Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0699.Seq
         (767 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g62010.1 68416.m06964 expressed protein                             31   0.85 
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi...    31   0.85 
At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein si...    31   1.1  
At2g11620.1 68415.m01249 hypothetical protein                          31   1.1  
At5g42830.1 68418.m05219 transferase family protein similar to a...    30   1.5  
At1g27430.1 68414.m03343 GYF domain-containing protein contains ...    29   3.4  
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR...    29   4.5  
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ...    29   4.5  
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta...    29   4.5  
At5g55690.1 68418.m06943 MADS-box protein (AGL47)                      28   7.9  
At3g09510.1 68416.m01130 hypothetical protein                          28   7.9  

>At3g62010.1 68416.m06964 expressed protein
          Length = 1254

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 278 QLEQLDAMLDKELALEGRAYGNDALVADE 364
           ++EQ++A L +++ +E   YGN  LV DE
Sbjct: 124 RVEQMEARLKEDILMEASRYGNKILVTDE 152


>At1g01440.1 68414.m00059 extra-large G-protein-related weak
           similarity to extra-large G-protein  (AtXLG1)
           (GI:3201682) [Arabidopsis thaliana]
          Length = 664

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = +2

Query: 281 LEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPE 433
           L +LD++ D  L    R  GN+A V D+P P+   HA HG PP   +  PE
Sbjct: 89  LRKLDSIKDHLL----RGGGNNATVVDQP-PMG-FHAHHGPPPSYYNPYPE 133


>At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein
           similar to GTPase activating protein [Yarrowia
           lipolytica] GI:2370595; contains Pfam profile PF00566:
           TBC domain
          Length = 554

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 214 PPSSWEPLYWLRVGSSSFIMPSARAAGCNARQRTR 318
           PPSS     W+++ S+ F++ S+  A C+ R R +
Sbjct: 23  PPSSSSSSSWIQIRSALFVVASSSPASCSDRPRLK 57


>At2g11620.1 68415.m01249 hypothetical protein 
          Length = 491

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 48  VMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVS 167
           V+  +   + M  + MKPE PP ++Y   +P P  +   S
Sbjct: 253 VLRYDGNNNGMQGVLMKPEKPPQDLYGQCQPQPQIQRNFS 292


>At5g42830.1 68418.m05219 transferase family protein similar to
           anthranilate N-hydroxycinnamoyl/benzoyltransferase,
           Dianthus caryophyllus [gi:2239091]; contains Pfam
           transferase family domain PF002458
          Length = 450

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 404 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINKTN--CRKLTTIRMTHQTRVMRVLS 577
           PP+L   +PE   P  S P    D+ +   ES I K    C    TIRM  +TRV ++  
Sbjct: 203 PPVLKRYIPEGYGPLFSLPYSHPDEFIRTYESPILKERMFCFSSETIRML-KTRVNQICG 261

Query: 578 PT 583
            T
Sbjct: 262 TT 263


>At1g27430.1 68414.m03343 GYF domain-containing protein contains Pfam
            profile: PF02213 GYF domain
          Length = 1531

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 477  SSLKRLGREDDGWLVSGNTED 415
            S ++RLG + + W+V G+T+D
Sbjct: 1148 SEIRRLGEDPNSWMVGGSTDD 1168


>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 141 PPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 251
           PP   H +S S+ + KI+   V  SSF+L T  +ASS
Sbjct: 7   PPRQTHYLS-SISLLKISISKVFVSSFLLLTLSMASS 42


>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
           like protein identical to SP|Q9S7R5 TWIN SISTER of FT
           protein (TFL1 like protein) {Arabidopsis thaliana};
           contains Pfam profile PF01161:
           Phosphatidylethanolamine-binding protein
          Length = 175

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 254 VAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHAL 394
           V + S+ HQ E L  ++    A  G A+GN+ +  + P P +  H +
Sbjct: 74  VPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRI 120


>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226: DnaJ domain
          Length = 797

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +2

Query: 245 FELVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGV--PPMLS 418
           ++L +  S   QL  L ++ D   A +     N +    +P P++  H    +  PP  S
Sbjct: 332 YQLSSRSSEAAQLSLLPSVSDSSHASQPTR-SNQSHAVSKPQPVSKPHPPFPMSQPPPTS 390

Query: 419 SVLPETSQPSSSRPSLFKDDALNHAESKINKTN 517
           +  P +  PS+S+P      + N     +++++
Sbjct: 391 NPFPLSQPPSNSKPFPMSQSSQNSKPFPVSQSS 423


>At5g55690.1 68418.m06943 MADS-box protein (AGL47) 
          Length = 277

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 512 TNCRKLTTIRMTHQTRVMRVLSPTVLLKRTTNLKRLDRCS-NCLFSL 649
           ++C K  T++   +    +V  PT+  K  T  K+LD+CS N L+++
Sbjct: 84  SSCTKTYTVQECLEKNNTKVEKPTIATKYPTWDKKLDQCSLNDLYAV 130


>At3g09510.1 68416.m01130 hypothetical protein
          Length = 484

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 438 ASRHLHDPVSSKTTHSTMPSPK*TRQIAEN 527
           A    HD +++  +H   PSP  TRQIAEN
Sbjct: 295 AKAETHDWLNATQSHKKTPSP--TRQIAEN 322


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,151,488
Number of Sequences: 28952
Number of extensions: 333014
Number of successful extensions: 1521
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)