
           +V++K   P ++AT T KP    PP      SEPPPA++    +S+
Sbjct: 275 IVVKKLQAPIALATSTPKPAMCRPPKH----SEPPPAFQDSFVSSI 316


>Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +2

Query: 302 LDKELALEGRAYGN-DALVADEPLPL---ANAHALHGVPPMLSSVLPETSQPSSSR 457
           L + L+ E R+Y + + L+  E  P+   +N  +L       SS+L +T QPSSSR
Sbjct: 8   LQRSLSHEMRSYSSLNPLLPSEDTPIQSFSNGVSLEEGKQASSSLLRDTGQPSSSR 63


>Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +2

Query: 302 LDKELALEGRAYGN-DALVADEPLPL---ANAHALHGVPPMLSSVLPETSQPSSSR 457
           L + L+ E R+Y + + L+  E  P+   +N  +L       SS+L +T QPSSSR
Sbjct: 8   LQRSLSHEMRSYSSLNPLLPSEDTPIQSFSNGVSLEEGKQASSSLLRDTGQPSSSR 63


>U97008-1|AAB52310.1|  370|Caenorhabditis elegans Hypothetical
           protein C03G6.10 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 407 PMLSSVLPETSQPSSSRPSLFK---DDALNHAESKINKTNCRKLTTI 538
           P   + + E+ +P +S PS  K   ++ LNH  +K   T C  LTT+
Sbjct: 150 PTFENSVHESFEPKNSLPSSLKAVQNNKLNHCPTKKIWTLCNLLTTV 196


>Z49969-3|CAA90267.1|  792|Caenorhabditis elegans Hypothetical
           protein W01C9.3 protein.
          Length = 792

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +2

Query: 329 RAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALN-HAESKI 505
           + Y ND  +   P P     +L  +PP  S  +   + P+ S PS  K    N  ++S +
Sbjct: 111 KVYSNDPRLVSIPRPAGTIPSLGSMPPSRSGSI--ITGPNPSPPSSQKRKNKNKESKSSL 168

Query: 506 NKTNCRKLTTIR 541
           NK    +L  ++
Sbjct: 169 NKPKRNRLQELK 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,923,594
Number of Sequences: 27780
Number of extensions: 346704
Number of successful extensions: 1208
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)