Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0692.Seq
         (768 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ...    74   5e-12
UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2; ...    73   8e-12
UniRef50_A5BUD3 Cluster: Putative uncharacterized protein; n=1; ...    53   7e-06
UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185...    48   3e-04
UniRef50_A4EB57 Cluster: Putative uncharacterized protein; n=6; ...    44   0.004
UniRef50_A0FH78 Cluster: Antifreeze protein; n=1; Saussurea invo...    43   0.010
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease...    42   0.022
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    42   0.022
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    42   0.022
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    39   0.12 
UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=...    38   0.27 
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    36   1.1  
UniRef50_Q2J9B8 Cluster: ABC transporter related; n=17; Bacteria...    36   1.5  
UniRef50_A4RZY3 Cluster: Predicted protein; n=2; Ostreococcus|Re...    35   1.9  
UniRef50_Q62CB0 Cluster: ATP-dependent helicase, DEAD/DEAH famil...    34   3.4  
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    33   5.9  
UniRef50_Q57HV4 Cluster: ORF16-lacZ fusion protein; n=8; Bacteri...    33   5.9  
UniRef50_Q1JSU4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  

>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein - Vitis
           vinifera (Grape)
          Length = 347

 Score = 73.7 bits (173), Expect = 5e-12
 Identities = 37/51 (72%), Positives = 40/51 (78%)
 Frame = +1

Query: 298 AIIPHKRGIPSKRES*ARVDYVPALCTHRPSLLPIE*FSEVFGPTRGGFTA 450
           AI+  +RGIPSKR S ARVDYVPALCTHRPSLLPIE   EVFG  R G +A
Sbjct: 36  AIVGLQRGIPSKRXSLARVDYVPALCTHRPSLLPIEWSGEVFGSRRRGRSA 86


>UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 172

 Score = 72.9 bits (171), Expect = 8e-12
 Identities = 37/63 (58%), Positives = 41/63 (65%)
 Frame = +1

Query: 316 RGIPSKRES*ARVDYVPALCTHRPSLLPIE*FSEVFGPTRGGFTAVGVVGKLTKLDHLEE 495
           RG  S+ ES AR DYVPALCTHRPSLLPIE   E FG  +G +  +   GKL K  HLEE
Sbjct: 4   RGNNSRHESSARADYVPALCTHRPSLLPIEWLGEAFGLAQGSWQRLPRAGKLVKPGHLEE 63

Query: 496 VKV 504
             V
Sbjct: 64  NSV 66


>UniRef50_A5BUD3 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 143

 Score = 53.2 bits (122), Expect = 7e-06
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = +1

Query: 346 ARVDYVPALCTHRPSLLPIE*FSEVFG 426
           ARVDYVPALCTHRPSLLPIE   EVFG
Sbjct: 14  ARVDYVPALCTHRPSLLPIEWSGEVFG 40


>UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST1185 - Sulfolobus tokodaii
          Length = 109

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -2

Query: 404 SIGSSDGRCVQRAGT*STRAYDSRLLGIPRLWGIIANPNP 285
           S+G SDGRCVQ AGT S R  D RLLGIPR  G ++  +P
Sbjct: 36  SLGWSDGRCVQGAGTYSPRVVDPRLLGIPRSRGRVSALDP 75


>UniRef50_A4EB57 Cluster: Putative uncharacterized protein; n=6;
           Bacteria|Rep: Putative uncharacterized protein -
           Collinsella aerofaciens ATCC 25986
          Length = 160

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = +1

Query: 238 LPGLEAGQPAETPSCWGLGFAIIPHKRGIPSKRES*ARVDYVPALCTHRPSLLPIE*FSE 417
           +P  E  +  E+   +GLG A  PH+ G+ S R S  R + VP  CTHRPS  P     +
Sbjct: 86  MPPREGERIPESRPQFGLGAATRPHEVGVASNRGSACRGECVPGPCTHRPSHHPSRLHPK 145

Query: 418 VFGPTRGG 441
                RGG
Sbjct: 146 SPAQPRGG 153


>UniRef50_A0FH78 Cluster: Antifreeze protein; n=1; Saussurea
           involucrata|Rep: Antifreeze protein - Saussurea
           involucrata
          Length = 200

 Score = 42.7 bits (96), Expect = 0.010
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +2

Query: 320 EFLVSASHKLALITSLPFVHTARR 391
           EFLVSASH+LAL TSLPFVHT  R
Sbjct: 124 EFLVSASHQLALTTSLPFVHTRGR 147


>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
           n=4; Eukaryota|Rep: RRNA intron-encoded homing
           endonuclease - Oryza sativa (Rice)
          Length = 66

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 1   LKLKGIDGRAPPGVEPAA 54
           LKLKGIDGRAPPGVEPAA
Sbjct: 49  LKLKGIDGRAPPGVEPAA 66


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 1   LKLKGIDGRAPPGVEPAA 54
           LKLKGIDGRAPPGVEPAA
Sbjct: 55  LKLKGIDGRAPPGVEPAA 72


