Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0691.Seq
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    29   0.022
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 29.5 bits (63), Expect = 0.022
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -1

Query: 315 SRISTAVIQLGL*SRAISSK-RPPSVYIAVATWSASDPRPG*SLLSPSGTEPRCC 154
           +R+     +L L +  IS K RPP V   + +W  S  RPG    +P    P  C
Sbjct: 499 NRVRKPTKKLHLKNSPISKKVRPPQVLCYITSW--SQKRPGAGKFTPEDINPSLC 551


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 141 TPAAAPYPTSTRTAAP 94
           +PAAAP P +T + +P
Sbjct: 29  SPAAAPPPATTSSGSP 44


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 415 VAHLLPVLVRGGRAVLLTNEKVEAVLC 335
           +AH    LVRG     +T E V  ++C
Sbjct: 382 LAHYFESLVRGDERFEITEEVVLGLVC 408


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 427 ELPRVAHLLPVLVRGGRAVLLT 362
           E+P V + L VL + GR+V L+
Sbjct: 894 EVPEVPYGLKVLDKSGRSVQLS 915


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 273 RAISSKRPPSVYIAVATWSASDPRPG*SLLSPSGTEP 163
           +  ++KRPPS  +    +++S  +     LSP  + P
Sbjct: 450 KTANNKRPPSTELGTNIYTSSKRQRTSPQLSPMSSLP 486


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 406 LLPVLVRGGRAVLLTNEKVEAVLCAQK 326
           L+ +L    R  +L NEKVEA+  + K
Sbjct: 581 LMSLLQSIKRRYVLLNEKVEAIKTSPK 607


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 150 SDCTPAAAPYPTSTRTAAP 94
           S  +PAAAP   +T T  P
Sbjct: 207 SKASPAAAPRSVATPTGIP 225


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 468 REPARMTLTMSPRWNC 421
           R  AR  +  +PRW C
Sbjct: 42  RRAARPGVVTTPRWGC 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,066
Number of Sequences: 336
Number of extensions: 2483
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)