Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0689.Seq
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 151 5e-37
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 150 1e-36
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 130 2e-30
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 105 3e-23
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 31 1.0
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 31 1.0
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 31 1.0
01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356 30 1.8
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 30 2.4
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 30 2.4
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 30 2.4
02_05_0597 + 30245455-30245767,30246693-30246760,30246851-302469... 29 3.1
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 29 5.4
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 5.4
08_02_0103 - 12400494-12400626,12400882-12400958 29 5.4
03_05_0620 - 26196597-26196841,26196929-26197020,26197118-26197296 29 5.4
12_02_1282 + 27528159-27529148,27529549-27529614 28 7.2
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 28 9.5
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 28 9.5
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 151 bits (367), Expect = 5e-37
Identities = 69/88 (78%), Positives = 73/88 (82%)
Frame = +1
Query: 253 EYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWD 432
+YNV IKCATITPDE RV+EF LK MWKSPNGTIRNIL GTVFRE IICKNIPRLV GW
Sbjct: 68 KYNVAIKCATITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLVPGWT 127
Query: 433 KPIIIGRHAHADQYKATDFVVPGAGILK 516
KPI IGRHA DQY+ATD V+ G G LK
Sbjct: 128 KPICIGRHAFGDQYRATDAVIKGPGKLK 155
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/86 (52%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 510 LEIIFKPESGEAIKHVVHEYKGAG-VALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTK 686
L+++++ + E I+ V + GAG VA +M+NTD SI FA +S A ++K+PLYLSTK
Sbjct: 154 LKLVYEGKD-EEIELEVFNFTGAGGVAQSMYNTDESIRSFAEASMATAYEKKWPLYLSTK 212
Query: 687 NTILKKYDGRFKDIFQDIYDREYKKR 764
NTILKKYDGRFKDIFQ++Y+ ++K +
Sbjct: 213 NTILKKYDGRFKDIFQEVYEAQWKSK 238
Score = 79.4 bits (187), Expect = 3e-15
Identities = 34/62 (54%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 SKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELNVYDLGMENRDKTDDQVTIDCA 241
+KIK A P+V++ GDEMTR+ W IK+KLI PFL++++ +DLG+ RD+TDD+VT++ A
Sbjct: 4 TKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAA 63
Query: 242 EA 247
EA
Sbjct: 64 EA 65
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 150 bits (363), Expect = 1e-36
Identities = 67/88 (76%), Positives = 74/88 (84%)
Frame = +1
Query: 253 EYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWD 432
+YNV IKCATITPDE RV+EF LK+MWKSPNGTIRNI+ GTVFRE IICKN+PRLV GW
Sbjct: 68 KYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVPRLVPGWT 127
Query: 433 KPIIIGRHAHADQYKATDFVVPGAGILK 516
KPI IGRHA DQY+ATD V+ G G LK
Sbjct: 128 KPICIGRHAFGDQYRATDAVLKGPGKLK 155
Score = 94.3 bits (224), Expect = 1e-19
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +3
Query: 510 LEIIFKPESGEAIKHVVHEYKGAG-VALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTK 686
L+++F+ + E I V + GAG VAL+M+NTD SI FA +S A ++K+PLYLSTK
Sbjct: 154 LKLVFEGKD-EQIDLEVFNFTGAGGVALSMYNTDESIRAFAEASMTTAYEKKWPLYLSTK 212
Query: 687 NTILKKYDGRFKDIFQDIYDREYKKR 764
NTILKKYDGRFKDIFQ++Y+ +K +
Sbjct: 213 NTILKKYDGRFKDIFQEVYEAGWKSK 238
Score = 82.2 bits (194), Expect = 4e-16
Identities = 37/61 (60%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 KIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELNVYDLGMENRDKTDDQVTIDCAE 244
KIK A P+V++ GDEMTRI W IK+KLI PFLD+++ YDLG+ +RD TDD+VT++ AE
Sbjct: 5 KIKVANPIVEMDGDEMTRIFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTVEAAE 64
Query: 245 A 247
A
Sbjct: 65 A 65
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 130 bits (313), Expect = 2e-30
Identities = 68/106 (64%), Positives = 72/106 (67%), Gaps = 18/106 (16%)
Frame = +1
Query: 253 EYNVGIKCATITP------------------DEKRVEEFKLKKMWKSPNGTIRNILGGTV 378
+YNV IKCATITP DE RV+EF L MWKSPNGTIRNIL GTV
Sbjct: 93 KYNVAIKCATITPVLDTQFKFDFGRTIHEPTDEGRVKEFNLSAMWKSPNGTIRNILNGTV 152
Query: 379 FREAIICKNIPRLVTGWDKPIIIGRHAHADQYKATDFVVPGAGILK 516
FRE IICKNIPRLV GW KPI IGRHA DQY+ATD V+ G G LK
Sbjct: 153 FREPIICKNIPRLVPGWIKPICIGRHAFGDQYRATDTVIKGPGKLK 198
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +3
Query: 510 LEIIFKPESGEAIKHVVHEYKGAG-VALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTK 686
L+++F E I+ V + GAG VAL+M+NTD SI FA +S A +++PLYLSTK
Sbjct: 197 LKLVFDGRE-EQIELDVFNFTGAGGVALSMYNTDESIWAFAEASMNMAYQKRWPLYLSTK 255
Query: 687 NTILKKYDGRFKDIFQDIYDREYKKR 764
NTILKKYDGRFKDIFQ+ Y+ +++ +
Sbjct: 256 NTILKKYDGRFKDIFQENYETKWRAK 281