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 1   LKLKGIDGRAPPGVEPAA 54
           LKLKGIDGRAPPGVEPAA
Sbjct: 62  LKLKGIDGRAPPGVEPAA 79


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 39.1 bits (87), Expect = 0.12
 Identities = 26/64 (40%), Positives = 31/64 (48%)
 Frame = -2

Query: 542 NDPSAGSLRKPXXXXXXXXXXSLVNFPTTPTAVKPPRVGPKTSLNHSIGSSDGRCVQRAG 363
           NDPSAGS  +            +   P+    +K     P  S   SIG SDGRCVQRAG
Sbjct: 27  NDPSAGSPTETLLRLLLPLKDRIYG-PSKKIKIKFRFSCPNNSSYLSIGRSDGRCVQRAG 85

Query: 362 T*ST 351
           T S+
Sbjct: 86  THSS 89


>UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=1;
           Monodelphis domestica|Rep: PREDICTED: similar to Ac1147
           - Monodelphis domestica
          Length = 510

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +2

Query: 257 GNPLKLLRAGDWGLQLSPINEEFLVSAS 340
           GNPL  +R GD GLQL P+NEEF V  S
Sbjct: 27  GNPLNPIRDGDRGLQLFPMNEEFPVKDS 54


>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
           NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
           Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
           (Candida sphaerica)
          Length = 119

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -3

Query: 232 ADSFSVARVRPRTSKGITD 176
           A S SVARVRPRTSKGITD
Sbjct: 28  AGSVSVARVRPRTSKGITD 46


>UniRef50_Q2J9B8 Cluster: ABC transporter related; n=17;
           Bacteria|Rep: ABC transporter related - Frankia sp.
           (strain CcI3)
          Length = 631

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = +2

Query: 95  RATH*RRIKILLRGT-GVFEP-HEIEQ*QVCDALRCPGPHARYTEGISMFSLA*RPGNPL 268
           RA   RRI ++L+   G  +P   +EQ +V +ALR  GP AR   G  + +L  R G P 
Sbjct: 126 RALRGRRIGLVLQDALGSLDPLRRVEQ-EVDEALRAHGPVARAERGPRVVTLLARAGIPD 184

Query: 269 KLLRAGDWGLQLS-PINEEFLVSAS 340
             +RA  +  QLS  + +  L++A+
Sbjct: 185 PQVRARQYPHQLSGGLRQRVLIAAA 209


>UniRef50_A4RZY3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 644

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = -2

Query: 545 VNDPSAGSLRKPXXXXXXXXXXSLVNFPTTPTAVKPPRVGPKTSLNHSIGSSDGRCVQRA 366
           V++PSA  L+ P           L++ P  P+A KPP   PK    H+   ++     RA
Sbjct: 206 VSEPSA--LKTPPPKPKEPSTAMLMSPPPVPSAQKPPPPAPKAQTRHAAPPTNAPADPRA 263

Query: 365 GT*STRAYD 339
           G     AYD
Sbjct: 264 GAEYKVAYD 272


>UniRef50_Q62CB0 Cluster: ATP-dependent helicase, DEAD/DEAH family;
            n=32; Proteobacteria|Rep: ATP-dependent helicase,
            DEAD/DEAH family - Burkholderia mallei (Pseudomonas
            mallei)
          Length = 1598

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +1

Query: 391  LLPIE*FSEVFGPTRGGFTAVGVVGKLTKLDHLEEVKVVKGFRREPAEGSLTCV 552
            LLP+    E  G  RGG    G+ G+   L   + + +++  RR PAEG + CV
Sbjct: 1483 LLPVYRRLEARGEIRGGRFVAGLAGEQFALP--DAIPILRELRRRPAEGLMLCV 1534


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 551 LYCV*YVNI-LFIYLYIYTHAYIRSFLIFIVY 643
           +Y   Y+ I ++IY YIYTH YI ++L   +Y
Sbjct: 89  IYIYPYIYIYIYIYTYIYTHIYICTYLYIYIY 120


>UniRef50_Q57HV4 Cluster: ORF16-lacZ fusion protein; n=8;
           Bacteria|Rep: ORF16-lacZ fusion protein - Salmonella
           choleraesuis
          Length = 106

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 251 RPGNPLKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTAR 388
           R   P K+ R+ DW LQL  +  E LV       + T    VHTAR
Sbjct: 50  RASGPHKVRRSPDWSLQLDSMKLESLVIVDQNATVNTFPGLVHTAR 95


>UniRef50_Q1JSU4 Cluster: Putative uncharacterized protein; n=1;
           Toxoplasma gondii|Rep: Putative uncharacterized protein
           - Toxoplasma gondii
          Length = 766

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 505 VKGFRREPAEGSLTCVVLCVICKY-FIYLFIYIYACIH 615
           +KG      + +  C+ LC+I  Y +IY+++Y Y CI+
Sbjct: 719 MKGASIRRPQATEICMCLCIIYAYIYIYMYLYAYVCIY 756


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,747,546
Number of Sequences: 1657284
Number of extensions: 15180363
Number of successful extensions: 38466
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 35366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37709
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)