Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0698.Seq
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016869-1|AAH16869.1|  344|Homo sapiens chromosome 20 open read...    59   1e-08
AL121585-6|CAC35072.1|  344|Homo sapiens chromosome 20 open read...    59   1e-08
AL121585-5|CAI14860.1|  264|Homo sapiens chromosome 20 open read...    59   1e-08
AK027503-1|BAB55160.1|  344|Homo sapiens protein ( Homo sapiens ...    59   1e-08
AL121585-7|CAI14861.1|  252|Homo sapiens chromosome 20 open read...    43   0.001

>BC016869-1|AAH16869.1|  344|Homo sapiens chromosome 20 open reading
           frame 72 protein.
          Length = 344

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +3

Query: 573 SVADVLKSISSPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIALTLR 752
           SV  +LK +S  +A+ES V H  L Y G+ D +A+Y+ K  +I+WK S+KP+  I  T  
Sbjct: 208 SVQHILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFD 267

Query: 753 QP 758
            P
Sbjct: 268 NP 269



 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = +1

Query: 349 PSVTLILNKTMTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTL 507
           PSVT +L +TMT++    LE+WKQ  I E+G + F  +       G +FH  L
Sbjct: 131 PSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEAL 183


>AL121585-6|CAC35072.1|  344|Homo sapiens chromosome 20 open reading
           frame 72 protein.
          Length = 344

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +3

Query: 573 SVADVLKSISSPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIALTLR 752
           SV  +LK +S  +A+ES V H  L Y G+ D +A+Y+ K  +I+WK S+KP+  I  T  
Sbjct: 208 SVQHILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFD 267

Query: 753 QP 758
            P
Sbjct: 268 NP 269



 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = +1

Query: 349 PSVTLILNKTMTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTL 507
           PSVT +L +TMT++    LE+WKQ  I E+G + F  +       G +FH  L
Sbjct: 131 PSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEAL 183


>AL121585-5|CAI14860.1|  264|Homo sapiens chromosome 20 open reading
           frame 72 protein.
          Length = 264

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +3

Query: 573 SVADVLKSISSPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIALTLR 752
           SV  +LK +S  +A+ES V H  L Y G+ D +A+Y+ K  +I+WK S+KP+  I  T  
Sbjct: 128 SVQHILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFD 187

Query: 753 QP 758
            P
Sbjct: 188 NP 189


>AK027503-1|BAB55160.1|  344|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14597 fis, clone NT2RM4002390. ).
          Length = 344

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +3

Query: 573 SVADVLKSISSPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIALTLR 752
           SV  +LK +S  +A+ES V H  L Y G+ D +A+Y+ K  +I+WK S+KP+  I  T  
Sbjct: 208 SVQHILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFD 267

Query: 753 QP 758
            P
Sbjct: 268 NP 269



 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = +1

Query: 349 PSVTLILNKTMTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTL 507
           PSVT +L +TMT++    LE+WKQ  I E+G + F  +       G +FH  L
Sbjct: 131 PSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEAL 183


>AL121585-7|CAI14861.1|  252|Homo sapiens chromosome 20 open reading
           frame 72 protein.
          Length = 252

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = +1

Query: 349 PSVTLILNKTMTEESRLALEKWKQERISEMGVEEFNRFYQAQM 477
           PSVT +L +TMT++    LE+WKQ  I E+G + F  +  + M
Sbjct: 131 PSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSSSM 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,701,460
Number of Sequences: 237096
Number of extensions: 2595967
Number of successful extensions: 5150
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5150
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)