Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0698.Seq
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M80537-1|AAA28530.1| 5147|Drosophila melanogaster fat protein pr...    29   5.3  
AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA ...    29   5.3  

>M80537-1|AAA28530.1| 5147|Drosophila melanogaster fat protein
           protein.
          Length = 5147

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 274 AQPGYPSEDKILQIKHHRNDYAEQYPSVTLILNKTMTEESRLALEKWKQERISEMGVEE 450
           +QP YP E +I  +  + N      PS+ +  +++ T  +RL L+      + E GV +
Sbjct: 134 SQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTD 192


>AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA
           protein.
          Length = 5147

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 274 AQPGYPSEDKILQIKHHRNDYAEQYPSVTLILNKTMTEESRLALEKWKQERISEMGVEE 450
           +QP YP E +I  +  + N      PS+ +  +++ T  +RL L+      + E GV +
Sbjct: 134 SQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTD 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,009,626
Number of Sequences: 53049
Number of extensions: 753558
Number of successful extensions: 1881
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1881
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)