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +2
Query: 101 GDEMTRIIWDLIKEKLILPFLDIELNVYDLGMENRDKTDDQVTIDCAEA 247
GDEMTR+IW IK+KLI PFLD+++ YDLG+ NRD T D+VTI+ AEA
Sbjct: 42 GDEMTRVIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTIESAEA 90
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 105 bits (253), Expect = 3e-23
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +3
Query: 516 IIFKPESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTI 695
I+ P+ E ++ V+ +KG GVAL+M+N D SI FA SS AL +K+PLYLSTKNTI
Sbjct: 190 ILSVPDGAEPVELNVYNFKGPGVALSMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTI 249
Query: 696 LKKYDGRFKDIFQDIYDREYKKR 764
LKKYDGRFKDIFQ++Y+ ++K++
Sbjct: 250 LKKYDGRFKDIFQEVYEEKWKEK 272
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +1
Query: 280 TITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 423
T+T DE RV+EFKLK MW+SPNGTIRNIL GTVFRE I+CKN+PR+++
Sbjct: 146 TLT-DETRVKEFKLKSMWRSPNGTIRNILNGTVFREPILCKNVPRILS 192
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +2
Query: 140 EKLILPFLDIELNVYDLGMENRDKTDDQVTIDCAEA 247
+ LI P+L++++ +DLG+ NRD TDD+VT++ AEA
Sbjct: 99 DDLIFPYLELDVKYFDLGLLNRDATDDKVTVESAEA 134
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D S K +R Y S + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIK 215
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 216 EKLAYVALD-YEQE 228
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D S K +R Y S + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIK 215
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 216 EKLAYVALD-YEQE 228
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D S K +R Y S + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIK 215
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 216 EKLAYVALD-YEQE 228
>01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356
Length = 354
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 378 FQGGYYLQEYTETCNRVGQTHHHWTSCSC*SIQSN*LCCPRCWYLEII 521
F GY +Y + + + Q + H TSCS I + P C + EI+
Sbjct: 288 FYVGYSAWDYDQLLSEIDQGYWHVTSCSSGLISDSLATDPSCLWTEIL 335
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D S K +R Y + + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIK 215
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 216 EKLAYVALD-YEQE 228
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D K +R Y L S + I++
Sbjct: 155 DSGDGVSHTVPIYEGYTLPHAILRLDLAGRDLTDHLMKILTERGYSLTTSAEREIVRDIK 214
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 215 EKLAYVALD-YEQE 227
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMK 215
Query: 711 GRFKDIFQDIYDRE 752
+ I D YD+E
Sbjct: 216 EKLSYIALD-YDQE 228
>02_05_0597 +
30245455-30245767,30246693-30246760,30246851-30246939,
30247047-30247212,30247296-30247585,30247692-30247896,
30248013-30248170,30248352-30248595
Length = 510
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3
Query: 434 LSHPVTSLGIFLQIIASLKTVPPRILRMVPLGLFH 330
+ H +TSL ++I L+ +PPR+ R V LG+FH
Sbjct: 165 VEHFITSLRDEVRI---LRELPPRVKRRVELGMFH 196
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D + K +R Y + + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIK 215
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 216 EKLAYVALD-YEQE 228
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 316 KLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDK 435
K++ W+ P I VFR NIP TGWDK
Sbjct: 69 KMEAFWRVPKWKIEKAKVKVVFRLQFHATNIPS--TGWDK 106
>08_02_0103 - 12400494-12400626,12400882-12400958
Length = 69
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 116 WSFHHQGCQQQVQP 75
WS HHQGCQ + P
Sbjct: 12 WSLHHQGCQPRALP 25
>03_05_0620 - 26196597-26196841,26196929-26197020,26197118-26197296
Length = 171
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 528 PESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFAL 653
P SG A+KH + GAGV A + +I F HS FA+
Sbjct: 92 PRSGLALKHSIDV--GAGVIDADYRGPVGVILFNHSDTDFAV 131
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDVK 215
Query: 711 GRFKDIFQDIYDRE 752
+ I D +D+E
Sbjct: 216 EKLSYIALD-FDQE 228
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 153 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIK 212
Query: 711 GRFKDIFQDIYDRE 752
+ I D Y++E
Sbjct: 213 EKLAYIALD-YEQE 225
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = +3
Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYD 710
+SG+ + H V Y+G + A+ D + D + K +R Y + + I++
Sbjct: 155 DSGDGVSHTVPIYEGFTLPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDIK 214
Query: 711 GRFKDIFQDIYDRE 752
+ + D Y++E
Sbjct: 215 EKLAYVALD-YEQE 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,275,292
Number of Sequences: 37544
Number of extensions: 423371
Number of successful extensions: 1008
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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