Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0694.Seq
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 41 1e-04
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 41 1e-04
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 40 2e-04
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 37 0.003
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 32 0.087
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 31 0.12
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 29 0.46
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 28 1.1
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 28 1.4
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 1.4
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 27 3.3
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 7.6
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 7.6
SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual 25 7.6
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 10.0
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 25 10.0
SPAC644.08 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 25 10.0
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 25 10.0
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 330 IARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHD 476
+ARAL+ ++++ DEPT ALD + VM + R +G T +++THD
Sbjct: 581 LARALLRDTEILILDEPTSALDPITKNLVMDAIRAHR-KGKTTLVITHD 628
Score = 34.7 bits (76), Expect = 0.012
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 333 ARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDP 479
ARAL+ ++++ DE T ALDS S + + +++ TV+I+TH P
Sbjct: 1247 ARALLRNPRLLILDECTSALDSKSS---LLLEKTIQNLSCTVLIITHQP 1292
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +3
Query: 330 IARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTH 473
+ARA++ +IL DE T ALD+++ ++ A L++L G T I++ H
Sbjct: 731 VARAILKDPSIILLDEATSALDTNTERQIQAALNRLAS-GRTAIVIAH 777
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 330 IARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTH 473
IARAL+ +++L DE T ALDSHS + V L+ +G T + + H
Sbjct: 1269 IARALIRNPKILLLDEATSALDSHSEKVVQEALN-AASQGRTTVAIAH 1315
Score = 34.7 bits (76), Expect = 0.012
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 330 IARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTH 473
IARA+++ +++L DE T ALDS S V L R T I++ H
Sbjct: 578 IARAVISDPKILLLDEATSALDSKSEVLVQKALDN-ASRSRTTIVIAH 624
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 36.7 bits (81), Expect = 0.003
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 360 VILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDP 479
++ DEPT LDS S ++ L +L D G ++ H P
Sbjct: 1044 LLFLDEPTSGLDSQSAWSIVCFLRKLADAGQAILCTIHQP 1083
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 31.9 bits (69), Expect = 0.087
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 276 PYRVLSGTAFGWSATARHIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHT 455
P LSG GW +ARA++ ++L DEPT LD + + A L + T
Sbjct: 559 PVASLSG---GWKMKLE-LARAMLQKADILLLDEPTNHLDVANIAWLEAYL--TSQKNIT 612
Query: 456 VIIVTHD 476
+IV+HD
Sbjct: 613 CLIVSHD 619
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 31.5 bits (68), Expect = 0.12
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 354 GQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDP 479
G ++L DEP LDS S ++ IL +L G +++ P
Sbjct: 918 GSILLLDEPANGLDSQSAWMLVCILQKLARSGLSILCSVSQP 959
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 29.5 bits (63), Expect = 0.46
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 330 IARALMNGGQVILADEPTGALDSHSGEEVMAILHQL-RDRGHTVIIVTH 473
IARAL+ ++ DE T ALD + V + L +R T I + H
Sbjct: 630 IARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAH 678
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 330 IARALMNGGQVILADEPTGALDSHSGEEVMAILHQLR-DRGHTVIIVTHD 476
+ARA+ + ++L D+ ALD H+ + Q TVI+VTH+
Sbjct: 750 LARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTHN 799
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 306 GWSATARHIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHD 476
GW +ARAL ++L DEP+ LD S + + L+ + V++V+HD
Sbjct: 358 GWRMRLS-LARALFCQPDLLLLDEPSNMLDVPS---IAFLSEYLQTYKNIVLVVSHD 410
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 345 MNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHD 476
M ++L DEPT ALD + + A+ L + V+ +THD
Sbjct: 728 MTQPHILLLDEPTNALDI---DTIDALADALNNFDGGVVFITHD 768
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 259 VAQLLGTKQSLFPLKTSIDGGYFNVLLGG*MRKQMVTLENKAEMLAA 119
V ++GT S + ++ GYFNV +RKQ++ E E++ A
Sbjct: 319 VLSIIGTLLSRKEVNWTLTAGYFNVYPA--LRKQLLKSEGIGEVIVA 363
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 434 LMQDRHHLFARMAVQCAGWFIGKNYLTTV 348
+++ RH +F + C WF G L V
Sbjct: 804 IIRKRHLVFESRGICCQSWFTGNKLLCAV 832
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 63 IASPVRMLPRWTPMRWRNCAASISALFSS 149
I SP+ +P P++ +N ASI +L SS
Sbjct: 190 ILSPITDMPHLAPLQRKNSNASIHSLGSS 218
>SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 384 GALDSHSGEEVMAILHQLRDRGHTVIIVTH 473
G ++SH + + +L D GH VI++TH
Sbjct: 11 GGIESH----IFQLSQRLIDLGHKVIVITH 36
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 101 DALAQLRREHFGFIFQRYHLLSHLTAEQNVEV 196
++L + EH+GFI + ++H TA N V
Sbjct: 309 ESLYENEFEHYGFITYKSSYIAHDTARHNSRV 340
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 25.0 bits (52), Expect = 10.0
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 273 RPYRVLSGTAFGWSATARHIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH 452
+P + +SG GW ++RAL ++L DEPT LD E V+ + + L
Sbjct: 216 KPTKDMSG---GWRMRVA-LSRALFIKPSLLLLDEPTNHLDL---EAVVWLENYLAKYDK 268
Query: 453 TVIIVTH 473
+++ +H
Sbjct: 269 ILVVTSH 275
>SPAC644.08 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 25.0 bits (52), Expect = 10.0
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 511 FDHPLGLSSDCGSWVTII 458
+D +GL ++CGS+V I+
Sbjct: 142 YDTTIGLKTECGSYVKIV 159
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 321 LLLTTRKLCRIILCTVFQPQPLRNSWARSSR 229
LL+ + RI CTV P PLRN + S+
Sbjct: 22 LLIALESMFRI--CTVILPSPLRNWFYEQSK 50
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,814,854
Number of Sequences: 5004
Number of extensions: 57664
Number of successful extensions: 205
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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